Jatropha Genome Database

JcCB0036911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0036911.10 + phase: 0 /TE/partial
         (268 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g10210.1                                                        82   5e-16
Glyma01g03440.1                                                        75   1e-13
Glyma14g06490.1                                                        67   2e-11
Glyma06g17970.1                                                        66   4e-11
Glyma18g14690.1                                                        60   2e-09
Glyma17g29280.1                                                        57   2e-08
Glyma06g00270.1                                                        57   3e-08
Glyma01g03510.1                                                        53   3e-07
Glyma14g29560.1                                                        53   4e-07
Glyma01g24910.1                                                        52   6e-07

>Glyma08g10210.1 
          Length = 304

 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 102/251 (40%), Gaps = 31/251 (12%)

Query: 13  LCEKARLCWTLTGIPLD-----RSTTDFRDMLLGLIDRRSTEQCSFFSVLCYFIWFDRNR 67
           LC K    W   G+  D      S   F+D++  L+     + CSF   +   +W  RN 
Sbjct: 51  LCGKTFKIWIAKGLWTDIDGLILSMESFKDLVFELMISLPEKFCSFVITMTS-VWKSRNE 109

Query: 68  RVWQQINVDPYNIVMAATSFLREWKNAQLNRSNSSVPLASXXXXXXXXXXXXKCNFDAAI 127
            +W         I+  A + L EWK  Q                        KCN D A 
Sbjct: 110 YIWNNKEETKIGIIQRADTVLSEWKAVQF------------VQWLKPPNRFWKCNVDTAF 157

Query: 128 HATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNIERVLVE 187
              EG+S +   +RD+ G+F++A TG    VL+    EA  + + L WL  +NI  +  +
Sbjct: 158 MDEEGKSGFGACLRDDTGEFMMAKTGWMNAVLRVKEGEAHAILQSLLWLTNQNIPNIKSK 217

Query: 188 TDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHALARVACLH 247
            + +        GF        +L +I+ ++    S  + + RRQ N  A +LAR + L 
Sbjct: 218 EEDI-----TGCGF--------ILNQIRDILRSYPSYSIEYVRRQANLVADSLARNSFLF 264

Query: 248 PCFRLWDSIPQ 258
              R++ + P 
Sbjct: 265 EQHRIFLNTPH 275


>Glyma01g03440.1 
          Length = 430

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 3/216 (1%)

Query: 31  STTDFRDMLLGLIDRRSTEQCSFFSVLCYFIWFDRNRRVWQQINVDPYNIVMAATSFLRE 90
           S  D   ++  ++ + ST +      + + +W  RN ++W+ ++      +      L+E
Sbjct: 213 SLEDMHSIIFYILGKFSTSKVEEIVTVLWCLWRRRNEKLWEGVSKPVGLSLQQVFKHLQE 272

Query: 91  WKNAQLNRSNSSVPLASXXXXXXXX--XXXXKCNFDAAIHATEGRSSYAGLIRDEAGQFL 148
           WK  Q  R N++   +               KCN DA +   E +   A  I +E G F 
Sbjct: 273 WK-TQHKRPNTATSHSPHRNSKWSKPPINYMKCNIDAVLFHEENKFGVAACIHEEEGMFA 331

Query: 149 IACTGHFAGVLQPHIAEAIGLREVLYWLLMRNIERVLVETDCLRLFQAVTTGFEPYSDWA 208
           +A T  F G   P  AEA+     L  +  + +  +++ETDC  +  A         +  
Sbjct: 332 VAATSWFHGQPTPQEAEAVAFLFALNGIKEQQLGNIVIETDCKAISDAFKAQQFDNFEAG 391

Query: 209 PVLEEIKQLISQLSSCELVWARRQVNKPAHALARVA 244
            +L+     IS + +C + +  +Q N+ AH+LAR +
Sbjct: 392 CILKICNTQISDIHNCSIQFVSKQANQVAHSLARAS 427


>Glyma14g06490.1 
          Length = 165

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 5/164 (3%)

Query: 34  DFRDMLLGLIDRRSTEQCSFFSVLCYFIWFDRNRRVWQQINVDPYNIVMAATSFLREWKN 93
           D RD++  L+        S  S+  + IW ++N +VW   +  P   V  +  +L EW++
Sbjct: 2   DIRDLIFNLLQHFQPSLLSKVSITLWAIWKNKNDKVWNGHDATPSISVDLSNQYLAEWQS 61

