Jatropha Genome Database

JcCB0047491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0047491.10 + phase: 0 /partial
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g24050.2                                                       217   4e-57
Glyma16g07260.1                                                       201   2e-52
Glyma05g24050.1                                                       148   3e-36

>Glyma05g24050.2 
          Length = 179

 Score =  217 bits (552), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 97/153 (63%), Positives = 119/153 (77%)

Query: 1   LREHLEKAGCGVEENLIKAINCDXXXXXXXXXXXXXXVCSNHMNIQDEVNQVVIHELIHA 60
           LRE LEKAGC V +N  KA+ CD              VCSN++ IQD+VN VVI ELIH 
Sbjct: 27  LRERLEKAGCAVGDNFFKAVTCDEEMAGAYVRREGVKVCSNYVRIQDDVNMVVIRELIHV 86

Query: 61  YDDCRAKNLDWANCAHHACSEIRASHLSGDCHYKRELLRGYMKMRGHGQECVKRRAMKSV 120
           +DDCR+ NL+W++CAH AC+EIR +HLSG CHYKRELL+G++K+RGHGQECVKR+ M+++
Sbjct: 87  FDDCRSANLNWSDCAHQACTEIRTNHLSGSCHYKRELLKGFLKIRGHGQECVKRKVMQAL 146

Query: 121 IANPYCSEAAAKDAVEAVWDVCYNDTKPFDRAP 153
             NP CS  AAKDA+EAVWDVCYNDT+PFDRAP
Sbjct: 147 SQNPNCSGLAAKDAMEAVWDVCYNDTQPFDRAP 179


>Glyma16g07260.1 
          Length = 192

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/155 (63%), Positives = 116/155 (74%), Gaps = 3/155 (1%)

Query: 1   LREHLEKAGCGVEENLIKAINCDXXXXXXX-XXXXXXXVCSNHMNIQDEVNQVVIHELIH 59
           LREHLEKAGC V +N IKA+ CD               VC N M  QD+V+Q++ HELIH
Sbjct: 39  LREHLEKAGCLVGDNFIKAVKCDNIAIAGGYTQGEGIVVCCNEMESQDDVDQLLKHELIH 98

Query: 60  AYDDCRAKNLDWANCAHHACSEIRASHLSGDCHYKRELLR-GYMKMRGHGQECVKRRAMK 118
            +DDCRA NLDW  CAHHACSEIRA HLSGDCH+KRELL+   +K+RGH QEC++RR MK
Sbjct: 99  VFDDCRAGNLDWTKCAHHACSEIRAGHLSGDCHFKRELLKLASLKIRGHEQECIRRRVMK 158

Query: 119 SVIANPYCSEAAAKDAVEAVWDVCYNDTKPFDRAP 153
           S+ ANPYCS   AK ++E+VWDVCYNDTKP+DRAP
Sbjct: 159 SLSANPYCS-GVAKASMESVWDVCYNDTKPYDRAP 192


>Glyma05g24050.1 
          Length = 201

 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 84/115 (73%)

Query: 1   LREHLEKAGCGVEENLIKAINCDXXXXXXXXXXXXXXVCSNHMNIQDEVNQVVIHELIHA 60
           LRE LEKAGC V +N  KA+ CD              VCSN++ IQD+VN VVI ELIH 
Sbjct: 27  LRERLEKAGCAVGDNFFKAVTCDEEMAGAYVRREGVKVCSNYVRIQDDVNMVVIRELIHV 86

Query: 61  YDDCRAKNLDWANCAHHACSEIRASHLSGDCHYKRELLRGYMKMRGHGQECVKRR 115
           +DDCR+ NL+W++CAH AC+EIR +HLSG CHYKRELL+G++K+RGHGQ  + R+
Sbjct: 87  FDDCRSANLNWSDCAHQACTEIRTNHLSGSCHYKRELLKGFLKIRGHGQVFLGRQ 141