Jatropha Genome Database

JcCB0049381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0049381.10 + phase: 1 /partial
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g09750.1                                                       263   4e-71
Glyma11g18620.1                                                       261   2e-70

>Glyma12g09750.1 
          Length = 350

 Score =  263 bits (673), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 124/143 (86%), Positives = 132/143 (92%)

Query: 1   VEIYCAPTADARNTWQATITHIALEGSCFVLSANQFCRRKDYPPPPEYVFAGTEEELTPD 60
           VEIYCAPTADAR+ WQA++THIALEG CFVLSANQFCRR+DYPPPPEYVFAGTE +LTPD
Sbjct: 208 VEIYCAPTADARDVWQASMTHIALEGGCFVLSANQFCRRRDYPPPPEYVFAGTEVDLTPD 267

Query: 61  SVVCAGGSAIISPLGTVLAGPNFDGEALISADLDLGDIPRAKFDFDVVGHYSRPEVLSLT 120
           SVVCAGGS IISPLG VLAGPN+DGEALISADLDLG+I RAKFDFDVVGHYSRPEVLSLT
Sbjct: 268 SVVCAGGSVIISPLGAVLAGPNYDGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLT 327

Query: 121 VKDHPTNAVTFTSATAKIEDSHK 143
           VKDHPTN VTFTS + KIED  K
Sbjct: 328 VKDHPTNPVTFTSTSTKIEDKTK 350


>Glyma11g18620.1 
          Length = 350

 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 123/143 (86%), Positives = 131/143 (91%)

Query: 1   VEIYCAPTADARNTWQATITHIALEGSCFVLSANQFCRRKDYPPPPEYVFAGTEEELTPD 60
           VEIYCAPTAD+R+ WQA++THIALEG CFVLSANQFCRRKDYPPPPEYVFAGTEE+LTPD
Sbjct: 208 VEIYCAPTADSRDVWQASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVFAGTEEDLTPD 267

Query: 61  SVVCAGGSAIISPLGTVLAGPNFDGEALISADLDLGDIPRAKFDFDVVGHYSRPEVLSLT 120
           SVVCAGGS IISP G VLAGPN+DGEALISADLDLG+I RAKFDFDVVGHYSRPEVLSL 
Sbjct: 268 SVVCAGGSVIISPSGAVLAGPNYDGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLI 327

Query: 121 VKDHPTNAVTFTSATAKIEDSHK 143
           VKDHPTN VTFTS + KIED  K
Sbjct: 328 VKDHPTNPVTFTSTSTKIEDKTK 350