Jatropha Genome Database

JcCB0047491.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0047491.20 + phase: 0 /partial
         (319 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g07410.1                                                       490   e-139
Glyma19g07410.2                                                       489   e-138
Glyma19g23190.1                                                       424   e-119
Glyma05g24070.1                                                       417   e-117
Glyma01g23710.1                                                       176   3e-44
Glyma02g38310.1                                                       107   2e-23
Glyma16g07270.1                                                        94   2e-19
Glyma19g31730.1                                                        62   1e-09
Glyma10g15900.1                                                        57   3e-08
Glyma03g28970.1                                                        53   5e-07

>Glyma19g07410.1 
          Length = 380

 Score =  490 bits (1262), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 234/267 (87%), Positives = 253/267 (94%)

Query: 33  AFHMSKVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTN 92
           A H SKVTV+GSGNWGSVAAKLIASNTL+L+SFHDEVRMWV+EE L SGEKLTDVINRTN
Sbjct: 28  ATHRSKVTVIGSGNWGSVAAKLIASNTLRLSSFHDEVRMWVYEETLLSGEKLTDVINRTN 87

Query: 93  ENVKYLPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISL 152
           ENVKYLPGIKLGKNVVADPDL++AV+D+NMLVFVTPHQFMEGICKRLVGKI+E  EAISL
Sbjct: 88  ENVKYLPGIKLGKNVVADPDLESAVKDSNMLVFVTPHQFMEGICKRLVGKIREDAEAISL 147

Query: 153 IKGMEVKMEGPCMISSLISSQLRVNCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKW 212
           +KGMEVKMEGPCMISSLIS QL +NC VLMGANIANEIAVEKFSEATVGY+ NRE+AE+W
Sbjct: 148 VKGMEVKMEGPCMISSLISQQLGINCSVLMGANIANEIAVEKFSEATVGYRLNREVAERW 207

Query: 213 VQLFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLREMRA 272
           VQLF T YF+VT VQDVEGVELCGTLKNVVA+AAGFVDGLEMGNNTKAAIMR+GLREM+A
Sbjct: 208 VQLFYTHYFIVTAVQDVEGVELCGTLKNVVAIAAGFVDGLEMGNNTKAAIMRLGLREMKA 267

Query: 273 FSKLLFSSVKDSTFFESCGVADVITTC 299
           FSKLLF SVKDSTFFESCGVAD+ITTC
Sbjct: 268 FSKLLFPSVKDSTFFESCGVADLITTC 294


>Glyma19g07410.2 
          Length = 334

 Score =  489 bits (1259), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/267 (87%), Positives = 253/267 (94%)

Query: 33  AFHMSKVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTN 92
           A H SKVTV+GSGNWGSVAAKLIASNTL+L+SFHDEVRMWV+EE L SGEKLTDVINRTN
Sbjct: 28  ATHRSKVTVIGSGNWGSVAAKLIASNTLRLSSFHDEVRMWVYEETLLSGEKLTDVINRTN 87

Query: 93  ENVKYLPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISL 152
           ENVKYLPGIKLGKNVVADPDL++AV+D+NMLVFVTPHQFMEGICKRLVGKI+E  EAISL
Sbjct: 88  ENVKYLPGIKLGKNVVADPDLESAVKDSNMLVFVTPHQFMEGICKRLVGKIREDAEAISL 147

Query: 153 IKGMEVKMEGPCMISSLISSQLRVNCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKW 212
           +KGMEVKMEGPCMISSLIS QL +NC VLMGANIANEIAVEKFSEATVGY+ NRE+AE+W
Sbjct: 148 VKGMEVKMEGPCMISSLISQQLGINCSVLMGANIANEIAVEKFSEATVGYRLNREVAERW 207

Query: 213 VQLFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLREMRA 272
           VQLF T YF+VT VQDVEGVELCGTLKNVVA+AAGFVDGLEMGNNTKAAIMR+GLREM+A
Sbjct: 208 VQLFYTHYFIVTAVQDVEGVELCGTLKNVVAIAAGFVDGLEMGNNTKAAIMRLGLREMKA 267

Query: 273 FSKLLFSSVKDSTFFESCGVADVITTC 299
           FSKLLF SVKDSTFFESCGVAD+ITTC
Sbjct: 268 FSKLLFPSVKDSTFFESCGVADLITTC 294


>Glyma19g23190.1 
          Length = 350

 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/253 (80%), Positives = 227/253 (89%), Gaps = 3/253 (1%)

Query: 47  WGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTNENVKYLPGIKLGKN 106
           WGSVAAKLIASNT++L SFHDEVRMWVFEE LPSGEKLTDVIN+TNENVKYLPGIKLGKN
Sbjct: 1   WGSVAAKLIASNTIRLASFHDEVRMWVFEEKLPSGEKLTDVINKTNENVKYLPGIKLGKN 60

