Jatropha Genome Database

JcCB0050531.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050531.20 - phase: 0 
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g17410.1                                                       339   2e-93
Glyma11g01210.1                                                       334   6e-92
Glyma02g08970.1                                                        86   3e-17
Glyma02g08950.1                                                        83   3e-16
Glyma11g11780.1                                                        73   4e-13
Glyma11g11780.3                                                        72   4e-13
Glyma11g11780.2                                                        72   5e-13
Glyma14g04780.2                                                        53   4e-07
Glyma14g04780.1                                                        53   4e-07
Glyma02g44090.2                                                        52   7e-07
Glyma02g44090.1                                                        52   7e-07

>Glyma07g17410.1 
          Length = 263

 Score =  339 bits (870), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 163/261 (62%), Positives = 201/261 (77%), Gaps = 3/261 (1%)

Query: 3   FSDQNLFDYSLLAFYLIGPPTFISLRFLQAPYGKHNRPGWGPTIFPPLAWFLMESXXXXX 62
           +SD +LF  SLL  +LI PPTF+SL FLQAPYGKH+RPGWGP + PPLAW LMES     
Sbjct: 6   YSDSSLFHSSLLTLFLIAPPTFLSLTFLQAPYGKHHRPGWGPNLPPPLAWLLMESPTLWL 65

Query: 63  XXXXXXXGQHATNFKALILMSPYIIHYFHRTCIYPLRLYLNASQQNTKAASGFPVSVALI 122
                  G H+ N KA  L++P++IHYF+RT +YPL L L  S++ T    GFP+SVAL+
Sbjct: 66  TLLLFPLGLHSHNPKAQALITPFLIHYFNRTILYPLHLLLTPSKKTTP---GFPLSVALM 122

Query: 123 AFGFNLLNAYLQSRWVSHYKDDYDSDGWFWWKFIGGLFVFIWGMWINIWSDRVLVGLKRQ 182
           AF FN+LN+YLQ+R VSHY + YD  G+FW++F+ GL VF+ GM IN+W+DRVL+ LK +
Sbjct: 123 AFAFNVLNSYLQARTVSHYNNHYDDSGFFWFRFLCGLLVFLLGMGINVWADRVLLRLKSE 182

Query: 183 GGGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFLYTCANLVPRAHANHKW 242
           G GY VPRGG FELV+CPNYFGEIVEW+GW++MTWSW G GFF+YT ANL PRA AN +W
Sbjct: 183 GKGYVVPRGGLFELVACPNYFGEIVEWLGWAVMTWSWAGLGFFVYTFANLGPRARANRRW 242

Query: 243 YQDKFGEDYPKSRKAVIPFLY 263
           Y +KFGEDYPK RKAVIP+LY
Sbjct: 243 YLEKFGEDYPKERKAVIPYLY 263


>Glyma11g01210.1 
          Length = 263

 Score =  334 bits (857), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 161/261 (61%), Positives = 199/261 (76%), Gaps = 3/261 (1%)

Query: 3   FSDQNLFDYSLLAFYLIGPPTFISLRFLQAPYGKHNRPGWGPTIFPPLAWFLMESXXXXX 62
           +SD +LF  SLL  +LI PPTF+SL FLQAPYGKH+RPGWGP + PPLAW  MES     
Sbjct: 6   YSDSSLFHRSLLTLFLIAPPTFLSLTFLQAPYGKHHRPGWGPNLPPPLAWLFMESPTLWL 65

Query: 63  XXXXXXXGQHATNFKALILMSPYIIHYFHRTCIYPLRLYLNASQQNTKAASGFPVSVALI 122
                  G H+ N KA  L++P++IHYF+RT +YPL L L  S+   K  +GFP+ VAL+
Sbjct: 66  TLLLFPLGLHSHNPKAQALITPFLIHYFNRTILYPLHLLLTPSK---KTPTGFPLGVALM 122

Query: 123 AFGFNLLNAYLQSRWVSHYKDDYDSDGWFWWKFIGGLFVFIWGMWINIWSDRVLVGLKRQ 182
           AF FN+LN+YLQ+R VSHY + YD  G+FW++F+ GL VF+ GM IN+W+DRVL+ LK +
Sbjct: 123 AFAFNVLNSYLQARTVSHYINHYDDSGFFWFRFLCGLLVFLLGMGINVWADRVLLRLKSE 182

