Jatropha Genome Database

JcCB0041981.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041981.10 + phase: 0 /partial
         (323 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38740.1                                                       565   e-161
Glyma10g44010.1                                                       563   e-160
Glyma10g13840.1                                                       496   e-140

>Glyma20g38740.1 
          Length = 636

 Score =  565 bits (1455), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/322 (84%), Positives = 289/322 (89%)

Query: 2   STSRRKLQVVSPVPADIDIANSVEPFHISEIAKDLNLSPNHYDLYGKYKAKVLLSALDEL 61
           ST+ RKLQVVSPVPADIDIANSVEP HIS+IAKDLNLSPNHYDLYGKYKAKVLLS LDEL
Sbjct: 4   STTVRKLQVVSPVPADIDIANSVEPVHISQIAKDLNLSPNHYDLYGKYKAKVLLSVLDEL 63

Query: 62  EGSPDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXX 121
           +GS DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIK  
Sbjct: 64  QGSEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGG 123

Query: 122 XXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHESSQSDKALFNRLCLPN 181
                YSQVIPMDEFNLHLTGDIH               RIFHES+QSDKALFNRLC PN
Sbjct: 124 AAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFNRLCPPN 183

Query: 182 KEGKRTFSDIMFRRLKKLGISKTKPEELTAQEIKKFARLDIDPNSITWRRVMDVNDRFLR 241
           KEGKR+FSD+MFRRL KLGISKT P++LT +E+ KFARLDIDPNSITWRRVMD+NDRFLR
Sbjct: 184 KEGKRSFSDVMFRRLTKLGISKTNPDDLTPEEVNKFARLDIDPNSITWRRVMDINDRFLR 243

Query: 242 KITVGQGPEEKGMLRETGFDISVASEIMAVLALTTSLADMRERLGNMVVGNSKAGDPITA 301
           KI +GQGP+EKGM+RETGFDISVASEIMAVLALTTSLADMRERLG MV+GNSK+GDP+TA
Sbjct: 244 KIAIGQGPDEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKSGDPVTA 303

Query: 302 DDLGVGGALTVLMKDAINPTLM 323
           DDLGVGGALTVLMKDAI+PTLM
Sbjct: 304 DDLGVGGALTVLMKDAIHPTLM 325


>Glyma10g44010.1 
          Length = 636

 Score =  563 bits (1450), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 270/322 (83%), Positives = 289/322 (89%)

Query: 2   STSRRKLQVVSPVPADIDIANSVEPFHISEIAKDLNLSPNHYDLYGKYKAKVLLSALDEL 61
           ST+ RKLQVVSPVPADIDIANSVEP HIS+IAK+LNLSPNHYDLYGKYKAKVLLS LDEL
Sbjct: 4   STTVRKLQVVSPVPADIDIANSVEPVHISQIAKELNLSPNHYDLYGKYKAKVLLSVLDEL 63

Query: 62  EGSPDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXX 121
           +GS DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIK  
Sbjct: 64  QGSEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGG 123

Query: 122 XXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHESSQSDKALFNRLCLPN 181
                YSQVIPMDEFNLHLTGDIH               RIFHES+QSDKALFNRLC PN
Sbjct: 124 AAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFNRLCPPN 183

Query: 182 KEGKRTFSDIMFRRLKKLGISKTKPEELTAQEIKKFARLDIDPNSITWRRVMDVNDRFLR 241
           KEGKR+FSD+MFRRLKKLGISK  P++LT  E+ KFARLDIDPNSITWRRVMD+NDRFLR
Sbjct: 184 KEGKRSFSDVMFRRLKKLGISKINPDDLTPDEVNKFARLDIDPNSITWRRVMDINDRFLR 243

Query: 242 KITVGQGPEEKGMLRETGFDISVASEIMAVLALTTSLADMRERLGNMVVGNSKAGDPITA 301
           KIT+GQGP+EKGM+RETGFDISVASEIMAVLALTTSLADMRERLG MV+GNS++GDP+TA
Sbjct: 244 KITIGQGPDEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSRSGDPVTA 303

Query: 302 DDLGVGGALTVLMKDAINPTLM 323
           DDLGVGGALTVLMKDAI+PTLM
Sbjct: 304 DDLGVGGALTVLMKDAIHPTLM 325


>Glyma10g13840.1 
          Length = 355

 Score =  496 bits (1276), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/291 (81%), Positives = 256/291 (87%)

Query: 4   SRRKLQVVSPVPADIDIANSVEPFHISEIAKDLNLSPNHYDLYGKYKAKVLLSALDELEG 63
           S RKLQVVSPVP DIDIANSVEP HIS+IAKDLNLSPNHYDLYGKYKAKVLLS LDEL+G
Sbjct: 2   SLRKLQVVSPVPVDIDIANSVEPVHISQIAKDLNLSPNHYDLYGKYKAKVLLSVLDELQG 61

Query: 64  SPDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXX 123
           S DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIK    
Sbjct: 62  SEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAA 121

Query: 124 XXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHESSQSDKALFNRLCLPNKE 183
              YSQVIPMDEFNLHLTGDIH               RIFHES+QSDKALFNRLC PNKE
Sbjct: 122 GGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFNRLCPPNKE 181

Query: 184 GKRTFSDIMFRRLKKLGISKTKPEELTAQEIKKFARLDIDPNSITWRRVMDVNDRFLRKI 243
           GKR+FSD+MFRRL KLGISKT P++LT +E+ KFARLDIDPNSITWRRVMD+NDRFLRKI
Sbjct: 182 GKRSFSDVMFRRLTKLGISKTNPDDLTPEEVNKFARLDIDPNSITWRRVMDINDRFLRKI 241

Query: 244 TVGQGPEEKGMLRETGFDISVASEIMAVLALTTSLADMRERLGNMVVGNSK 294
            +GQG +EKGM+RETGFDISVASEI+AVLALTTSLADMR+RLG MV+GN++
Sbjct: 242 AIGQGLDEKGMVRETGFDISVASEIVAVLALTTSLADMRKRLGKMVIGNTR 292