Jatropha Genome Database

JcCB0046591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0046591.10 - phase: 2 /pseudo/partial
         (361 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g18090.1                                                       426   e-119
Glyma12g10120.1                                                       420   e-117
Glyma13g38850.1                                                       409   e-114
Glyma12g31540.1                                                       201   9e-52
Glyma02g17040.1                                                       107   2e-23
Glyma10g02760.1                                                       105   6e-23
Glyma01g24620.1                                                        64   3e-10

>Glyma11g18090.1 
          Length = 1010

 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/373 (63%), Positives = 256/373 (68%), Gaps = 12/373 (3%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVSF 60
           YATASARSDGLLLLCGGRDANSVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAV  
Sbjct: 287 YATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 346

Query: 61  SYXXXXXXXXXXGNLISAGTIIISVC-------CIFRFLLM-----RDSMCLEVHLEAVG 108
           +           G  +   +  ++V        C  + ++      R S        AV 
Sbjct: 347 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVE 406

Query: 109 WXKIHPVLQAAVGDLIFIYGGLRGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIHA 168
             +      AA+GDLIFIYGGLRGGV                              N+ A
Sbjct: 407 LTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQA 466

Query: 169 GRIPGRYGFVDERTRQTMSEAVPDGAVVLGNPVAPPINGDMYTDISTENAMLPGPRRTSK 228
           GR+PGRYGF+D+RTRQTM EA  DG+VVLGNPVAPP+NGDMYTDISTENA+LPG RRTSK
Sbjct: 467 GRLPGRYGFIDDRTRQTMPEAASDGSVVLGNPVAPPVNGDMYTDISTENALLPGTRRTSK 526

Query: 229 GVEYLVXXXXXXXXXXXXXXXXXXXRQVNGEVELPDRDRGAEATPSGKQISTLIKPDSSG 288
           GVEYLV                   RQVNGEVELPDRDRGAEATPSGKQIS+LIKPDS+G
Sbjct: 527 GVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAG 586

Query: 289 SNNIVPPGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLL 348
           SN+I P GVRLHHR      ETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLL
Sbjct: 587 SNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLL 646

Query: 349 DRQMSINSVPKKV 361
           DRQMSINSVPKKV
Sbjct: 647 DRQMSINSVPKKV 659


>Glyma12g10120.1 
          Length = 1001

 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/373 (62%), Positives = 255/373 (68%), Gaps = 13/373 (3%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVSF 60
           YATASARSDGLLLLCGGRDANSVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAV  
Sbjct: 279 YATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 338

Query: 61  SYXXXXXXXXXXGNLISAGTIIISVC-------CIFRFLLM-----RDSMCLEVHLEAVG 108
           +           G  +   +  ++V        C  + ++      R S        AV 
Sbjct: 339 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVE 398

Query: 109 WXKIHPVLQAAVGDLIFIYGGLRGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIHA 168
             +      AA+GDLIFIYGGLRGGV                              N+ A
Sbjct: 399 LTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAASHAAAAAAAS-NVQA 457

Query: 169 GRIPGRYGFVDERTRQTMSEAVPDGAVVLGNPVAPPINGDMYTDISTENAMLPGPRRTSK 228
           GR+PGRYGF+D+RTRQTM E  PDG+VVLGNPVAPP+NGDMYTDISTENA+LPG RRTSK
Sbjct: 458 GRLPGRYGFIDDRTRQTMPETDPDGSVVLGNPVAPPVNGDMYTDISTENALLPGSRRTSK 517

Query: 229 GVEYLVXXXXXXXXXXXXXXXXXXXRQVNGEVELPDRDRGAEATPSGKQISTLIKPDSSG 288
           GVEYLV                   RQVNGEVELPDRDRGAEATPSGKQIS+LIKPDS+G
Sbjct: 518 GVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAG 577

Query: 289 SNNIVPPGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLL 348
           SN+I P GVRLHHR      ETGGALGGMVRQLSIDQFENEGRRVSYGTPES TAARKLL
Sbjct: 578 SNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESTTAARKLL 637

Query: 349 DRQMSINSVPKKV 361
           DRQMSINSVPKKV
Sbjct: 638 DRQMSINSVPKKV 650


>Glyma13g38850.1 
          Length = 988

 Score =  409 bits (1052), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/373 (61%), Positives = 251/373 (67%), Gaps = 22/373 (5%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVSF 60
           YATASARSDGLLLLCGGRDANSVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAV  
Sbjct: 275 YATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 334

Query: 61  SYXXXXXXXXXXGNLISAGTIIISVC-------CIFRFLLM-----RDSMCLEVHLEAVG 108
           +           G  +   +  ++V        C  + ++      R S        AV 
Sbjct: 335 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVE 394

Query: 109 WXKIHPVLQAAVGDLIFIYGGLRGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIHA 168
             +      AAVGDLIFIYGGLRGGV                              N+ A
Sbjct: 395 LTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAS----------NVQA 444

Query: 169 GRIPGRYGFVDERTRQTMSEAVPDGAVVLGNPVAPPINGDMYTDISTENAMLPGPRRTSK 228
           GR+P RYGF D+RTR+TM EA  DG+VVLGNPVAPP+NGD+YTDISTENAML GPRRT++
Sbjct: 445 GRLPERYGFADDRTRETMPEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRRTAR 504

