Jatropha Genome Database

JcCB0033761.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0033761.20 + phase: 0 /TE/partial
         (66 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g20680.1                                                        64   4e-11
Glyma04g32860.1                                                        61   2e-10
Glyma19g09060.1                                                        61   3e-10
Glyma0023s00200.1                                                      54   3e-08
Glyma18g37160.1                                                        52   1e-07
Glyma18g33480.1                                                        51   3e-07

>Glyma01g20680.1 
          Length = 1337

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 41/60 (68%)

Query: 2    TLTYEEEPVQILAKETKELRNKKIALVKVLWRNHKTEEATWESEDTMRQQYPQLFTTGKL 61
             LTYE +P++I  +  K+LR K+I LVKV+W +  +E+ATWE E  MR  YP LF T +L
Sbjct: 1223 NLTYETQPLRIGDRMVKQLRGKEIPLVKVVWGSASSEDATWELEGQMRDAYPTLFDTEQL 1282


>Glyma04g32860.1 
          Length = 1557

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 37/57 (64%)

Query: 2    TLTYEEEPVQILAKETKELRNKKIALVKVLWRNHKTEEATWESEDTMRQQYPQLFTT 58
             LTYE +P++I     K+LR K+I LVKV+W +   E+ATWE E  MR  YP LF T
Sbjct: 1401 NLTYETQPLRIDDHMVKQLRGKEIPLVKVVWGSASGEDATWELEGQMRDAYPTLFDT 1457


>Glyma19g09060.1 
          Length = 165

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 37/60 (61%)

Query: 2   TLTYEEEPVQILAKETKELRNKKIALVKVLWRNHKTEEATWESEDTMRQQYPQLFTTGKL 61
            LTYE  P++I  + TK LR K+  LVKV+W     E+ATWE E  MR  YP LF +GK 
Sbjct: 106 NLTYETLPLRIEDRRTKHLRRKENPLVKVIWGGTSGEDATWELESQMRVAYPSLFESGKF 165


>Glyma0023s00200.1 
          Length = 1657

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 2    TLTYEEEPVQILAKETKELRNKKIALVKVLWRNHKTEEATWESEDTMRQQYPQLF 56
             LTY  +P +I  + TK LR K+IALVKV W   +  ++TW+ ED MR+ YP LF
Sbjct: 1378 NLTYRAQPQKITDRRTKSLRGKEIALVKVQWGTDEG-DSTWDLEDRMRELYPSLF 1431


>Glyma18g37160.1 
          Length = 1398

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 2    TLTYEEEPVQILAKETKELRNKKIALVKVLWRNHKTEEATWESEDTMRQQYPQ 54
             LTY+ +P +I  +  K LR K+IALVKV W N +  ++TWE ED MR+ YP+
Sbjct: 1043 NLTYKAQPQKITDRRMKSLRGKEIALVKVQWGNDEG-DSTWELEDRMRELYPK 1094


>Glyma18g33480.1 
          Length = 1718

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 2    TLTYEEEPVQILAKETKELRNKKIALVKVLWRNHKTEEATWESEDTMRQQYP 53
             LTY  +P +I  + TK LR K+IALVKV W   +  ++TWE ED MR+ YP
Sbjct: 1376 NLTYRAQPQEITDRRTKSLRGKEIALVKVQWGTDEG-DSTWELEDRMRELYP 1426