Query: 94  AQLNRSNSSVPLASXXXX---XXXXXXXXKCNFDAAIHATEGRSSYAGLIRDEAGQFLIA 150
            +   SN  +PL S               KCN D AI A++  S     IRD+   F+  
Sbjct: 62  VR-QVSNGQLPLTSIIQEQQWQKPAISFLKCNLDVAIFASDN-SGICLCIRDDQATFIKE 119

Query: 151 CTGHFAGVLQPHIAEAIGLREVLYWLLMRNIERVLVETDCLRLF 194
            T  F GV +P  AEA  L + L W      + V +     +LF
Sbjct: 120 KTSTFGGVPKPAEAEAWTLYQTLQWTTWLGYQNVFLRVIANQLF 163


>Glyma06g17970.1 
          Length = 270

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 4/165 (2%)

Query: 83  AATSFLREWKNAQ-LNRSNSSVPLASXXXX-XXXXXXXXKCNFDAAIHATEGRSSYAGL- 139
           A   F+ +WKN+  +N    S P  +             +CN DAAI   + +   AGL 
Sbjct: 104 ALGEFVNQWKNSNTINHQQQSSPETTMLTTWSPPSRNQVECNVDAAIFE-DVKQFGAGLC 162

Query: 140 IRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNIERVLVETDCLRLFQAVTT 199
           +RDE G FL A T    GV  P  AEA  L + + W     ++ V+ E DC  +   +  
Sbjct: 163 LRDEKGNFLKAFTATTTGVPTPREAEAWALHQAINWTHHLGMQNVIFELDCKLVVDNMVN 222

Query: 200 GFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHALARVA 244
             +  +++  +L   + ++S   +  + + +RQ N   H LAR +
Sbjct: 223 NKKGSTEFHAILHRCRAILSNSPNSRMSFEKRQANLITHNLARAS 267


>Glyma18g14690.1 
          Length = 278

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%)

Query: 120 KCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMR 179
           KCN D A    +        I+D+ G F+ A      G+ + H  EA+ L + L WL   
Sbjct: 143 KCNIDVAYFQEQQWWGKGMCIQDDKGWFVRATMNIRHGMPEVHEGEALVLLQTLTWLKNM 202

Query: 180 NIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHA 239
           + + V VE+DC RL  ++       S++  +L + K+++    + ++   R+Q N  AH+
Sbjct: 203 DYQYVEVESDCKRLTDSLDRNIMDDSEFGMILNKCKRILMSFPNHKVSLIRKQANCIAHS 262

Query: 240 LARVACLH 247
           LAR + L+
Sbjct: 263 LARASKLY 270


>Glyma17g29280.1 
          Length = 865

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 9/194 (4%)

Query: 36  RDMLLGLIDRRSTEQCSFFSVLCYFIWFDRNRRVWQQINVDPYNIVMAA--------TSF 87
           ++ +  L+  +  ++    ++  + IW  RN+ +W Q    P   +  A         S 
Sbjct: 184 KEAVFELLHVQQEQKKKIIALTLWSIWKSRNQMIWDQQQPQPKMAISMAMLCSSSMNGSR 243

Query: 88  LREWKNAQLNRSNSSVPLASXXXXXXXXXXXXKCNFDAAIHATEGRSSYAGLIRDEAGQF 147
           L    NA     NS+ P A             KCN DA+I   E        + D+ G F
Sbjct: 244 LSVRSNAGNFLPNSADP-AGNIAWSPPPLGSLKCNVDASIFKEEPSFGIGMCLHDDNGTF 302

Query: 148 LIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNIERVLVETDCLRLFQAVTTGFEPYSDW 207
           + A T     + +P  AEA  L++ L W+   +++ V+VETDC  +   + +  +  SD+
Sbjct: 303 VKARTASSMSIPKPDEAEAFALKKSLEWIQSLHLQNVVVETDCKLVTDHIDSRQKGLSDF 362

Query: 208 APVLEEIKQLISQL 221
             +L  +  L  Q+
Sbjct: 363 ILILANLISLGLQV 376


>Glyma06g00270.1 
          Length = 395

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 55/261 (21%)

