Jatropha Genome Database

JcCB0035061.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0035061.20 + phase: 0 
         (285 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g12610.1                                                       349   2e-96
Glyma03g24260.1                                                       343   2e-94

>Glyma07g12610.1 
          Length = 287

 Score =  349 bits (896), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 171/244 (70%), Positives = 198/244 (81%), Gaps = 5/244 (2%)

Query: 39  RSTDLVAMEYADLNLSHIISGELGHVRVRQHVNPLSSSFSVPARIPDWKEVFRDPTLPLM 98
           RS+ LVA+EYADLNLSH +  +LGHVR+RQHVNPLSSS SVPA++P+W   F DPTLPLM
Sbjct: 43  RSSQLVALEYADLNLSHNL--DLGHVRIRQHVNPLSSSLSVPAQVPEWNHAFADPTLPLM 100

Query: 99  VDIGSGSGRFLIWLAKRNRNIGNYLGIEIRQKMQLVNRAEHWIKELALDNLHFLFANATV 158
           VDIG GSGRFL+WLAKR     N+LG+EIRQK  +V RAE W K+LALDN+HFLFANAT+
Sbjct: 101 VDIGCGSGRFLMWLAKRTPKERNFLGLEIRQK--IVKRAESWAKDLALDNVHFLFANATI 158

Query: 159 SFRQLVVGYPGPLMFVSILCPDPXXXXXXXXXXVVQKPLVDSIINNLAPGGKVFVQSDVL 218
           SF+QLV  YPGPL  VSILCPDP          V+QKPLVD+I++NL PGG+VF QSDV 
Sbjct: 159 SFKQLVESYPGPLALVSILCPDPHFKKRHHKRRVLQKPLVDAIVDNLMPGGQVFTQSDVF 218

Query: 219 EVALDMRNQFDAESDMLRHIDETDLSMLCDKDGWLLNNPMGIRTEREIHAEFEGAKIYRR 278
           E+ALDMRNQFD E + L+HI+  + SMLCD +GWLL NPMGIRTEREIHAE EGAKIYRR
Sbjct: 219 EMALDMRNQFD-EVETLKHIEVLNPSMLCDSEGWLLGNPMGIRTEREIHAEHEGAKIYRR 277

Query: 279 LYQK 282
           LYQK
Sbjct: 278 LYQK 281


>Glyma03g24260.1 
          Length = 288

 Score =  343 bits (879), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 171/281 (60%), Positives = 212/281 (75%), Gaps = 6/281 (2%)

Query: 4   LSQPVTPYPKAWLWTCGGHKYDENRINACIGAKEL-RSTDLVAMEYADLNLSHIISGELG 62
           L+ P TP   ++   C      +  +      + L +S+ LVA+EYADLNLS+ +  +LG
Sbjct: 12  LATPPTPSSLSFSSNCHVSSSAQATLQQQHEQQPLPQSSQLVALEYADLNLSYNL--DLG 69

Query: 63  HVRVRQHVNPLSSSFSVPARIPDWKEVFRDPTLPLMVDIGSGSGRFLIWLAKRNRNIGNY 122
           HVR+RQHVNPLSSSFSVPA++PDW   F DPTLPLMVDIG GSGRFL+WLAKR     N+
Sbjct: 70  HVRIRQHVNPLSSSFSVPAQVPDWNHAFADPTLPLMVDIGCGSGRFLMWLAKRTPKERNF 129

Query: 123 LGIEIRQKMQLVNRAEHWIKELALDNLHFLFANATVSFRQLVVGYPGPLMFVSILCPDPX 182
           LG+EIR++  +V RAE W K+LALDN+ FLFANAT+SF+QLV  YPGPL+ VS+LCPDP 
Sbjct: 130 LGLEIRER--IVKRAESWAKDLALDNILFLFANATISFKQLVESYPGPLVLVSVLCPDPH 187

Query: 183 XXXXXXXXXVVQKPLVDSIINNLAPGGKVFVQSDVLEVALDMRNQFDAESDMLRHIDETD 242
                    V+QKPLV +I++NL PGG+VF+QSDV+E+ALDMRNQFD E   L+HI+  D
Sbjct: 188 FKKKHHKRRVLQKPLVGAIVDNLMPGGQVFIQSDVIEMALDMRNQFD-EVKTLKHIEVLD 246

Query: 243 LSMLCDKDGWLLNNPMGIRTEREIHAEFEGAKIYRRLYQKR 283
            +MLCD +GWLL+NPM IRTEREIHAE EGAKIYRRLYQK+
Sbjct: 247 PAMLCDSEGWLLSNPMAIRTEREIHAEHEGAKIYRRLYQKQ 287