Query: 183 GGGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFLYTCANLVPRAHANHKW 242
           G GY VPRGG FELV+CPNYFGEIVEW+GW++MTWSW G GFF+YT ANL PRA AN +W
Sbjct: 183 GKGYVVPRGGLFELVACPNYFGEIVEWLGWAVMTWSWAGLGFFVYTFANLGPRARANRRW 242

Query: 243 YQDKFGEDYPKSRKAVIPFLY 263
           Y +KFGEDYPK RKAVIP+LY
Sbjct: 243 YLEKFGEDYPKERKAVIPYLY 263


>Glyma02g08970.1 
          Length = 266

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 69/107 (64%), Gaps = 2/107 (1%)

Query: 158 GLFVFIWGMWINIWSDRVLVGLKRQGGG-YKVPRGGWFELVSCPNYFGEIVEWVGWSLMT 216
           G+ +F+ G+  N +   +L  L+ +G   YK+P+GG FELV CP+Y  EI+E+ G+S ++
Sbjct: 161 GIVLFVVGIIGNFYHHYLLSNLRGKGEKEYKIPKGGMFELVICPHYLFEIIEFYGFSFIS 220

Query: 217 WSWVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFLY 263
            +   F F + T   L+ R+++  KWY  KF ED+P+  KA+IPF++
Sbjct: 221 QTLYAFSFTVGTTLYLLGRSYSTRKWYLSKF-EDFPEHVKAIIPFVF 266


>Glyma02g08950.1 
          Length = 266

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 2/110 (1%)

Query: 155 FIGGLFVFIWGMWINIWSDRVLVGLKRQGGG-YKVPRGGWFELVSCPNYFGEIVEWVGWS 213
           F  G+ +F+ G+  N +   +L  L+ +G   YK+P+GG+FELV CP+YF EI  + G  
Sbjct: 158 FYPGIVLFLVGIIGNFYHHYLLSKLRGKGEKEYKIPKGGFFELVICPHYFFEITVFYGIF 217

Query: 214 LMTWSWVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFLY 263
            ++ +   F F + T   LV R+++  KWY  KF ED+PK  KAVIPF++
Sbjct: 218 FISQTLYSFAFAVGTTMYLVGRSYSTRKWYLSKF-EDFPKHVKAVIPFVF 266


>Glyma11g11780.1 
          Length = 342

 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 17/152 (11%)

Query: 126 FNLLNAYLQSRWVSHYKDDYDSDGWFWWKFIGGLF-----------VFIWGMWINIWSDR 174
           FN L A L + ++   K+        +W+ +  LF           VF+WG        +
Sbjct: 192 FNFL-ANLVTEFIVKGKNQMQVTELEFWQVVNPLFKLGWKHWIGAAVFLWGWIHQHQCHK 250

Query: 175 VLVGLK--RQGGGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMT--WSWVGFGFFLYTCA 230
           +L  L+  RQ   Y +P G WFE+VS P+Y  EIV +  + + T   +   +  F++  A
Sbjct: 251 ILGSLRHSRQADEYVIPHGDWFEIVSSPHYLSEIVIYASFVVATGGSNLTIWLLFVFVVA 310

Query: 231 NLVPRAHANHKWYQDKFGEDYPKSRKAVIPFL 262
           NL   A   H WY+ KF EDYP SR A+IPF+
Sbjct: 311 NLSFAAVETHGWYRQKF-EDYPSSRFAIIPFI 341


>Glyma11g11780.3 
          Length = 276

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 17/152 (11%)

Query: 126 FNLLNAYLQSRWVSHYKDDYDSDGWFWWKFIGGLF-----------VFIWGMWINIWSDR 174
           FN L A L + ++   K+        +W+ +  LF           VF+WG        +
Sbjct: 126 FNFL-ANLVTEFIVKGKNQMQVTELEFWQVVNPLFKLGWKHWIGAAVFLWGWIHQHQCHK 184

