Jatropha Genome Database

JcCB0041791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041791.10 + phase: 0 /pseudo/partial
         (296 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g09860.1                                                       300   1e-81
Glyma02g35850.1                                                       292   2e-79
Glyma10g09410.1                                                       282   3e-76
Glyma11g18400.1                                                       277   1e-74
Glyma02g35850.2                                                       263   1e-70
Glyma04g02720.2                                                       122   4e-28
Glyma04g02720.1                                                       122   4e-28
Glyma06g02740.1                                                       108   9e-24
Glyma10g11780.1                                                        72   5e-13
Glyma16g19460.1                                                        59   8e-09

>Glyma12g09860.1 
          Length = 450

 Score =  300 bits (768), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 159/228 (69%), Positives = 176/228 (77%), Gaps = 6/228 (2%)

Query: 69  QIRXTNKMQERLRDLSEDENNQKWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPD 128
           QIR   +MQERLRDLSEDENN K LFVTEEDIK+LP  QNETLIAIKAPHGTTLEVPDPD
Sbjct: 229 QIR---EMQERLRDLSEDENNDKLLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPD 285

Query: 129 EAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEIQGVEPPPNYPSSSGFNENMDTTMI 188
           EAVDY QRRYRIVLRSTMGPID+YLVSQFEEKFEEI G +  P  PSS    +   +T++
Sbjct: 286 EAVDYLQRRYRIVLRSTMGPIDLYLVSQFEEKFEEINGADVAPKLPSSPDVTKQQ-STVV 344

Query: 189 PGESRGKEIEMQGQDSNRMCSDLTTSQDFVSGLMKIVPSEVDSDADYWLLSDADVSITDM 248
           P E RGK IE+QGQ +    SD T SQDFVSG+MKIVPS+V S+ADYWLLSDADVSITDM
Sbjct: 345 P-EDRGKHIEVQGQAAPGPSSDFTPSQDFVSGIMKIVPSDVASEADYWLLSDADVSITDM 403

Query: 249 WRTEPGVEWNEFGTLQDDYGMANVSTPQPQTPPLNPAEVPPNANTTAG 296
           WRTEPGVEWNE   LQ+DY M + +T  P  P  N  EV   +  T G
Sbjct: 404 WRTEPGVEWNELEPLQEDYCMTDENTTTPSHPS-NVGEVSSASKPTGG 450


>Glyma02g35850.1 
          Length = 468

 Score =  292 bits (748), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 150/221 (67%), Positives = 172/221 (77%), Gaps = 8/221 (3%)

Query: 69  QIRXTNKMQERLRDLSEDENNQKWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPD 128
           QIR   +MQERLR+LSE+ENNQK LFVTEEDIK LP  QNETLIAIKAPHGTTLEVPDP+
Sbjct: 246 QIR---EMQERLRNLSENENNQKCLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPE 302

Query: 129 EAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEIQGVE-PPPNYPSSSGFNENMDTTM 187
           EAVDYPQRRYRI+LRSTMGPIDVYL+SQFEEKFEE+ G E P     SSSG NE + T M
Sbjct: 303 EAVDYPQRRYRIILRSTMGPIDVYLISQFEEKFEEVNGAELPMIPLASSSGSNEQLMTEM 362

Query: 188 IPGESRGKEIEMQGQDSNRMCSDLTTSQDFVSGLMKIVPSEVDSDADYWLLSDADVSITD 247
           +P E  GKE+E Q Q S+   SDL  SQ+F  G+MKIVPS+VD+DADYWLLSDADVSITD
Sbjct: 363 VPAECSGKELEPQTQLSSHAFSDLNASQEFAGGMMKIVPSDVDNDADYWLLSDADVSITD 422

Query: 248 MWRTEPGVEWNEFGTLQDDYGMANVSTPQPQTPPLNPAEVP 288
           MWRT+  V+WN    L  D+G+ +    +PQ+P    AEVP
Sbjct: 423 MWRTDSTVDWNGIDMLHPDFGIIS----RPQSPSSGLAEVP 459


>Glyma10g09410.1 
          Length = 466

 Score =  282 bits (722), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 148/224 (66%), Positives = 171/224 (76%), Gaps = 10/224 (4%)

Query: 69  QIRXTNKMQERLRDLSEDENNQKWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPD 128
           QIR   +MQERLR+LSE+ENNQK LFVTEEDIK LP  QNETLIAIKAPHGTTLEVPDP+
Sbjct: 246 QIR---EMQERLRNLSENENNQKCLFVTEEDIKDLPCFQNETLIAIKAPHGTTLEVPDPE 302