Query: 229 GVEYLVXXXXXXXXXXXXXXXXXXXRQVNGEVELPDRDRGAEATPSGKQISTLIKPDSSG 288
           GVEYLV                   RQ NGEVELPDRDRGAEATPSGK+ S+LIKPDS+G
Sbjct: 505 GVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKETSSLIKPDSAG 564

Query: 289 SNNIVPPGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLL 348
           SNNI P GVRLHHR      ETGGALGGMVRQLSIDQFENEGRRV YGTPE+ATAARKLL
Sbjct: 565 SNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVGYGTPENATAARKLL 624

Query: 349 DRQMSINSVPKKV 361
           DRQMSINSVPKKV
Sbjct: 625 DRQMSINSVPKKV 637


>Glyma12g31540.1 
          Length = 951

 Score =  201 bits (512), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 106/145 (73%), Positives = 110/145 (75%)

Query: 217 NAMLPGPRRTSKGVEYLVXXXXXXXXXXXXXXXXXXXRQVNGEVELPDRDRGAEATPSGK 276
           N   P  RRT+KGVEYLV                   RQ NGEVELPDRDRGAEATPSGK
Sbjct: 456 NGPRPLNRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGK 515

Query: 277 QISTLIKPDSSGSNNIVPPGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRVSYG 336
           Q S+LIKPDS+GSNNI P GVRLHHR      ETGGALGGMVRQLSIDQFENEGRRV YG
Sbjct: 516 QTSSLIKPDSAGSNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVGYG 575

Query: 337 TPESATAARKLLDRQMSINSVPKKV 361
           TPE+ATAARKLLDRQMSINSVPKKV
Sbjct: 576 TPENATAARKLLDRQMSINSVPKKV 600



 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/146 (55%), Positives = 91/146 (62%), Gaps = 12/146 (8%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVSF 60
           YATASARSDGLLLLCGGRDANSVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAV  
Sbjct: 278 YATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 337

Query: 61  SYXXXXXXXXXXGNLISAGTIIISVC-------CIFRFLLM-----RDSMCLEVHLEAVG 108
           +           G  +   +  ++V        C  + ++      R S        AV 
Sbjct: 338 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDIKSVVTSSRTGRYSADAAGGDAAVE 397

Query: 109 WXKIHPVLQAAVGDLIFIYGGLRGGV 134
             +      AAVGDLIFIYGGLRGGV
Sbjct: 398 LTRRCRHAAAAVGDLIFIYGGLRGGV 423


>Glyma02g17040.1 
          Length = 881

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 10/143 (6%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVSF 60
           YATASARSDG+ LLCGGRD++  PLA AYGL  HR+G+WEW +APGVSPSPRYQHAAV  
Sbjct: 207 YATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFV 266

Query: 61  SYXXXXXXXXXXGNLISAGTIIISVCCIFRFLLMRDSMCLEVHLEAVGWXKIHPVLQ--- 117
                       G     G   I+V      + +  +  +       G     P L+   
Sbjct: 267 GARLHVTGGVLRGGRSVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKGH-DYDPSLELMR 325

Query: 118 ------AAVGDLIFIYGGLRGGV 134
                 AAVG  IFIYGGLRG +
Sbjct: 326 RCRHAAAAVGVHIFIYGGLRGDI 348



 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 269 AEATPSGKQISTLIKPDSSGSNNIVPPGVRLHHRXXXXXXETGGALGGMVRQLSIDQFEN 328
           AE T      S  ++  S GS+      VRLH R      E  G LGGMVRQLS+DQFEN
Sbjct: 441 AEETSVSDDNSQAVETVSDGSD--TEGDVRLHPRAVVVAKEALGNLGGMVRQLSLDQFEN 498

Query: 329 EGRRVSYGTPESATAARKLLDRQMSINSVPKKV 361
           E RR+     +     +K   RQ S   + KK+
Sbjct: 499 ESRRMIPVNNDLPYPTKKFT-RQKSPQGLHKKI 530


>Glyma10g02760.1 
          Length = 936

 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 10/143 (6%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVSF 60
           YATASARSDG+ LLCGGRD++  PLA AYGL  HR+G+WEW +APGVSPSPRYQHAAV  
Sbjct: 207 YATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFV 266

Query: 61  SYXXXXXXXXXXGNLISAGTIIISVCCIFRFLLMRDSMCLEVHLEAVGWXKIHPVLQ--- 117
                       G     G   I+V      + +  +  +       G     P L+   
Sbjct: 267 GARLHVTGGVLRGGRSVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKGH-DYDPPLELMR 325

Query: 118 ------AAVGDLIFIYGGLRGGV 134
                 AAVG  IFIYGGLRG +
Sbjct: 326 RCRHAAAAVGVHIFIYGGLRGDI 348



 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 26/37 (70%)

Query: 297 VRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRV 333
           VRLH R      E  G LGGMVRQLS+DQFENE RR+
Sbjct: 467 VRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRM 503


>Glyma01g24620.1 
          Length = 111

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/28 (96%), Positives = 27/28 (96%)

Query: 31 LAKHRDGRWEWAIAPGVSPSPRYQHAAV 58
          LAKHRDGRWEWAIAPGVSPSPRYQHA V
Sbjct: 1  LAKHRDGRWEWAIAPGVSPSPRYQHATV 28