Query: 107 VVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISLIKGMEVKMEGPCMI 166
                +L++ ++DANMLVFVTPHQFMEGICKRL GKI+   E ISLIKGMEVK EGP MI
Sbjct: 61  ---KRELNSTIKDANMLVFVTPHQFMEGICKRLAGKIRSDTEGISLIKGMEVKKEGPTMI 117

Query: 167 SSLISSQLRVNCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKWVQLFSTPYFMVTPV 226
           S+LI+ QL +NC VLMGANIANEIA+EKFSEATVGY  N+  AE+WV+LF+TPYF VT V
Sbjct: 118 STLITKQLGINCSVLMGANIANEIALEKFSEATVGYNQNKLAAERWVELFNTPYFNVTAV 177

Query: 227 QDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLREMRAFSKLLFSSVKDSTF 286
           +DVEGVELCGTLKNVVA+AAGFVDGLEMGNNTKAAIMRIGL+EMRAFSK+ F SVKD+TF
Sbjct: 178 EDVEGVELCGTLKNVVAIAAGFVDGLEMGNNTKAAIMRIGLKEMRAFSKMWFPSVKDNTF 237

Query: 287 FESCGVADVITTC 299
           FESCGVAD+ITTC
Sbjct: 238 FESCGVADLITTC 250


>Glyma05g24070.1 
          Length = 370

 Score =  417 bits (1071), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/263 (78%), Positives = 224/263 (85%), Gaps = 26/263 (9%)

Query: 37  SKVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTNENVK 96
           SKVTV+GSGNWGSVAAKLIASNTL+L+SFHDEVRMWV+EE L SGE+LTDVINRTNENVK
Sbjct: 48  SKVTVIGSGNWGSVAAKLIASNTLRLSSFHDEVRMWVYEETLRSGEQLTDVINRTNENVK 107

Query: 97  YLPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISLIKGM 156
           YLPGIKLGKNVVADPDL++AV+D+NMLVFVTPHQFMEGICKRL                 
Sbjct: 108 YLPGIKLGKNVVADPDLESAVKDSNMLVFVTPHQFMEGICKRLGW--------------- 152

Query: 157 EVKMEGPCMISSLISSQLRVNCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKWVQLF 216
                      SLIS  L +NC VLMGANIANEIAVEKFSEATVGY+ NRE+AE+WVQLF
Sbjct: 153 -----------SLISQHLGINCSVLMGANIANEIAVEKFSEATVGYRLNREVAERWVQLF 201

Query: 217 STPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLREMRAFSKL 276
            T YF+VT VQDVEGVELCGTLKNVVA+AAGFVDGLEMGNNTKAAIMR+GLREM+AFSKL
Sbjct: 202 YTHYFIVTAVQDVEGVELCGTLKNVVAIAAGFVDGLEMGNNTKAAIMRLGLREMKAFSKL 261

Query: 277 LFSSVKDSTFFESCGVADVITTC 299
           LF SVKDSTFFESCGVAD+ITTC
Sbjct: 262 LFPSVKDSTFFESCGVADLITTC 284


>Glyma01g23710.1 
          Length = 118

 Score =  176 bits (446), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 90/139 (64%), Positives = 101/139 (72%), Gaps = 21/139 (15%)

Query: 149 AISLIKGMEVKMEGPCMISSLISSQLRVNCCVLMGANIANEIAVEKFSEATVGYKGNREI 208
            ISLIKGMEVK EGP  IS+LI+ QL +NC +LMGANIANE                   
Sbjct: 1   GISLIKGMEVKKEGPTKISTLITKQLGINCSILMGANIANE------------------- 41

Query: 209 AEKWVQLFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLR 268
             +WV+LF+TPYF VT V+DVEGVE CGTLKNVVA+AAGF DGLEMGNNTK AIMRIGL 
Sbjct: 42  --RWVELFNTPYFNVTAVEDVEGVEFCGTLKNVVAIAAGFADGLEMGNNTKDAIMRIGLE 99

Query: 269 EMRAFSKLLFSSVKDSTFF 287
           E  AFSK+ F SVKD+TFF
Sbjct: 100 ETSAFSKIRFPSVKDNTFF 118


>Glyma02g38310.1 
          Length = 432

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 136/266 (51%), Gaps = 19/266 (7%)

Query: 37  SKVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTNENVK 96
           +KV V+G G++G+  A  +A+   +L     EV M V +       ++   IN  + N K
Sbjct: 100 NKVVVLGGGSFGTAMAAHVANRKAEL-----EVIMLVRDP------QVCLSINERHCNCK 148

Query: 97  YLPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISLIKGM 156
           Y P  +L +NVVA  D  +A+  A+  +   P QF     + +   +  G+  ISL KG+
Sbjct: 149 YFPDHRLPENVVATMDAKSALLGADYCLHAVPVQFSASFLESVAEYVDPGLPFISLSKGL 208

Query: 157 EVKMEGPCMISSLISSQLR---VNCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKWV 213
           E+      M++ +I   LR        L G + A E+ ++K   A V    ++++A    
Sbjct: 209 ELNTLR--MMAQIIPHALRNPRQPFVALSGPSFALEL-MDKLPTAMVVASKDKKLANTVQ 265

