Jatropha Genome Database

JcCB0036391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0036391.10 + phase: 0 /pseudo
         (461 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g28980.1                                                       675   0.0  
Glyma10g38760.1                                                       669   0.0  
Glyma20g28980.2                                                       600   e-171
Glyma13g06940.1                                                       572   e-163
Glyma13g06940.2                                                       509   e-144
Glyma19g05020.1                                                       468   e-132

>Glyma20g28980.1 
          Length = 466

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/474 (70%), Positives = 377/474 (79%), Gaps = 25/474 (5%)

Query: 1   MASISNLFVKTPSISHSLPKSFNNHFAPPLRVSFSPKLHSKRLARIRA--GLIEPDGGKL 58
           MAS++  F +T   SHSL K+F+ HFAP  +V+      ++R   +R    LIEPDGGKL
Sbjct: 1   MASMATFFTQTSFPSHSLSKTFDTHFAPSPKVNVFANFPARRHVGVRVSNALIEPDGGKL 60

Query: 59  VELFV-DKSQKDVRRKEAISLPKITLTKIDRQWVHVLSXGWASPLSGFMRESRVPPKLFI 117
           VEL V D S++D+++ EA+SLP+I L++ID +WVHVLS GWA+PL GFMRE+     L  
Sbjct: 61  VELVVRDNSERDLKKGEALSLPRIKLSRIDLEWVHVLSEGWATPLRGFMREAEFLQTLHF 120

Query: 118 LMPSVSKTGRLLTC------------RCRLCSPSTICRSNGSASPKGSLSSILTIRRLQF 165
               +   G ++              + ++     +   +    P   L+ +        
Sbjct: 121 NSLRLDD-GSVVNMSVPIVLAIDDAQKHKIGDNKRVALFDSKGDPVAILNDV-------- 171

Query: 166 *TIYKHPKEERIARTWGTTAPGLPYVEETIKKSGNWLIGGDLEVIEPIKYHDGLDRFRLS 225
             IYKHPKEERIARTWGTTAPGLPYVE+TI  +GNWLIGGDLEVIEPI+Y+DGLD FRLS
Sbjct: 172 -EIYKHPKEERIARTWGTTAPGLPYVEQTITNAGNWLIGGDLEVIEPIQYNDGLDHFRLS 230

Query: 226 PAELRKEFTKRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGGYTK 285
           PAELR EFT+RNADAVFAFQLRNPVHNGHALLMTDTR+RLLEMGYKNPVLLLHPLGGYTK
Sbjct: 231 PAELRAEFTRRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPVLLLHPLGGYTK 290

Query: 286 ADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYI 345
           ADDVPL WRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYI
Sbjct: 291 ADDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYI 350

Query: 346 VGRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPTR 405
           VGRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPF+VAAYDKTQGKMAFFDP+R
Sbjct: 351 VGRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSR 410

Query: 406 PQDFLFISGTKMRTLAKNKENPPDGFMCPGGWNVLVEYYDSLAPADNGKVPEPV 459
           PQDFLFISGTKMRTLA+NKE+PPDGFMCPGGW VLVEYYDSL  + NGKVPE V
Sbjct: 411 PQDFLFISGTKMRTLARNKESPPDGFMCPGGWKVLVEYYDSLVLSSNGKVPEAV 464


>Glyma10g38760.1 
          Length = 465

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/473 (69%), Positives = 372/473 (78%), Gaps = 24/473 (5%)

Query: 1   MASISNLFVKTPSISHSLPKSFNNHFAPPLRVSFSPKLHSKRLARIRA--GLIEPDGGKL 58
           M S++  F +T   SHSL K+F+ HFAP  +V+      ++R   +R    LIEPDGGKL
Sbjct: 1   MTSMATFFAQTSFPSHSLSKTFDTHFAPAPKVNVFVNFRARRHVGVRVSNALIEPDGGKL 60

Query: 59  VELFVDKSQKDVRRKEAISLPKITLTKIDRQWVHVLSXGWASPLSGFMRESRVPPKLFIL 118
           VEL V   ++D+++ EA+SLP+I L++ID +WVHVLS GWA+PL GFMRE+     L   
Sbjct: 61  VELVVTDFERDLKKGEALSLPRIKLSRIDLEWVHVLSEGWATPLKGFMREAEFLQTLHFN 120

