Jatropha Genome Database

JcCB0042121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0042121.10 + phase: 0 /partial
         (434 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g13790.1                                                       592   e-169
Glyma05g03190.1                                                       590   e-169
Glyma05g34900.1                                                       580   e-166
Glyma05g03210.1                                                       511   e-145
Glyma08g04810.1                                                       347   2e-95
Glyma04g36990.1                                                        54   4e-07

>Glyma17g13790.1 
          Length = 477

 Score =  592 bits (1526), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 303/399 (75%), Positives = 325/399 (81%), Gaps = 32/399 (8%)

Query: 1   MAQLKALSPYSS-------LNLTFHGPKRDVLQHNFKVSSNAKPTISLLRLGAKRSDLQG 53
           MAQLKA SP  S       L+ T H     +L H F     AKP+ S   LG + S    
Sbjct: 1   MAQLKA-SPLCSTPATAPSLHTTGH-----LLYHQF---WKAKPS-SFKELGLRTS---- 46

Query: 54  DELVVNARDIIRTSRSKAIQAVLSSDTEVETHEATKRKGLRGHLNKVVLAYSGGLDTSVI 113
                     I  ++ K I+A   SDTEV   E+TK  GLRG LNKVVLAYSGGLDTSVI
Sbjct: 47  ----------IGATKLKVIKAAARSDTEV-VSESTKGGGLRGKLNKVVLAYSGGLDTSVI 95

Query: 114 VPWLRENYGCEVVCFTADVGQXXXXXXXXXXXXXXSGACQLVVKDLQEEFVKDYIFPCLR 173
           VPWLRENYGCEVVCFTADVGQ              SGACQLVVKDL+EEFVKDYIFPCLR
Sbjct: 96  VPWLRENYGCEVVCFTADVGQGIKELEGLEQKAKASGACQLVVKDLKEEFVKDYIFPCLR 155

Query: 174 AGAIYERKYLLGTSMARPVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPE 233
           AGAIYERKYLLGTSMARPVIAKAMVDVAKEVGADAV+HGCTGKGNDQVRFELTFFALNP+
Sbjct: 156 AGAIYERKYLLGTSMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPK 215

Query: 234 LNVVAPWREWDIKGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEP 293
           LNVVAPWREWDI GREDAIEYAKKHN+PVPVTKKSIYSRDRNLWHLSHEGDILEDP NEP
Sbjct: 216 LNVVAPWREWDITGREDAIEYAKKHNIPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEP 275

Query: 294 KKDMYMMSVDPEDAPNQPEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRID 353
           KKDMYMMSVDPEDAP+Q EYVEIG+ESG+PVSVNGK+LSPASLL+ELN+IGG+HG+GRID
Sbjct: 276 KKDMYMMSVDPEDAPDQAEYVEIGLESGLPVSVNGKRLSPASLLAELNEIGGKHGIGRID 335

Query: 354 MVENRLVGMKSRGVYETPGGTILYSAARELESLTLDRET 392
           MVENRLVGMKSRGVYETPGGTIL++AARELESLTLDRET
Sbjct: 336 MVENRLVGMKSRGVYETPGGTILFAAARELESLTLDRET 374


>Glyma05g03190.1 
          Length = 476

 Score =  590 bits (1522), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 297/392 (75%), Positives = 320/392 (81%), Gaps = 19/392 (4%)

Query: 1   MAQLKALSPYSSLNLTFHGPKRDVLQHNFKVSSNAKPTISLLRLGAKRSDLQGDELVVNA 60
           MAQLKA SP  S   T   P      H +     AKP+ S   LG + S           
Sbjct: 1   MAQLKA-SPACSTRAT--APSFHTTGHLYHHFWKAKPS-SFKELGLRTS----------- 45

Query: 61  RDIIRTSRSKAIQAVLSSDTEVETHEATKRKGLRGHLNKVVLAYSGGLDTSVIVPWLREN 120
              +  ++ + I+A   SDTEV   E TK  GLRG LNKVVLAYSGGLDTSVIVPWLREN
Sbjct: 46  ---VGANKLQVIKAAARSDTEV-VSETTKAGGLRGKLNKVVLAYSGGLDTSVIVPWLREN 101

