Jatropha Genome Database

JcCB0037771.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0037771.30 + phase: 1 /TE/partial
         (610 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g41350.1                                                        52   3e-06
Glyma03g13510.1                                                        51   3e-06
Glyma05g17700.1                                                        50   7e-06

>Glyma08g41350.1 
          Length = 2794

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 378  PEHKPVKXK-RKNRTLICQKVIAIEVDKLINASFTREVHYSQWLVNVVLVPKLNGKWRLC 436
            PE  PVK K R+ R  +  K I  EV K I+A F     Y QWL N+V VPK +GK R+C
Sbjct: 1757 PECPPVKQKLRRTRPDMALK-IKEEVQKQIDAGFLVTSEYPQWLANIVPVPKRDGKVRMC 1815

Query: 437  VD 438
            VD
Sbjct: 1816 VD 1817


>Glyma03g13510.1 
          Length = 2728

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 15/140 (10%)

Query: 121  HVHFPYFDALVVEGMMENYNVRRMLIDDGSSVNLITLEVFKALKLDITKIKSMXTPLEGL 180
            HV   Y D +V           ++LID+GSS+N++     + L  + + +K     +   
Sbjct: 887  HVSVKYMDHIVA----------KVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAF 936

Query: 181  AGRQVSMEGSLEIALELKDREHTRTEMPKFVVMDIPFPDYAILGRPLFYTLGTYTSIRYL 240
             G +  + G +++ +++       T    F +MDI  P   +LGRP  Y++G   S  + 
Sbjct: 937  DGTRREVRGEIDVLVQIGPHTCQVT----FQIMDINPPYSCLLGRPWIYSVGVVPSTLHQ 992

Query: 241  VMKFYSNSGDIIIVRGNQKV 260
             +KF    G ++IV G + +
Sbjct: 993  KLKFVVE-GHLVIVSGEEDI 1011


>Glyma05g17700.1 
          Length = 2786

 Score = 50.1 bits (118), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 5/120 (4%)

Query: 141  VRRMLIDDGSSVNLITLEVFKALKLDITKIKSMXTPLEGLAGRQVSMEGSLEIALELKDR 200
            V ++LID+GSS+N++     + L  +++ +K     +    G +  + G +++ +++   
Sbjct: 906  VAKVLIDNGSSLNVMPKSTLEKLPFNVSHLKPSSMVVRAFDGTRREVRGEIDLPVQIGPH 965

Query: 201  EHTRTEMPKFVVMDIPFPDYAILGRPLFYTLGTYTSIRYLVMKFYSNSGDIIIVRGNQKV 260
                T    F +MDI  P   +LGRP  +++G   S  +  +KF    G ++IV G + +
Sbjct: 966  TCQVT----FQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVE-GHLVIVSGEEDI 1020