Query: 119 MPSVSKTGRLLTC------------RCRLCSPSTICRSNGSASPKGSLSSILTIRRLQF* 166
              +   G ++              + R+     +   +    P   L++I         
Sbjct: 121 SLRLDD-GSVVNMSVPIVLAIDDAQKHRIGDNKKVALFDSKGDPVAILNNI--------- 170

Query: 167 TIYKHPKEERIARTWGTTAPGLPYVEETIKKSGNWLIGGDLEVIEPIKYHDGLDRFRLSP 226
            IYKHPKEERIARTWGT APGLPYVE+TI  +GNWLIGGDLEVIEPI+Y+DGLD FRLSP
Sbjct: 171 EIYKHPKEERIARTWGTIAPGLPYVEQTITNAGNWLIGGDLEVIEPIQYNDGLDHFRLSP 230

Query: 227 AELRKEFTKRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGGYTKA 286
            +LR EFT+RNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGGYTKA
Sbjct: 231 TQLRAEFTRRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGGYTKA 290

Query: 287 DDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 346
           DDVPL WRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV
Sbjct: 291 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 350

Query: 347 GRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPTRP 406
           GRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPF+VAAYDKTQGKMAFFDP+RP
Sbjct: 351 GRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRP 410

Query: 407 QDFLFISGTKMRTLAKNKENPPDGFMCPGGWNVLVEYYDSLAPADNGKVPEPV 459
           QDFLFISGTKMRTLA+NKE+PPDGFMCPGGW VLV+YYDSL  + NGKV E V
Sbjct: 411 QDFLFISGTKMRTLARNKESPPDGFMCPGGWKVLVDYYDSLVLSSNGKVQEAV 463


>Glyma20g28980.2 
          Length = 452

 Score =  600 bits (1546), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 299/432 (69%), Positives = 340/432 (78%), Gaps = 25/432 (5%)

Query: 1   MASISNLFVKTPSISHSLPKSFNNHFAPPLRVSFSPKLHSKRLARIRA--GLIEPDGGKL 58
           MAS++  F +T   SHSL K+F+ HFAP  +V+      ++R   +R    LIEPDGGKL
Sbjct: 1   MASMATFFTQTSFPSHSLSKTFDTHFAPSPKVNVFANFPARRHVGVRVSNALIEPDGGKL 60

Query: 59  VELFV-DKSQKDVRRKEAISLPKITLTKIDRQWVHVLSXGWASPLSGFMRESRVPPKLFI 117
           VEL V D S++D+++ EA+SLP+I L++ID +WVHVLS GWA+PL GFMRE+     L  
Sbjct: 61  VELVVRDNSERDLKKGEALSLPRIKLSRIDLEWVHVLSEGWATPLRGFMREAEFLQTLHF 120

Query: 118 LMPSVSKTGRLLTC------------RCRLCSPSTICRSNGSASPKGSLSSILTIRRLQF 165
               +   G ++              + ++     +   +    P   L+ +        
Sbjct: 121 NSLRLDD-GSVVNMSVPIVLAIDDAQKHKIGDNKRVALFDSKGDPVAILNDV-------- 171

Query: 166 *TIYKHPKEERIARTWGTTAPGLPYVEETIKKSGNWLIGGDLEVIEPIKYHDGLDRFRLS 225
             IYKHPKEERIARTWGTTAPGLPYVE+TI  +GNWLIGGDLEVIEPI+Y+DGLD FRLS
Sbjct: 172 -EIYKHPKEERIARTWGTTAPGLPYVEQTITNAGNWLIGGDLEVIEPIQYNDGLDHFRLS 230

Query: 226 PAELRKEFTKRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGGYTK 285
           PAELR EFT+RNADAVFAFQLRNPVHNGHALLMTDTR+RLLEMGYKNPVLLLHPLGGYTK
Sbjct: 231 PAELRAEFTRRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPVLLLHPLGGYTK 290

Query: 286 ADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYI 345
           ADDVPL WRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYI
Sbjct: 291 ADDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYI 350

Query: 346 VGRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPTR 405
           VGRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPF+VAAYDKTQGKMAFFDP+R
Sbjct: 351 VGRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSR 410