Query: 121 YGCEVVCFTADVGQXXXXXXXXXXXXXXSGACQLVVKDLQEEFVKDYIFPCLRAGAIYER 180
           YGCEVVCFTADVGQ              SGACQLVVKDL+EEFVKDYIFPCLRAGA+YER
Sbjct: 102 YGCEVVCFTADVGQGIKELEGLEQKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAVYER 161

Query: 181 KYLLGTSMARPVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPW 240
           KYLLGTSMARPVIAKAMVDVAKEVGADAV+HGCTGKGNDQVRFELTFFALNP+LNVVAPW
Sbjct: 162 KYLLGTSMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNVVAPW 221

Query: 241 REWDIKGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEPKKDMYMM 300
           REWDI GREDAIEYAKKH++PVPVTKKSIYSRDRNLWHLSHEGDILEDP+NEPKKDMYMM
Sbjct: 222 REWDITGREDAIEYAKKHSIPVPVTKKSIYSRDRNLWHLSHEGDILEDPSNEPKKDMYMM 281

Query: 301 SVDPEDAPNQPEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRIDMVENRLV 360
           SVDPEDAP+Q EYVEIG+ESG+PVSVNGK LSPASLL+ELN+IGGRHG+GRIDMVENRLV
Sbjct: 282 SVDPEDAPDQAEYVEIGLESGLPVSVNGKSLSPASLLAELNEIGGRHGIGRIDMVENRLV 341

Query: 361 GMKSRGVYETPGGTILYSAARELESLTLDRET 392
           GMKSRGVYETPGGTIL++AARELESLTLDRET
Sbjct: 342 GMKSRGVYETPGGTILFAAARELESLTLDRET 373


>Glyma05g34900.1 
          Length = 483

 Score =  580 bits (1496), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 296/399 (74%), Positives = 323/399 (80%), Gaps = 26/399 (6%)

Query: 1   MAQLKA--LSPYSSLNL--TFHGPK---RDVLQHNFKVSSNAKPTISLLRLGAKRSDLQG 53
           M QLKA   S  SSL +  +FH        +L+H F   S AKP +SL  LG K S    
Sbjct: 1   MTQLKASPASACSSLAIAPSFHHASITTGHLLRHQF---SKAKP-LSLKELGLKTS---- 52

Query: 54  DELVVNARDIIRTSRSKAIQAVLSSDTEVETHEATKRKGLRGHLNKVVLAYSGGLDTSVI 113
                     +  ++ + I+A    DTEV   E TK  GLRG LNKVVLAYSGGLDTSVI
Sbjct: 53  ----------VGANKLQVIKAAARIDTEV-VSETTKGGGLRGKLNKVVLAYSGGLDTSVI 101

Query: 114 VPWLRENYGCEVVCFTADVGQXXXXXXXXXXXXXXSGACQLVVKDLQEEFVKDYIFPCLR 173
           VPWLRENYGCEVVCFTADVGQ              SGACQLVVKDL+EEFV++YIFPCLR
Sbjct: 102 VPWLRENYGCEVVCFTADVGQGIKELDGLEAKAKASGACQLVVKDLKEEFVREYIFPCLR 161

Query: 174 AGAIYERKYLLGTSMARPVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPE 233
           AGA+YERKYLLGTSMARPVIAKAMVDVAKEVGADAV+HGCTGKGNDQVRFELTFFALNP+
Sbjct: 162 AGAVYERKYLLGTSMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPK 221

Query: 234 LNVVAPWREWDIKGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEP 293
           LNVVAPWREWDI GREDAIEYAKKHN+PVPVTKKSIYSRDRNLWHLSHEGDILEDP NEP
Sbjct: 222 LNVVAPWREWDITGREDAIEYAKKHNIPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEP 281

Query: 294 KKDMYMMSVDPEDAPNQPEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRID 353
           KKDMYMMSVD EDAP++ EYVEI IESG+PVSVNGK+LSPA+LL+ELN+IGGRHG+GRID
Sbjct: 282 KKDMYMMSVDAEDAPDEAEYVEIEIESGLPVSVNGKRLSPATLLTELNEIGGRHGIGRID 341

Query: 354 MVENRLVGMKSRGVYETPGGTILYSAARELESLTLDRET 392
           MVENRLVGMKSRGVYETPGGTIL++AARELE LTLDRET
Sbjct: 342 MVENRLVGMKSRGVYETPGGTILFAAARELEFLTLDRET 380