Query: 175 VLVGLK--RQGGGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMT--WSWVGFGFFLYTCA 230
           +L  L+  RQ   Y +P G WFE+VS P+Y  EIV +  + + T   +   +  F++  A
Sbjct: 185 ILGSLRHSRQADEYVIPHGDWFEIVSSPHYLSEIVIYASFVVATGGSNLTIWLLFVFVVA 244

Query: 231 NLVPRAHANHKWYQDKFGEDYPKSRKAVIPFL 262
           NL   A   H WY+ KF EDYP SR A+IPF+
Sbjct: 245 NLSFAAVETHGWYRQKF-EDYPSSRFAIIPFI 275


>Glyma11g11780.2 
          Length = 248

 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 5/114 (4%)

Query: 153 WKFIGGLFVFIWGMWINIWSDRVLVGLK--RQGGGYKVPRGGWFELVSCPNYFGEIVEWV 210
           WK   G  VF+WG        ++L  L+  RQ   Y +P G WFE+VS P+Y  EIV + 
Sbjct: 135 WKHWIGAAVFLWGWIHQHQCHKILGSLRHSRQADEYVIPHGDWFEIVSSPHYLSEIVIYA 194

Query: 211 GWSLMT--WSWVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFL 262
            + + T   +   +  F++  ANL   A   H WY+ KF EDYP SR A+IPF+
Sbjct: 195 SFVVATGGSNLTIWLLFVFVVANLSFAAVETHGWYRQKF-EDYPSSRFAIIPFI 247


>Glyma14g04780.2 
          Length = 309

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 158 GLFVFIWGMWINIWSDRVLVGLKRQGG--GYKVPRGGWFELVSCPNYFGEIVEWVGWSLM 215
           G  + I     N +   +L  L+  GG  GY++PRG  F +V+C NY  EI +W+G+++ 
Sbjct: 198 GFAIGILCQISNFYCHIILKNLRSPGGEGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIA 257

Query: 216 TWSWVGFGFFLYTCANLVPRAHANHKWYQDKF-GED----YPKSRKAVIPFL 262
           T +  G+ F +     +   A A H+  +  F G++    YP+    + PFL
Sbjct: 258 TQTVAGYIFLVVATFIMTNWALAKHRRLKKLFDGKEGRPRYPRRWVTLPPFL 309


>Glyma14g04780.1 
          Length = 309

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 158 GLFVFIWGMWINIWSDRVLVGLKRQGG--GYKVPRGGWFELVSCPNYFGEIVEWVGWSLM 215
           G  + I     N +   +L  L+  GG  GY++PRG  F +V+C NY  EI +W+G+++ 
Sbjct: 198 GFAIGILCQISNFYCHIILKNLRSPGGEGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIA 257

Query: 216 TWSWVGFGFFLYTCANLVPRAHANHKWYQDKF-GED----YPKSRKAVIPFL 262
           T +  G+ F +     +   A A H+  +  F G++    YP+    + PFL
Sbjct: 258 TQTVAGYIFLVVATFIMTNWALAKHRRLKKLFDGKEGRPRYPRRWVTLPPFL 309


>Glyma02g44090.2 
          Length = 309

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 169 NIWSDRVLVGLKRQGG--GYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFL 226
           N +   +L  L+  GG  GY++PRG  F +V+C NY  EI +W+G+++ T +  G+ F +
Sbjct: 209 NFYCHIILKNLRSPGGEGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYIFLV 268

Query: 227 YTCANLVPRAHANHKWYQDKF-GED----YPKSRKAVIPFL 262
                +   A A H+  +  F G++    YP+    + PFL
Sbjct: 269 VATFIMTNWALAKHRRLKKLFDGKEGRPRYPRRWVILPPFL 309


>Glyma02g44090.1 
          Length = 309

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 169 NIWSDRVLVGLKRQGG--GYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFL 226
           N +   +L  L+  GG  GY++PRG  F +V+C NY  EI +W+G+++ T +  G+ F +
Sbjct: 209 NFYCHIILKNLRSPGGEGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYIFLV 268

Query: 227 YTCANLVPRAHANHKWYQDKF-GED----YPKSRKAVIPFL 262
                +   A A H+  +  F G++    YP+    + PFL
Sbjct: 269 VATFIMTNWALAKHRRLKKLFDGKEGRPRYPRRWVILPPFL 309