Query: 406 PQDFLFISGTKM 417
           PQDFLFISGTK+
Sbjct: 411 PQDFLFISGTKV 422


>Glyma13g06940.1 
          Length = 488

 Score =  572 bits (1475), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 285/423 (67%), Positives = 325/423 (76%), Gaps = 22/423 (5%)

Query: 46  IRAGLIEPDGGKLVELFVDKSQKDVRRKEAISLPKITLTKIDRQWVHVLSXGWASPLSGF 105
           I++ LIEPDGG LV+L V + ++  +   A SLPK+ LT+ID +WVHV+  GWASPL GF
Sbjct: 72  IKSSLIEPDGGALVDLVVPEGERGAKITLAESLPKVQLTRIDLEWVHVVGEGWASPLKGF 131

Query: 106 MRESRVPPKLFILMPSVSKTGRLLT------------CRCRLCSPSTICRSNGSASPKGS 153
           MRE      L      V K G ++              + R+ S S +    G   P G 
Sbjct: 132 MREDEYLQSLHFNSLRV-KDGSVVNMSLPIVLAIDDETKERIGSSSHV----GLLGPDGD 186

Query: 154 LSSILTIRRLQF*TIYKHPKEERIARTWGTTAPGLPYVEETIKKSGNWLIGGDLEVIEPI 213
             +IL  R ++   IYKH KEERIARTWGTTAPGLPYVEE I  +GNWLIGGDLEV++PI
Sbjct: 187 CVAIL--RSIE---IYKHNKEERIARTWGTTAPGLPYVEEVITPAGNWLIGGDLEVLKPI 241

Query: 214 KYHDGLDRFRLSPAELRKEFTKRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNP 273
           KY+DGLD +RLSP +LR+EF KR ADAVFAFQLRNPVHNGHALLM DTRKRLLEMGYKNP
Sbjct: 242 KYNDGLDNYRLSPKQLREEFDKRQADAVFAFQLRNPVHNGHALLMNDTRKRLLEMGYKNP 301

Query: 274 VLLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHA 333
           +LLLHPLGG+ KADDVPL  RM+QH KVLEDGVLDPETT+V+IFPSPMHYAGPTEVQWHA
Sbjct: 302 ILLLHPLGGFVKADDVPLDVRMEQHSKVLEDGVLDPETTIVAIFPSPMHYAGPTEVQWHA 361

Query: 334 KARINAGANFYIVGRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDK 393
           KARINAGANFYIVGRDPAGM HP EKRDLYD DHGKKVLSMAPGLE+LNILPF+VAAYD 
Sbjct: 362 KARINAGANFYIVGRDPAGMGHPTEKRDLYDPDHGKKVLSMAPGLEKLNILPFRVAAYDT 421

Query: 394 TQGKMAFFDPTRPQDFLFISGTKMRTLAKNKENPPDGFMCPGGWNVLVEYYDSLAPADNG 453
              KMAFFDPTR +DFLFISGTKMR  AK+ ENPP+GFMCP GW VLV+YY+SL   +  
Sbjct: 422 KVNKMAFFDPTRAKDFLFISGTKMRAFAKSGENPPEGFMCPSGWKVLVKYYESLQAEEPS 481

Query: 454 KVP 456
           + P
Sbjct: 482 QQP 484


>Glyma13g06940.2 
          Length = 357

 Score =  509 bits (1310), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 242/311 (77%), Positives = 266/311 (85%), Gaps = 5/311 (1%)

Query: 146 GSASPKGSLSSILTIRRLQF*TIYKHPKEERIARTWGTTAPGLPYVEETIKKSGNWLIGG 205
           G   P G   +IL  R ++   IYKH KEERIARTWGTTAPGLPYVEE I  +GNWLIGG
Sbjct: 48  GLLGPDGDCVAIL--RSIE---IYKHNKEERIARTWGTTAPGLPYVEEVITPAGNWLIGG 102

Query: 206 DLEVIEPIKYHDGLDRFRLSPAELRKEFTKRNADAVFAFQLRNPVHNGHALLMTDTRKRL 265
           DLEV++PIKY+DGLD +RLSP +LR+EF KR ADAVFAFQLRNPVHNGHALLM DTRKRL
Sbjct: 103 DLEVLKPIKYNDGLDNYRLSPKQLREEFDKRQADAVFAFQLRNPVHNGHALLMNDTRKRL 162