Query: 214 QLFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLREMRAF 273
           QL ++ +  ++   DV GVE+ G LKNV+A+AAG V+G+ +GNN+ AA++  G  E+R  
Sbjct: 266 QLLASSHLRISTSSDVTGVEIAGALKNVLAIAAGIVEGMNLGNNSMAALVSQGCSEIRWL 325

Query: 274 SKLLFSSVKDSTFFESCGVADVITTC 299
           +  +    K +T     G  D++ TC
Sbjct: 326 ATKM--GAKPTTITGLSGTGDIMLTC 349


>Glyma16g07270.1 
          Length = 49

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 47/49 (95%)

Query: 68  EVRMWVFEEALPSGEKLTDVINRTNENVKYLPGIKLGKNVVADPDLDNA 116
           EVRMWVFEE LPSGEKLTDVI++TNENVKYLPGIKLGKNVVA PDL+NA
Sbjct: 1   EVRMWVFEEKLPSGEKLTDVISKTNENVKYLPGIKLGKNVVAVPDLENA 49


>Glyma19g31730.1 
          Length = 465

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 59/265 (22%)

Query: 38  KVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLT------------ 85
           ++  VG+G WGSV A L+         F D++++ ++  A  + ++ T            
Sbjct: 46  RIVSVGAGAWGSVFAALLQDT---YGQFRDKIQIRIWRRAGRAVDRATAEHLFEVINSRE 102

Query: 86  DVINRTNENVKYLPGI--KLGK---------------NVVADP--------DLDNAVRDA 120
           DV+ R      YL  +  +LG                N++  P        +L  AV DA
Sbjct: 103 DVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDA 162

Query: 121 NMLVFVTPHQFMEGICKRLVGKIKEGVEA---ISLIKGMEVKMEG-PCMIS--SLISSQL 174
           +++V   P      I + +    KE +     ISL KG+E  +E  P +I+   +I+   
Sbjct: 163 DIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALEPVPHIITPTKMINQAT 222

Query: 175 RV---NCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKW----VQLFSTPYFMVTPVQ 227
           RV   N   L G NIA+EI  ++++ A +        AEKW     +    P+F+V    
Sbjct: 223 RVPMENILYLGGPNIASEIYNKEYANARICG------AEKWRKALAKFLRQPHFIVWDNS 276

Query: 228 DVEGVELCGTLKNVVALAAGFVDGL 252
           D+   E+ G LKNV A+ AG V  L
Sbjct: 277 DLVTHEVMGGLKNVYAIGAGMVAAL 301


>Glyma10g15900.1 
          Length = 458

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 59/265 (22%)

Query: 38  KVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLT------------ 85
           ++  VG+G WGSV A L+         F D+V++ ++     + ++ T            
Sbjct: 39  RIVSVGAGAWGSVFAALLQDT---YGQFRDKVQIRIWRRPGKTVDRATAEHLFEVINSRE 95

Query: 86  DVINRTNENVKYLPGI--KLGK---------------NVVADP--------DLDNAVRDA 120
           DV+ R      YL  +  +LG                N++  P        +L  AV DA
Sbjct: 96  DVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDA 155

Query: 121 NMLVFVTPHQFMEGICKRLVGKIKEGVEA---ISLIKGMEVKMEG-PCMISS--LISSQL 174
           +++V   P      I + +    KE +     ISL KG+E  +E  P +I+   +I+   
Sbjct: 156 DIVVNGLPSTETREIFEEISIYWKERITVPVIISLAKGIEAALEPVPHIITPTKMINQAT 215

Query: 175 RV---NCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKW----VQLFSTPYFMVTPVQ 227
            V   N   L G NIA+EI  ++++ A +        AEKW     +    P+F+V    
Sbjct: 216 GVPMENILYLGGPNIASEIYNKEYANARICG------AEKWRKPLAKFLRQPHFIVWDNS 269

Query: 228 DVEGVELCGTLKNVVALAAGFVDGL 252
           D+   E+ G LKNV A+ AG V  L
Sbjct: 270 DLVTHEIMGGLKNVYAIGAGMVAAL 294


>Glyma03g28970.1 
          Length = 325

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 21/155 (13%)

Query: 112 DLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEA---ISLIKGMEVKMEG-PCMIS 167
           +L  AV DA+++V   P      I + +    KE +     ISL KG+E  +E  P +I+
Sbjct: 14  NLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALEPVPHIIT 73

Query: 168 S--LISSQLRV---NCCVLMGANIANEIAVEKFSEATV-GYKGNREIAEKW----VQLFS 217
              +I+   RV   N   L G NIA+EI  ++++ A + G       AEKW     +   
Sbjct: 74  PTKMINQATRVPMENILYLGGPNIASEIYNKEYANARICG-------AEKWRKPLAKFLR 126

Query: 218 TPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGL 252
            P+F+V    D+   E+ G LKNV A+ AG V  L
Sbjct: 127 QPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAAL 161