Jatropha Genome Database

JcCB0050531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050531.10 + phase: 0 /partial
         (356 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g42300.1                                                       142   8e-34
Glyma18g42280.1                                                       140   1e-33
Glyma18g42310.1                                                       137   2e-32
Glyma18g42310.2                                                       135   8e-32

>Glyma18g42300.1 
          Length = 690

 Score =  142 bits (357), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/273 (36%), Positives = 146/273 (53%), Gaps = 38/273 (13%)

Query: 29  QQIXXXXXXXXXXXXLALNEMIEKLKREIDLEFSEAVKAMGFKDRFATLREEFLKANSQD 88
           QQ+            L L+EM+++L RE+DLE+SEAVKA G  D    LREE  KAN+ +
Sbjct: 439 QQVLEAKESSPVPPKLDLDEMLKQLTREVDLEYSEAVKATGLTDSLLKLREEVSKANADN 498

Query: 89  QLMHPGLMDKIEKLKNEFTQGLSAAPNFPSLKYKLDMLKEFSKAKNISE--KNSKGLTLK 146
           Q++ P L DKIEKL+ EF Q L AAPN+  L+ K   L E  K K +S+  K+++ +T K
Sbjct: 499 QIVDPLLKDKIEKLRVEFEQQLRAAPNYGRLQNKFTYLSELCKVKLLSDANKDNEAVTFK 558

Query: 147 QEINKKLKEVMDQPDMKEKMEALEAEVLRSGAYNEGELDXXXXXXXXXXXXXXXXXLANV 206
           QE+ KK+   +  P ++E  EAL+AE+  +GA +  +LD                     
Sbjct: 559 QELEKKVDNALSNPKIRETFEALKAEIKGAGASSASDLDDE------------------- 599

Query: 207 FKSLGLEVEIVKSKAKELGEQTPLLDFKAKVENLKEQTNKKIEGLINSS-DLKNMIELLK 265
                     +K K  E      +++ K +V+ +KE    +IE L+NSS D+KN +  LK
Sbjct: 600 ----------LKKKIVEF-----MIELK-EVKEVKEVIENQIESLVNSSDDIKNKVLQLK 643

Query: 266 LEVAKAGNKPDVTSKNKIEALEHQIKQRLSSAI 298
           LEV KAG  PD  SK++I     +   R+  AI
Sbjct: 644 LEVPKAGETPDSESKSRIGDFIFRTSSRIIMAI 676


>Glyma18g42280.1 
          Length = 709

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/276 (37%), Positives = 148/276 (53%), Gaps = 38/276 (13%)

Query: 29  QQIXXXXXXXXXXXXLALNEMIEKLKREIDLEFSEAVKAMGFKDRFATLREEFLKANSQD 88
           QQ+            L L+EM+++L RE+DLE+SEAVKA G  D    LREE  KAN+ +
Sbjct: 439 QQVLEAKESSPVPPKLDLDEMLKQLAREVDLEYSEAVKATGLTDSLLKLREEVSKANADN 498

Query: 89  QLMHPGLMDKIEKLKNEFTQGLSAAPNFPSLKYKLDMLKEFSKAKNISE--KNSKGLTLK 146
           Q++ P L  KIEKL+ EF Q L AAPN+  L+ KL+ L E  K K +S+  K+++ +T K
Sbjct: 499 QIVDPLLEGKIEKLRVEFEQQLRAAPNYGRLQNKLNYLSELCKVKLLSDGKKDNEAVTFK 558

Query: 147 QEINKKLKEVMDQPDMKEKMEALEAEVLRSGAYNEGELDXXXXXXXXXXXXXXXXXLANV 206
           QE+ KK+   +  P ++E  EAL+AE+   GA +  +LD                     
Sbjct: 559 QELKKKIDNALSDPKIRETFEALKAEIKGVGASSASDLDD-------------------- 598

Query: 207 FKSLGLEVEIVKSKAKELGEQTPLLDFKAKVENLKEQTNKKIEGLINSS-DLKNMIELLK 265
                   E+ K   + + E   + + K  +EN       +IE L+NSS D+K+ I  LK
Sbjct: 599 --------ELKKKIIEFIKEVKEVKEVKEVIEN-------QIESLVNSSDDIKSKILQLK 643

