Jatropha Genome Database

JcCB0041791.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041791.20 - phase: 0 
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g09850.1                                                       202   2e-52
Glyma11g18410.1                                                       197   4e-51

>Glyma12g09850.1 
          Length = 191

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/193 (61%), Positives = 137/193 (70%), Gaps = 4/193 (2%)

Query: 1   MATTVHFSPFFCAAFSSNKNLNKCCFGSVEARKSSFR-SFKARAIKEKTEERKNPQXXXX 59
           M T++      CAA  S      C   S  + KS  +  F+ RA+KEKTEE ++P     
Sbjct: 1   MTTSLLLPSPSCAAILSKGTNRICTRASFHSLKSHVKKGFRVRALKEKTEEIESPSQPSS 60

Query: 60  XXAEEIAKKYGLEAGLWKIFSTKEE-QDGEEKKSKGEQAKELLAKYGGAYXXXXXXXXXX 118
              EE+ KKYGLEAGLW+IFS+KEE +D  ++KSKG+QAKELLAKYGGAY          
Sbjct: 61  --PEEVTKKYGLEAGLWQIFSSKEEGKDNSQQKSKGDQAKELLAKYGGAYLATSITLSLI 118

Query: 119 XXXXCYALISAGIDVQALLQKVGISTDEAGEKVGTFALAYAAHKAASPIRFPPTVALTPV 178
               CYALISAGIDVQALLQKVGISTD  GEKVGTFALAYAAHKAASPIRFPPTVALTP+
Sbjct: 119 SFALCYALISAGIDVQALLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPI 178

Query: 179 VASWIGKKVDQDK 191
           VA WIGKKV++DK
Sbjct: 179 VAGWIGKKVEKDK 191


>Glyma11g18410.1 
          Length = 192

 Score =  197 bits (502), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/194 (59%), Positives = 136/194 (70%), Gaps = 5/194 (2%)

Query: 1   MATTVHFSPFFCAAFSSNKNLNKCCFGSVEARKSSFR-SFKARAIKEKTEERKNPQXXXX 59
           M T++      CA+  S      C   S    KS  +  F+ RA+KEKTEE ++P     
Sbjct: 1   MTTSLLLPSPSCASILSKGTNRICTRASFHTLKSHVKKGFRVRALKEKTEEIESPSQQSS 60

Query: 60  XXAEEIAKKYGLEAGLWKIFSTKEE--QDGEEKKSKGEQAKELLAKYGGAYXXXXXXXXX 117
              EE+ KKYGLEAGLW+IFS+KEE   + E++KSKG+QAKELLAKYGGAY         
Sbjct: 61  --PEEVTKKYGLEAGLWQIFSSKEEGKDNSEQQKSKGDQAKELLAKYGGAYLATSITLSL 118

Query: 118 XXXXXCYALISAGIDVQALLQKVGISTDEAGEKVGTFALAYAAHKAASPIRFPPTVALTP 177
                CYALISAGIDVQ+LLQKVGISTD  GEKVGTFALAYAAHKAASPIRFPPTVALTP
Sbjct: 119 ISFALCYALISAGIDVQSLLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTP 178

Query: 178 VVASWIGKKVDQDK 191
           ++A WIGKKV++DK
Sbjct: 179 ILAGWIGKKVEKDK 192