Jatropha Genome Database

JcCB0035141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0035141.10 - phase: 0 /partial
         (561 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02830.1                                                       371   e-102

>Glyma04g02830.1 
          Length = 836

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/405 (55%), Positives = 270/405 (66%), Gaps = 22/405 (5%)

Query: 155 EINSHFHKAEIEGEETDQPKRSMKRNASEQLETEGKRFVFGSRKIGNPAFIAVQSKFEEL 214
           E+NS   K EI+GE   Q K+SMKR AS+QLE EGK+ V GSRK+ NPAFIA QSKFEEL
Sbjct: 441 ELNSFNQKPEIDGE---QGKQSMKRFASDQLEAEGKKPVNGSRKVSNPAFIAAQSKFEEL 497

Query: 215 SSTANSNKSFSLSYQDGAVESNMDTISSGADTVVRTKELNLVGNSVPNNLRGQCGDSECG 274
           SS  NS           AVES  DT S G DT  R+KE        P     +   SECG
Sbjct: 498 SSIENS-----------AVESQGDTSSVGNDTAYRSKEFAFEN---PAAYLSRFAGSECG 543

Query: 275 TELSVTSTLDSPDIFEVGATEYEHEAKSSEKETYNRNSTIDVVVEAKDVPTD--PVSNPF 332
           TELS++STLDSPDI E GA E E +AK   +   N  +TI+   EA D  +   P SN  
Sbjct: 544 TELSISSTLDSPDISEPGAMENERDAKDLMEGIGNLENTINHDDEANDNVSRVIPASNLA 603

Query: 333 DYLMVQPEKLDTVKDESVDSVVAADSLHVELKPERSASDVQRELYSETGGPAYRSSPEAS 392
             ++ + E +D +      SVVA DS    +K E++A D+QREL  E+     RSSPEAS
Sbjct: 604 TSVLDKSEIVDDISANLGHSVVAVDSEEPAIKTEKNAPDLQREL-PESVLQDLRSSPEAS 662

Query: 393 PRSHMTVPESQGTPSSQVSVKPKRNRSDKSASSQKRKSLSAGKRSPSNPNHDSGARSSME 452
           PRSH+TVPESQGTPSS+VSVKPK +  +K+ S  KR+SLS   +SP+NPNHDSG++ S E
Sbjct: 663 PRSHLTVPESQGTPSSEVSVKPKDSTINKTRSGNKRRSLSLSNKSPTNPNHDSGSKDSRE 722

Query: 453 QLPKDQKNGKRRNSFGSSRPDNTDQEARD-XXXXXXLPHFMQATESARAKIQANNSPRSS 511
           QLPKDQ+NGKRRNSFGS +PDN DQE+RD       LPHFMQATESARAK+ ANNSPRSS
Sbjct: 723 QLPKDQQNGKRRNSFGSVKPDNIDQESRDNSTNNNSLPHFMQATESARAKVNANNSPRSS 782

Query: 512 PDVHDREY-IKKRQSLPGSNGRQSSPSIQRSLSQAQPGTKGNGSH 555
           PDVH+ +  +KKR SLPG+ GRQ SP IQRS S+AQ   KGN  H
Sbjct: 783 PDVHEGDIEVKKRHSLPGATGRQVSPRIQRSTSKAQQSAKGNNVH 827