Query: 266 LEVAKAGNKPDVTSKNKIEALEHQIKQRLSSAINST 301
           LEV KAG  PD   KN+I AL   IK  L  A++S+
Sbjct: 644 LEVPKAGETPDSEPKNRIGALVQLIKPSLVEAVDSS 679


>Glyma18g42310.1 
          Length = 893

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 137/259 (52%), Gaps = 38/259 (14%)

Query: 29  QQIXXXXXXXXXXXXLALNEMIEKLKREIDLEFSEAVKAMGFKDRFATLREEFLKANSQD 88
           QQ+            L L+EM+++L RE+ LE+SEAVKA G  D    LREE  KAN+  
Sbjct: 665 QQVLEAKESSPVPPKLDLDEMLKQLAREVGLEYSEAVKATGLTDSLLKLREEVSKANADS 724

Query: 89  QLMHPGLMDKIEKLKNEFTQGLSAAPNFPSLKYKLDMLKEFSKAKNISE--KNSKGLTLK 146
           Q++ P L DKIEKL+ EF Q L AAPN+  L+ K   L E  K K +S+  K+++ +T K
Sbjct: 725 QIVDPLLKDKIEKLRVEFEQQLRAAPNYGRLQNKFKYLSELCKVKLLSDANKDNQAVTFK 784

Query: 147 QEINKKLKEVMDQPDMKEKMEALEAEVLRSGAYNEGELDXXXXXXXXXXXXXXXXXLANV 206
           QE+ KK+   +  P ++E  EAL+AE+  +GA +  +LD                     
Sbjct: 785 QELEKKVDNALSDPKIRETFEALKAEIKGAGASSASDLDDELKK---------------- 828

Query: 207 FKSLGLEVEIVKSKAKELGEQTPLLDFKAKVENLKEQTNKKIEGLINSS-DLKNMIELLK 265
            K +G  +E+                   +V+ +KE    +IE L+NSS D+K+ I  LK
Sbjct: 829 -KIVGFMIEL------------------KEVKEVKEVIENQIESLVNSSDDIKSKILQLK 869

Query: 266 LEVAKAGNKPDVTSKNKIE 284
           LE+ KAG  PD  S N+IE
Sbjct: 870 LELPKAGETPDSESNNRIE 888


>Glyma18g42310.2 
          Length = 683

 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 136/258 (52%), Gaps = 38/258 (14%)

Query: 29  QQIXXXXXXXXXXXXLALNEMIEKLKREIDLEFSEAVKAMGFKDRFATLREEFLKANSQD 88
           QQ+            L L+EM+++L RE+ LE+SEAVKA G  D    LREE  KAN+  
Sbjct: 439 QQVLEAKESSPVPPKLDLDEMLKQLAREVGLEYSEAVKATGLTDSLLKLREEVSKANADS 498

Query: 89  QLMHPGLMDKIEKLKNEFTQGLSAAPNFPSLKYKLDMLKEFSKAKNISE--KNSKGLTLK 146
           Q++ P L DKIEKL+ EF Q L AAPN+  L+ K   L E  K K +S+  K+++ +T K
Sbjct: 499 QIVDPLLKDKIEKLRVEFEQQLRAAPNYGRLQNKFKYLSELCKVKLLSDANKDNQAVTFK 558

Query: 147 QEINKKLKEVMDQPDMKEKMEALEAEVLRSGAYNEGELDXXXXXXXXXXXXXXXXXLANV 206
           QE+ KK+   +  P ++E  EAL+AE+  +GA +  +LD                     
Sbjct: 559 QELEKKVDNALSDPKIRETFEALKAEIKGAGASSASDLDDELKK---------------- 602

Query: 207 FKSLGLEVEIVKSKAKELGEQTPLLDFKAKVENLKEQTNKKIEGLINSS-DLKNMIELLK 265
            K +G  +E+                   +V+ +KE    +IE L+NSS D+K+ I  LK
Sbjct: 603 -KIVGFMIEL------------------KEVKEVKEVIENQIESLVNSSDDIKSKILQLK 643

Query: 266 LEVAKAGNKPDVTSKNKI 283
           LE+ KAG  PD  S N+I
Sbjct: 644 LELPKAGETPDSESNNRI 661