Jatropha Genome Database

JcCB0044081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0044081.10 - phase: 0 /pseudo/partial
         (502 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g19320.1                                                       541   e-154
Glyma17g09700.1                                                       535   e-152
Glyma13g21030.1                                                       524   e-148
Glyma1129s00200.1                                                     312   6e-85
Glyma18g19360.1                                                       226   5e-59
Glyma08g39370.1                                                       221   1e-57
Glyma05g02230.1                                                       130   3e-30
Glyma18g12950.1                                                        98   2e-20

>Glyma06g19320.1 
          Length = 779

 Score =  541 bits (1393), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 269/314 (85%), Positives = 282/314 (89%), Gaps = 7/314 (2%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQ+GDNRT+DMLVGDIYGG+DYSKIGLSASTIASSFGKTIS+KKELE+YRPE
Sbjct: 182 SFDELLELSQKGDNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPE 241

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNIGQI+YLNA                 HAYTMDTISFAVHFWS GEAQ
Sbjct: 242 DISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQ 301

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK-- 373
           AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK  
Sbjct: 302 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKAK 361

Query: 374 ----ISWMEKFVLKGTEITAPVPMAP-PGTTGLGGFEVPSSQGRTLRSDASALNVGVLHL 428
               ISWMEKF+ KGTEITAPVPM P  GTTGLGGFEVP S+G TLRSDASALNVGVLHL
Sbjct: 362 FSMQISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHL 421

Query: 429 VPTLDVFPLLADPKMYEPNTIDLSDHKELEYWFTVLSEHMPDLVDKAVASEGGTDDAKRR 488
           VPTL+VFPLLADPK+Y+PNTIDLSDH ELEYW T+LSEH+PDLVDKAVASEGGTDDAKRR
Sbjct: 422 VPTLEVFPLLADPKLYDPNTIDLSDHSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRR 481

Query: 489 GDAFARAFSAHLAR 502
           GDAFARAFSAHLAR
Sbjct: 482 GDAFARAFSAHLAR 495


>Glyma17g09700.1 
          Length = 910

 Score =  535 bits (1377), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 263/307 (85%), Positives = 272/307 (88%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQ+GDN   DMLVGDIYGGMDYSKIGLSASTIASSFGK  S+KK LEDYRPE
Sbjct: 296 SFDELLELSQKGDNSNTDMLVGDIYGGMDYSKIGLSASTIASSFGKATSEKKGLEDYRPE 355

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNI QI+YLNA                 HAYTMD ISFA+HFWS G AQ
Sbjct: 356 DISLSLLRMISYNIAQIAYLNALRFGLKRIFFGGFFIRGHAYTMDAISFAIHFWSNGAAQ 415

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKIS 375
           AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPL DLNEKIS
Sbjct: 416 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLRDLNEKIS 475

Query: 376 WMEKFVLKGTEITAPVPMAPPGTTGLGGFEVPSSQGRTLRSDASALNVGVLHLVPTLDVF 435
           WMEKF+ K TEITAPVPMAPPGTTGLGGFEVP S+G TLRSDASALNVGVLHLVPTL+VF
Sbjct: 476 WMEKFLQKVTEITAPVPMAPPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVF 535

Query: 436 PLLADPKMYEPNTIDLSDHKELEYWFTVLSEHMPDLVDKAVASEGGTDDAKRRGDAFARA 495
           PLLAD KMYEPNTIDLSDH ELEYWF +LSEH+PDLVDKAVASEGGTDDAKRRGDAFARA
Sbjct: 536 PLLADLKMYEPNTIDLSDHSELEYWFKILSEHLPDLVDKAVASEGGTDDAKRRGDAFARA 595

Query: 496 FSAHLAR 502
           FSAHLAR
Sbjct: 596 FSAHLAR 602



 Score =  123 bits (309), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/79 (77%), Positives = 64/79 (81%), Gaps = 1/79 (1%)

Query: 1   MAGSLIKLVYFSRHEDRSINDKRKKTVKERLGIS-NGNRRSYPILGGRLHFVKFETRKIN 59
           + GSLIKLVYFSRH+D+S  DKR K VK RLG   NGNRRSYPILGGRLHFVKFET KIN
Sbjct: 53  IGGSLIKLVYFSRHQDQSTYDKRVKNVKNRLGFPPNGNRRSYPILGGRLHFVKFETSKIN 112

