Jatropha Genome Database

JcCB0049771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0049771.10 - phase: 0 
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g30100.1                                                        87   1e-17
Glyma08g07220.1                                                        86   2e-17
Glyma13g32970.1                                                        77   2e-14
Glyma13g32970.2                                                        77   2e-14
Glyma04g35330.1                                                        53   2e-07

>Glyma07g30100.1 
          Length = 695

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 49/74 (66%)

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           +DEQER++S LKSQL+ AV  EDYE              NDSVG VMS LNRA+ EE Y 
Sbjct: 109 IDEQERLLSTLKSQLSRAVYLEDYEDAARLKVAFAAAANNDSVGRVMSYLNRAIKEERYG 168

Query: 188 DAAFLRDNAGAGLV 201
           DAAFLRD AG GLV
Sbjct: 169 DAAFLRDKAGTGLV 182


>Glyma08g07220.1 
          Length = 674

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 50/74 (67%)

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           +DEQER++S+ KSQL+ AV  E+YE              NDSVG VMS LNRA+ EE Y 
Sbjct: 110 IDEQERLLSIFKSQLSRAVYLENYEDAARLKVAFAATANNDSVGRVMSYLNRAIKEERYG 169

Query: 188 DAAFLRDNAGAGLV 201
           DAAFLRD AGAGLV
Sbjct: 170 DAAFLRDKAGAGLV 183


>Glyma13g32970.1 
          Length = 632

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 46/74 (62%)

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           VDEQE ++ +LKS+L  A+  EDYE             T D+VGT +S L RA+ EE Y 
Sbjct: 72  VDEQELLLDILKSRLGDALRLEDYEDAATLKVAIATVATKDTVGTAISHLKRAIEEERYS 131

Query: 188 DAAFLRDNAGAGLV 201
           DAAFLRD AG GLV
Sbjct: 132 DAAFLRDEAGTGLV 145


>Glyma13g32970.2 
          Length = 631

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 46/74 (62%)

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           VDEQE ++ +LKS+L  A+  EDYE             T D+VGT +S L RA+ EE Y 
Sbjct: 72  VDEQELLLDILKSRLGDALRLEDYEDAATLKVAIATVATKDTVGTAISHLKRAIEEERYS 131

Query: 188 DAAFLRDNAGAGLV 201
           DAAFLRD AG GLV
Sbjct: 132 DAAFLRDEAGTGLV 145


>Glyma04g35330.1 
          Length = 632

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           +++ E   SVLK QL+ A+ +ED+E             + D+V  +M QL  A+ +E Y 
Sbjct: 80  IEQAENFASVLKFQLDDAIEKEDFEEAVKLNRALSEATSKDTVAEIMDQLKSAIDDERYH 139

Query: 188 DAAFLRDNAGAGLV 201
           DA+ L    G+GLV
Sbjct: 140 DASRLCKCTGSGLV 153