Query: 129 EAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEIQGVE-PPPNYPSSSGFNENMDTTM 187
           EAVDYPQRRYRI+LRSTMGPIDVYL+SQFEEKFEE+ G E P     SSSG NE + T +
Sbjct: 303 EAVDYPQRRYRIILRSTMGPIDVYLISQFEEKFEEVNGAELPMIPLASSSGSNEQLMTEI 362

Query: 188 IPGESRGKEIEMQGQDSNRMCSDLTTSQDFVSGLMKIVPSEVDSDADYWLLSDADVSITD 247
           +  E  GKE+E Q Q S+   SD   SQ+F  G+MKIVPS+VD+DADYWLLSDAD+SITD
Sbjct: 363 VTAECSGKELEPQTQLSSHAFSD--ASQEFAGGMMKIVPSDVDNDADYWLLSDADISITD 420

Query: 248 MWRTEPGVEWNEFGTLQDDYGMANVSTPQPQTPPLNPAEVPPNA 291
           MWRT+  V+WN    L  D+G+ +    +PQTP    AEVP  A
Sbjct: 421 MWRTDSSVDWNGVDMLHPDFGVIS----RPQTPSSGFAEVPSTA 460


>Glyma11g18400.1 
          Length = 296

 Score =  277 bits (708), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/206 (69%), Positives = 163/206 (79%), Gaps = 3/206 (1%)

Query: 91  KWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPID 150
           + LFVTEEDIK+LP  QNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPID
Sbjct: 94  RLLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPID 153

Query: 151 VYLVSQFEEKFEEIQGVEPPPNYPSSSGFNENMDTTMIPGESRGKEIEMQGQDSNRMCSD 210
           +YLVSQFEEKFEEI GV+  P  PSS    ++  +T++P E RGK+IE+QGQ++    SD
Sbjct: 154 LYLVSQFEEKFEEINGVDVAPKLPSSPDGTKHQ-STVVP-EDRGKDIEVQGQEAPGPSSD 211

Query: 211 LTTSQDFVSGLMKIVPSEVDSDADYWLLSDADVSITDMWRTEPGVEWNEFGTLQDDYGMA 270
            TTSQDFVSG+MKIVPS+V S+ADYWLLSDADVSITDMWRTEPGVEWNE   LQ+DY M 
Sbjct: 212 FTTSQDFVSGIMKIVPSDVASEADYWLLSDADVSITDMWRTEPGVEWNELEPLQEDYCMT 271

Query: 271 NVSTPQPQTPPLNPAEVPPNANTTAG 296
             +T  P  P  N  EV     +T G
Sbjct: 272 RENTATPSHPS-NVDEVSSAPKSTGG 296


>Glyma02g35850.2 
          Length = 421

 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 133/199 (66%), Positives = 153/199 (76%), Gaps = 5/199 (2%)

Query: 91  KWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPID 150
           + LFVTEEDIK LP  QNETLIAIKAPHGTTLEVPDP+EAVDYPQRRYRI+LRSTMGPID
Sbjct: 218 RCLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPID 277

Query: 151 VYLVSQFEEKFEEIQGVEPPPN-YPSSSGFNENMDTTMIPGESRGKEIEMQGQDSNRMCS 209
           VYL+SQFEEKFEE+ G E P     SSSG NE + T M+P E  GKE+E Q Q S+   S
Sbjct: 278 VYLISQFEEKFEEVNGAELPMIPLASSSGSNEQLMTEMVPAECSGKELEPQTQLSSHAFS 337

Query: 210 DLTTSQDFVSGLMKIVPSEVDSDADYWLLSDADVSITDMWRTEPGVEWNEFGTLQDDYGM 269
           DL  SQ+F  G+MKIVPS+VD+DADYWLLSDADVSITDMWRT+  V+WN    L  D+G+
Sbjct: 338 DLNASQEFAGGMMKIVPSDVDNDADYWLLSDADVSITDMWRTDSTVDWNGIDMLHPDFGI 397

Query: 270 ANVSTPQPQTPPLNPAEVP 288
            +    +PQ+P    AEVP
Sbjct: 398 IS----RPQSPSSGLAEVP 412


>Glyma04g02720.2 
          Length = 343

 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 105/178 (58%), Gaps = 9/178 (5%)

Query: 75  KMQERLRDLSEDENNQKWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPDEAVDYP 134
           K QE LR+L E E++QK+LF+T+EDI  LP  QN+ +IAIKAP  +++EVPDPDE + + 
Sbjct: 175 KKQELLRNLEESESSQKYLFITKEDILGLPCFQNQEIIAIKAPKASSIEVPDPDEELGFR 234