Query: 60  ECLDFISSKQLHRGGHRWW 78
           ECLDFISSKQLH  G   W
Sbjct: 113 ECLDFISSKQLHSAGVPHW 131


>Glyma13g21030.1 
          Length = 940

 Score =  524 bits (1349), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 269/361 (74%), Positives = 282/361 (78%), Gaps = 54/361 (14%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQ+GDNRT+DMLVGDIYGG+DYSKIGLSASTIASSFGKTIS+KKELE+YRPE
Sbjct: 278 SFDELLELSQKGDNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPE 337

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNIGQI+YLNA                 HAYTMDTISFAVHFWS GEAQ
Sbjct: 338 DISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQ 397

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK-- 373
           AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK  
Sbjct: 398 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKAK 457

Query: 374 ---------------------------------------------------ISWMEKFVL 382
                                                              ISWMEKF+ 
Sbjct: 458 CIEGKGIVTLFLLRVWLCGIIVASLWVLAVIRVHSITFTPYYYESIQTVIPISWMEKFLQ 517

Query: 383 KGTEITAPVPMAP-PGTTGLGGFEVPSSQGRTLRSDASALNVGVLHLVPTLDVFPLLADP 441
           KGTEITAPVPM P  GTTGLGGFEVP S+G TLRSDASALNVGVLHLVPTL+VFPLLADP
Sbjct: 518 KGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADP 577

Query: 442 KMYEPNTIDLSDHKELEYWFTVLSEHMPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLA 501
           K+Y+PNTIDLSDH ELEYW T+LSEH+PDLVDKAVASEGGTDDAKRRGDAFARAFSAHLA
Sbjct: 578 KLYDPNTIDLSDHSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLA 637

Query: 502 R 502
           R
Sbjct: 638 R 638



 Score =  135 bits (341), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 63/74 (85%), Positives = 70/74 (94%)

Query: 1   MAGSLIKLVYFSRHEDRSINDKRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKINE 60
           + GSLIKLVYFSRHED+S +DKRK++VKERLG+SNGNRRS+PILGGRLHFVKFETRKINE
Sbjct: 77  IGGSLIKLVYFSRHEDQSADDKRKRSVKERLGLSNGNRRSFPILGGRLHFVKFETRKINE 136

Query: 61  CLDFISSKQLHRGG 74
           CLDFI SKQLH GG
Sbjct: 137 CLDFIYSKQLHCGG 150


>Glyma1129s00200.1 
          Length = 367

 Score =  312 bits (799), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 154/178 (86%), Positives = 160/178 (89%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQ+GDNRT+DMLVGDIYGG+DYSKIGLSASTIASSFGKTIS+KKELE+YRPE
Sbjct: 32  SFDELLELSQKGDNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPE 91

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNIGQI+YLNA                 HAYTMDTISFAVHFWS GEAQ
Sbjct: 92  DISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQ 151

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK 373
           AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK
Sbjct: 152 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK 209



 Score =  177 bits (450), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/99 (84%), Positives = 91/99 (91%), Gaps = 1/99 (1%)

Query: 374 ISWMEKFVLKGTEITAPVPMAP-PGTTGLGGFEVPSSQGRTLRSDASALNVGVLHLVPTL 432
           ISWMEKF+ KGTEITAPVPM P  GTTGLGGFEVP S+G TLRSDASALNVGVLHLVPTL
Sbjct: 269 ISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFEVPLSKGNTLRSDASALNVGVLHLVPTL 328

Query: 433 DVFPLLADPKMYEPNTIDLSDHKELEYWFTVLSEHMPDL 471
           +VFPLLADPK+Y+PNTIDLSDH ELEYW T+LSEH+PDL
Sbjct: 329 EVFPLLADPKLYDPNTIDLSDHSELEYWLTILSEHLPDL 367


>Glyma18g19360.1 
          Length = 417

 Score =  226 bits (575), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 117/187 (62%), Positives = 139/187 (74%), Gaps = 3/187 (1%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELL+LS RG+NR +DMLVGDIYGGMDYSKIGLS++ IASSFGK ISD KE EDY+PE
Sbjct: 225 SFDELLDLSYRGNNRAVDMLVGDIYGGMDYSKIGLSSTAIASSFGKAISDNKEREDYKPE 284

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DI+ SLLRMIS NIGQISYLNA                 H +TMDT+S AV+FWSKGEA+
Sbjct: 285 DIARSLLRMISNNIGQISYLNALRFGMKRIFFGGFFIRRHPFTMDTLSVAVNFWSKGEAK 344