>Glyma05g03210.1 
          Length = 418

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 248/322 (77%), Positives = 269/322 (83%), Gaps = 23/322 (7%)

Query: 84  THEATKRKGLRGHLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQXXXXXXXXX 143
           T   T+   LRG L+KVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQ         
Sbjct: 4   TLSLTRCVALRGKLSKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQGIQELEGLE 63

Query: 144 XXXXXSGACQLVVKDLQEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAKE 203
                SGA QLVVKDL+EEFV DY+FPCLRAGA+YERKYLLGTSMARPVIAKAMVDVAKE
Sbjct: 64  AKAKASGASQLVVKDLKEEFVSDYVFPCLRAGAVYERKYLLGTSMARPVIAKAMVDVAKE 123

Query: 204 VGADAVAHGCTGKGNDQ-------------VRFELTFFALNPELNVVAPWREWDIKGRED 250
           VGADAV+HGCTGKGNDQ             VRFELTFFALNP+LNVVAPWREWDI GRED
Sbjct: 124 VGADAVSHGCTGKGNDQACLTIGLTRLINHVRFELTFFALNPKLNVVAPWREWDITGRED 183

Query: 251 AIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEPKKDMYMMSVDPEDAPNQ 310
           AIEYAKKHN+PVPVTK SIYSRDRNLWHLSHEGDILEDP NEPKKDMY+MSVDPEDAP+Q
Sbjct: 184 AIEYAKKHNIPVPVTKTSIYSRDRNLWHLSHEGDILEDPANEPKKDMYIMSVDPEDAPDQ 243

Query: 311 PEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRIDMVENRLVGMKSRGVYET 370
           PEYVEIGIESG+PVSVNG++LSPASLL+ELN+IGG+HG+GR+DM  +            T
Sbjct: 244 PEYVEIGIESGLPVSVNGRRLSPASLLAELNEIGGKHGIGRVDMPWS----------VRT 293

Query: 371 PGGTILYSAARELESLTLDRET 392
           PGGTIL++AARELESLTLDRET
Sbjct: 294 PGGTILFAAARELESLTLDRET 315


>Glyma08g04810.1 
          Length = 377

 Score =  347 bits (890), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 171/223 (76%), Positives = 187/223 (83%), Gaps = 6/223 (2%)

Query: 176 AIYERKYLLGTSMARPVIAKAMVD-----VAKEVGADAVAHGCTGKGN-DQVRFELTFFA 229
           A+YERKYLLG SM RPVIAK +V      + K++       G  GK     VRFELTFFA
Sbjct: 64  AVYERKYLLGISMPRPVIAKLLVQWRWLMLPKKLELMLSPMGVQGKEMIRHVRFELTFFA 123

Query: 230 LNPELNVVAPWREWDIKGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 289
           LNP+LNVVAPWREWDI GRE AIEYAKKHN+ VPVTKKSIYSRDRNLWHLSHE DILEDP
Sbjct: 124 LNPKLNVVAPWREWDITGRELAIEYAKKHNISVPVTKKSIYSRDRNLWHLSHESDILEDP 183

Query: 290 TNEPKKDMYMMSVDPEDAPNQPEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGV 349
            NEPKKDMYMM VDPEDAP+Q EYVEI IE G+PVSVNGK+L PA LL+ELN+IGGRHG+
Sbjct: 184 ANEPKKDMYMMPVDPEDAPDQAEYVEIEIEWGLPVSVNGKRLWPAYLLTELNEIGGRHGI 243

Query: 350 GRIDMVENRLVGMKSRGVYETPGGTILYSAARELESLTLDRET 392
           GRIDMVENRLVGMKSRGVY+TPGGTIL++AARELE LTLDRET
Sbjct: 244 GRIDMVENRLVGMKSRGVYDTPGGTILFAAARELEFLTLDRET 286


>Glyma04g36990.1 
          Length = 99

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 31/33 (93%)

Query: 352 IDMVENRLVGMKSRGVYETPGGTILYSAARELE 384
           +++VE+R+VGMK+ GVY+TPGGTIL++A R+LE
Sbjct: 4   VNLVEDRIVGMKNSGVYKTPGGTILFTAVRDLE 36