Query: 135 QRRYRIVLRSTMGPIDVYLVSQFEEKFEEIQGVEPPPNYPSSSGFNENMDTTMIPGESRG 194
           QR+Y++++RS +GPI +YL+S+ + KFE+       P   ++  +N ++         RG
Sbjct: 235 QRQYKMIVRSAIGPIYLYLLSKDDHKFEDDSA---KPMKLTNPSWNSDL------YRKRG 285

Query: 195 KEIEMQGQDSNRMCSDLTTSQDFVSGLMKIVPSEVDSDADYWLLSDADVSITDMWRTE 252
             +     D N      +       G+ +I P++ + + DYW  SD  VS T++W  E
Sbjct: 286 VGLLESQNDENNPSERFSLQGSQAFGIQEITPTDFEMEDDYWFQSDPGVSQTELWGKE 343


>Glyma04g02720.1 
          Length = 343

 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 105/178 (58%), Gaps = 9/178 (5%)

Query: 75  KMQERLRDLSEDENNQKWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPDEAVDYP 134
           K QE LR+L E E++QK+LF+T+EDI  LP  QN+ +IAIKAP  +++EVPDPDE + + 
Sbjct: 175 KKQELLRNLEESESSQKYLFITKEDILGLPCFQNQEIIAIKAPKASSIEVPDPDEELGFR 234

Query: 135 QRRYRIVLRSTMGPIDVYLVSQFEEKFEEIQGVEPPPNYPSSSGFNENMDTTMIPGESRG 194
           QR+Y++++RS +GPI +YL+S+ + KFE+       P   ++  +N ++         RG
Sbjct: 235 QRQYKMIVRSAIGPIYLYLLSKDDHKFEDDSA---KPMKLTNPSWNSDL------YRKRG 285

Query: 195 KEIEMQGQDSNRMCSDLTTSQDFVSGLMKIVPSEVDSDADYWLLSDADVSITDMWRTE 252
             +     D N      +       G+ +I P++ + + DYW  SD  VS T++W  E
Sbjct: 286 VGLLESQNDENNPSERFSLQGSQAFGIQEITPTDFEMEDDYWFQSDPGVSQTELWGKE 343


>Glyma06g02740.1 
          Length = 325

 Score =  108 bits (269), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 30/175 (17%)

Query: 75  KMQERLRDLSEDENNQKWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPDEAVDYP 134
           K QE LR+L E E++QK+LF+T+EDI SLP  QN+ +IAIKAP  + +EVPDPDE + + 
Sbjct: 176 KKQELLRNLEESESSQKYLFLTKEDILSLPCFQNQEIIAIKAPKASCIEVPDPDEELGFR 235

Query: 135 QRRYRIVLRSTMGPIDVYLVSQFEEKFEEIQGVEPPPNYPSSSGFNENMDTTMIPGESRG 194
           QR+Y++++RS +GPI++YL+S+FE+                S+   + MD +      R 
Sbjct: 236 QRQYKMIVRSAIGPINLYLLSKFED---------------DSAKRMKLMDPSWNSDPIR- 279

Query: 195 KEIEMQGQDSNRMCSDLTTSQDFVSGLMKIVPSEVDSDADYWLLSDADVSITDMW 249
                      R+C  +    +F   L +I+    D   DYW  SD  VS T++W
Sbjct: 280 ----------KRVCR-VHKHLEFKKLLPRILKYMED---DYWFQSDPGVSQTELW 320


>Glyma10g11780.1 
          Length = 228

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 23/150 (15%)

Query: 103 LPSLQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFE 162
           L  L N+ +IAIKAP  + +EVPDPDE        Y++++RS +GPI++YL+S+ + KFE
Sbjct: 94  LRYLINQEIIAIKAPKASCIEVPDPDE--------YKMIVRSAIGPINLYLLSKDDRKFE 145

Query: 163 EIQGVEPPPNYPSSSGFNENMDTTMIPGESRGKEIEMQGQDSNRMCSD---LTTSQDFVS 219
           +          PS   +N +      P   RG  + ++ Q   +  S+   L  SQ F  
Sbjct: 146 DDSAKRMKLMDPS---WNSD------PIRKRGVGL-LESQHDEKNPSERFSLQGSQAF-- 193

Query: 220 GLMKIVPSEVDSDADYWLLSDADVSITDMW 249
           G+ +I P+  + + DYW  SD  VS T++W
Sbjct: 194 GIQEITPTGFEMEDDYWFQSDPGVSQTELW 223


>Glyma16g19460.1 
          Length = 224

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 33/41 (80%)

Query: 91  KWLFVTEEDIKSLPSLQNETLIAIKAPHGTTLEVPDPDEAV 131
           ++LF+ +EDI SLP  QN+ +IAIKAP  + +EVPDPDEAV
Sbjct: 120 RYLFLIKEDILSLPCFQNQEIIAIKAPKASCIEVPDPDEAV 160