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKI-HGPPLGDLN--E 372
           AMFLRHEGFLG +GAFMS +KHGL +L+ HQ+V+R      +   KI HG P GD N  E
Sbjct: 345 AMFLRHEGFLGGVGAFMSSDKHGLKELLAHQVVQRSLSKLSFAVDKILHGSPDGDFNGDE 404

Query: 373 KISWMEK 379
            ++ ++K
Sbjct: 405 IVTSIQK 411



 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 54/76 (71%), Gaps = 1/76 (1%)

Query: 1   MAGSLIKLVYFSRHEDRSINDKRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKINE 60
           + GSL KLVYF++ +D  ++ +   + ++    SNG+++ YP+L GRL+F KFET KIN+
Sbjct: 27  IGGSLAKLVYFTKDDDHLVDGEEGISHRKAFEKSNGSKQ-YPVLNGRLNFKKFETSKIND 85

Query: 61  CLDFISSKQLHRGGHR 76
           C++FI S +LH GG +
Sbjct: 86  CIEFIKSMKLHIGGSQ 101


>Glyma08g39370.1 
          Length = 413

 Score =  221 bits (564), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/177 (63%), Positives = 133/177 (75%), Gaps = 1/177 (0%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELS RG+NR +DMLVGDIYGGMDYSKIGLS++ IASSFGK ISD KE  DY+PE
Sbjct: 225 SFDELLELSYRGNNRAVDMLVGDIYGGMDYSKIGLSSTAIASSFGKAISDNKERGDYKPE 284

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DI+ SLLRMIS NIGQISYLNA                 H +TMDT+S AV+FWSKGEA+
Sbjct: 285 DIARSLLRMISNNIGQISYLNALRFGLKRIFFGGFFIRRHPFTMDTLSVAVNFWSKGEAK 344

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGK-IHGPPLGDLN 371
           AMFLRHEGFLG +GAFMS +KHGL +L+ +Q+V+R P    +   K +HG P G+ N
Sbjct: 345 AMFLRHEGFLGGVGAFMSSDKHGLKELLANQVVQRSPSKLSFAVDKTLHGSPDGEFN 401



 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 1   MAGSLIKLVYFSRHEDRSINDKRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKINE 60
           + GSL KLVYF++ +D  ++ +   + ++ L  S+ +++ YP+L G+L+F KFET +IN+
Sbjct: 27  IGGSLAKLVYFTKDDDHLVDGEEGISHRKALEKSDSSKQ-YPVLNGKLNFKKFETSRIND 85

Query: 61  CLDFISSKQLHRGGHRWWGIQVYRPLQGKA 90
           C++FI S +LH GG +       +P+  KA
Sbjct: 86  CIEFIKSMKLHIGGSQPQENPGSQPIAIKA 115


>Glyma05g02230.1 
          Length = 323

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/76 (84%), Positives = 68/76 (89%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           +FDELLELSQ+GDN   DMLVGDIYGGMDYSK GLSASTIASSFGK  S+KK L+DYRPE
Sbjct: 248 NFDELLELSQKGDNSNTDMLVGDIYGGMDYSKTGLSASTIASSFGKVTSEKKGLDDYRPE 307

Query: 256 DISLSLLRMISYNIGQ 271
           DISLSLLRMISYNI Q
Sbjct: 308 DISLSLLRMISYNIAQ 323



 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/74 (77%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 1   MAGSLIKLVYFSRHEDRSINDKRKKTVKERLGIS-NGNRRSYPILGGRLHFVKFETRKIN 59
           + GSLIKLVYFSRH D+S  DKR   V  RLG   NGNRRSYPILGGRLHFVKFET KIN
Sbjct: 44  IGGSLIKLVYFSRHRDQSTYDKRMINVNNRLGFPPNGNRRSYPILGGRLHFVKFETSKIN 103

Query: 60  ECLDFISSKQLHRG 73
           ECLDFI+SKQLH G
Sbjct: 104 ECLDFINSKQLHCG 117


>Glyma18g12950.1 
          Length = 273

 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 56/69 (81%), Gaps = 3/69 (4%)

Query: 376 WMEKFVLKGTEITAPVPMAP-PGTTGLGGFEVPSSQGRTLRSDASALNVGVLHLVPTLDV 434
           W E   LKGTEITA VPM P  G TGLGGFEV  S+G TLRSDASALNVGV HLVPT++V
Sbjct: 105 WFE--FLKGTEITARVPMTPLAGITGLGGFEVLLSKGNTLRSDASALNVGVFHLVPTMEV 162

Query: 435 FPLLADPKM 443
           FPL+A+PK+
Sbjct: 163 FPLVANPKL 171