Query: 266 LEMGYKNPVLLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAG 325
           LEMGYKNP+LLLHPLGG+ KADDVPL  RM+QH KVLEDGVLDPETT+V+IFPSPMHYAG
Sbjct: 163 LEMGYKNPILLLHPLGGFVKADDVPLDVRMEQHSKVLEDGVLDPETTIVAIFPSPMHYAG 222

Query: 326 PTEVQWHAKARINAGANFYIVGRDPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILP 385
           PTEVQWHAKARINAGANFYIVGRDPAGM HP EKRDLYD DHGKKVLSMAPGLE+LNILP
Sbjct: 223 PTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDPDHGKKVLSMAPGLEKLNILP 282

Query: 386 FKVAAYDKTQGKMAFFDPTRPQDFLFISGTKMRTLAKNKENPPDGFMCPGGWNVLVEYYD 445
           F+VAAYD    KMAFFDPTR +DFLFISGTKMR  AK+ ENPP+GFMCP GW VLV+YY+
Sbjct: 283 FRVAAYDTKVNKMAFFDPTRAKDFLFISGTKMRAFAKSGENPPEGFMCPSGWKVLVKYYE 342

Query: 446 SLAPADNGKVP 456
           SL   +  + P
Sbjct: 343 SLQAEEPSQQP 353


>Glyma19g05020.1 
          Length = 552

 Score =  468 bits (1204), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 218/288 (75%), Positives = 243/288 (84%)

Query: 169 YKHPKEERIARTWGTTAPGLPYVEETIKKSGNWLIGGDLEVIEPIKYHDGLDRFRLSPAE 228
           YK      I    GTTAPGLPYVEE I  +GNWLIGGDLEV++PIKY+DGLD +RLSP +
Sbjct: 261 YKRGMPMEIETPKGTTAPGLPYVEEVITPAGNWLIGGDLEVLKPIKYNDGLDNYRLSPKQ 320

Query: 229 LRKEFTKRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGGYTKADD 288
           LR+EF KR ADAVFAFQLRNPVHNG ALLM DTRKRLLE+G+KNP+LLLHPLGG+ KADD
Sbjct: 321 LREEFDKRQADAVFAFQLRNPVHNGRALLMNDTRKRLLEIGFKNPILLLHPLGGFVKADD 380

Query: 289 VPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGR 348
           VPL  RM+QH KVLEDGVLDPETT+V+IFPSPMHY GPTEVQWHAKARI+AGANFYIVGR
Sbjct: 381 VPLDVRMEQHSKVLEDGVLDPETTIVAIFPSPMHYVGPTEVQWHAKARIDAGANFYIVGR 440

Query: 349 DPAGMSHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPTRPQD 408
           DP GM HP EKRDLYD DHGKKVL+MAPGLE+LNILPF+VAAYD    KMAFFDPTR +D
Sbjct: 441 DPTGMGHPTEKRDLYDPDHGKKVLNMAPGLEKLNILPFRVAAYDTKLNKMAFFDPTRAKD 500

Query: 409 FLFISGTKMRTLAKNKENPPDGFMCPGGWNVLVEYYDSLAPADNGKVP 456
           FLFI GTKMR  AK+ ENPP GFMCP GW VLV+YY+SL   ++ + P
Sbjct: 501 FLFIYGTKMRAFAKSGENPPKGFMCPSGWKVLVKYYESLQAEESSQQP 548



 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 52/73 (71%)

Query: 36  PKLHSKRLARIRAGLIEPDGGKLVELFVDKSQKDVRRKEAISLPKITLTKIDRQWVHVLS 95
           P++   R   I++ LIEPDGG LV+L V + ++  +  EA SLPK+ LT+ID +WVHV+ 
Sbjct: 62  PRVQQHRGTMIKSSLIEPDGGALVDLMVSEGERGAKITEAESLPKVQLTRIDLEWVHVVG 121

Query: 96  XGWASPLSGFMRE 108
            GWASPL GFMRE
Sbjct: 122 EGWASPLRGFMRE 134