Query: 3   EIETTMHMLFLCEKARLCWTLTGIPLDRSTTDFRDMLLGLIDRRSTEQCSFFSVLCYFIW 62
            IETT H+L  C ++ +CW   G+ L         +LL L D+  +E  S  S+L + +W
Sbjct: 176 NIETTSHILATCSQSIICWKTIGLDL---------ILLRLFDQLKSEDQSRVSMLLWSLW 226

Query: 63  FDRNRRVWQQINVDPYNIV-MAATSFLREWKNAQ---LNRSNSS--------VPLASXXX 110
             RN++VW    +    ++  A   F ++W +A+   + R +          VP  +   
Sbjct: 227 RKRNKKVWDNKLLSESKVIQQAGDMFYQDWMSAKDLSVTRGHEQHNHYRVQWVPPPT--- 283

Query: 111 XXXXXXXXXKCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLR 170
                    KCN DA+                      I     F G ++  +A ++ + 
Sbjct: 284 ------GALKCNLDASFF------------------IYIQSWKAFYGKVRMEVASSVSVG 319

Query: 171 EVLYWLLMRNIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWAR 230
                L+      V  E+DC  L   V +     S    +++E ++L+       LV+ +
Sbjct: 320 RRSMGLM------VYFESDCKTLVDKVNSNNLDLSKAGVLIQESRKLLLLNQIYHLVFVK 373

Query: 231 RQV-NKPAHALARVACLHPCF 250
           RQ  N  A +LARVA    C 
Sbjct: 374 RQASNVVAQSLARVATSISCL 394


>Glyma01g03510.1 
          Length = 322

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 18/128 (14%)

Query: 38  MLLGLIDRRSTEQCSFFSVLCYFIWFDRNRRVWQQINVDPYNIVMAATSFLREWKNAQLN 97
           +LLGLI   S             IW D+N ++W    V P   +  A  FL +WK+A+ +
Sbjct: 207 LLLGLIKPYSVS-----------IWHDKNEKIWSDTEVHPQQSISRALQFLHKWKHARKS 255

Query: 98  RSNSSVPLASXXXXXXXXXXXX-KCNFDAAIHATEGRSSYAGLIRDEAGQFLIA---CTG 153
           + +S+                  KCN DAAI  +  +   A  + D  GQF+ A   CT 
Sbjct: 256 QLHSTPHTPQHAPNMKKPQIGFWKCNVDAAIFTSSNKFGVALCLSDHHGQFIQAKCICTD 315

Query: 154 HFAGVLQP 161
              G L+P
Sbjct: 316 ---GTLEP 320


>Glyma14g29560.1 
          Length = 128

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 53/105 (50%)

Query: 130 TEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMRNIERVLVETD 189
           T G+S    +IRD   +F IA +G     +  ++ EA+G  +VL W+   +I  ++ + D
Sbjct: 23  TRGKSLDGAVIRDYKEEFTIAWSGWSQSYMTIYMGEAVGFLQVLQWIWSLDIFHIIFKMD 82

Query: 190 CLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVN 234
           C  +   +  G +  S+   + +E ++++    +  L + RRQ N
Sbjct: 83  CKVVVDRINKGTQDTSETGSINQECRRILESFPNFSLEFIRRQAN 127


>Glyma01g24910.1 
          Length = 342

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 14/125 (11%)

Query: 120 KCNFDAAIHATEGRSSYAGLIRDEAGQFLIACTGHFAGVLQPHIAEAIGLREVLYWLLMR 179
           KCN D  +   + ++S+             A T +  G   P   +A GL + + W++  
Sbjct: 231 KCNIDVTLF--QDQNSFG------------AKTFYSNGFPDPRTTKAWGLLQAMNWMVDL 276

Query: 180 NIERVLVETDCLRLFQAVTTGFEPYSDWAPVLEEIKQLISQLSSCELVWARRQVNKPAHA 239
            +E V+ E DC  + +A+    + Y D+  ++ + K  +S  ++  + + R+Q N+ AH 
Sbjct: 277 CMENVIFEVDCEAILKAILKPIKGYLDFHYIISKCKDYLSNHTNSLVSFKRKQTNQVAHT 336

Query: 240 LARVA 244
           LAR +
Sbjct: 337 LARAS 341