Jatropha Genome Database

JcCB0033401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0033401.10 - phase: 0 
         (753 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g10320.1                                                       277   3e-74
Glyma15g22480.1                                                       245   2e-64

>Glyma09g10320.1 
          Length = 615

 Score =  277 bits (709), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 168/399 (42%), Positives = 231/399 (57%), Gaps = 36/399 (9%)

Query: 2   EGGEDDSTTRIYVGGLGESVTSDDLCTIFSKIGGDIKAVDIIRTKGRSFAYIDFSPSSHN 61
           E  E  S  RI+VGGL E+V+++DL ++F+ +G  +++V  IRTKGRSFAY+DF  S   
Sbjct: 4   EAEETKSAARIFVGGLAEAVSAEDLRSLFASLGS-VQSVQTIRTKGRSFAYLDFL-SDPK 61

Query: 62  SLSKLFSTYNGCVWKGKRLRLEKAKEHYLDRLKQEWAEDAQLXXXXXXXXXXXXXXKNME 121
           SLSKLFS YNGC+WKG RLRLEKAKE YL RLK+EW E   L                 E
Sbjct: 62  SLSKLFSKYNGCLWKGGRLRLEKAKEDYLVRLKREW-EQGTLDDATQKPPTAASE----E 116

Query: 122 SFKKPMKELSSEKKQLRIFFPRLQKLKSLPFSGTGKHRYSFRRVEVPPLPTHFCDCEEHS 181
                 +   S  K L IFFPRL+K+KS+PFSGTGKH+YSF+ ++VPPLP HFCDCEEH 
Sbjct: 117 EMPNTAQSSKSNTKHLNIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPPLPVHFCDCEEHC 176

Query: 182 GSVYTTEKKAIPVLEEQGGGMSKEELDMMNSVMNKLFEIENVSATAHSDIVLTKEQESSI 241
                  +K       + GG++ EE+ +MN+VMNKLFE E VS   +       E++ S 
Sbjct: 177 KPFVPEREKLSIDRTAESGGINDEEISIMNAVMNKLFEKEQVSNAKN-----LGEEKDSF 231

Query: 242 KVSDDFQSEENEGYSTEDDDNLIINVVQRRKETAFT----------DQESKLNKGQASKD 291
           +  D   S+E E  +T++DD LIINV  ++ +T+ T          +QES  NK + +K+
Sbjct: 232 ESPDALHSDECEDSATDEDD-LIINVETKKNKTSLTEDKELQRILENQESWFNKRKIAKE 290

Query: 292 GPTQDVLKSQTRRHD--DGNRKGS------VSAVSEGNGSFQSNLNEPGNILEAKLIEPE 343
            P +  L  Q R +   D N+K        VS       + Q+  +E G+       +P 
Sbjct: 291 EPNKSTLLVQKRSNSNPDKNKKRKSLPKLEVSTTPGSKSNMQTLPDEVGSD-----AQPT 345

Query: 344 SIAKQSDPKLSWSQKSSWRELIGNKSSSAMNISDILPGI 382
            +      K+SWSQKSSWREL+G+K +++ + S ILP +
Sbjct: 346 ELEDDFGEKVSWSQKSSWRELLGDKGNTSFSASLILPKL 384



 Score = 93.6 bits (231), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 96/202 (47%), Gaps = 43/202 (21%)

Query: 563 LEGPAETQPT-----------KQDSASNETGRGSAWLNKASWTQLVAXXXXXXXXIAQIL 611
           +E  AE QPT           K + A N+TGRG++WL K SWTQ+V         I+ IL
Sbjct: 425 IEEHAEAQPTNKQVIEDVANNKHNVAPNKTGRGASWLQKQSWTQMVGQNNNSFS-ISNIL 483

Query: 612 PGLNFEKQEPVKPDGVI-IADSTSCKHSDITEKRKSHTAVDGEMALGFERDRDVKSTPEL 670
           PG+ F   EP+  + ++  A S  CKH+ +  K   +   DG     F     +   P  
Sbjct: 484 PGITF--PEPMAKEAIMEPAISNDCKHNGVA-KDTVNVVCDG-----FNSRETI---PGK 532

Query: 671 SQHMVVGNNDVPAPTDGKYGSATKQAAPPTENIYRSAKKQFDLRTNVGGVLIGESCSFMR 730
           SQH     ND+ + + G+    T      TEN+                  IGE+CSFMR
Sbjct: 533 SQHTSA--NDIASASVGEEKGETSPREKSTENVE-----------------IGETCSFMR 573

Query: 731 TDASLKEWENIKAALSGSRKRK 752
           + ASLKEW   KAA+SGS KRK
Sbjct: 574 SAASLKEWAKAKAAMSGSLKRK 595


>Glyma15g22480.1 
          Length = 593

 Score =  245 bits (625), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/411 (37%), Positives = 216/411 (52%), Gaps = 74/411 (18%)

Query: 2   EGGEDDSTTRIYVGGLGESVTSDDLCTIFSKIGGDIKAVDIIRTKGRSFAYIDFSPSSHN 61
           E  E  S  RI+VGGL  +V+++DL ++F+ +G  +++V  IRTKGRSFAY+DF  S   
Sbjct: 4   EAEETKSAVRIFVGGLAGAVSAEDLRSLFASLGS-VQSVQTIRTKGRSFAYLDFL-SDPK 61

Query: 62  SLSKLFSTYNGCVWKGKRLRLEKAKEHYLDRLKQEWAEDAQLXXXXXXXXXXXXXXKNME 121
           SLSKLFS YNGC+WKG RLRLEKAKE YL RLK+EW + A                   E
Sbjct: 62  SLSKLFSKYNGCLWKGGRLRLEKAKEDYLVRLKREWEQGALDDATQKPPAAAIE-----E 116

Query: 122 SFKKPMKELSSEKKQLRIFFPRLQKLKSLPFSGTGKHRYSFRRVEVPPLPTHFCDCEEHS 181
                     S  K L IFFPRL+K+KS+PFSGTGKH+YSF+ ++VP LP HFCDCEEH 
Sbjct: 117 EIPSTAHSSESNTKHLNIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPLLPVHFCDCEEHC 176

Query: 182 GSVYTTEKKAIPV-LEEQGGGMSKEELDMMNSVMNKLFEIENVSATAHSDIVLTKEQESS 240
            S +  E++ + +      G M+ EE+ +MN+VMNKL   + VS        L +E++S+
Sbjct: 177 -SPFVPEREKLSIDRAADSGAMNDEEISIMNAVMNKLLGKQKVSNAKK----LGEEKDSA 231

Query: 241 IKVSDDFQSEENEGYSTEDDDNLIINVVQRRKETAFTD---------------------- 278
                             D+D+LIINV  ++ +TA T                       
Sbjct: 232 T-----------------DEDDLIINVETKKNKTALTGDEELQRILENQFNKLRVGILFY 274

Query: 279 -------QESKLNKGQASKDGPTQDVLKSQTRRHDDGNRKGSVSAVSEGNGSFQSNLNEP 331
                  QES LNK + +K+ P + +   Q R       K ++  + +  GS        
Sbjct: 275 LIVLFNLQESWLNKTKIAKEEPNKSMPPVQKRMSTTPGSKSNMQMLPDEVGSGA------ 328

Query: 332 GNILEAKLIEPESIAKQSDPKLSWSQKSSWRELIGNKSSSAMNISDILPGI 382
                    +P  +      K+SWSQKSSWREL+G+K +++ + S ILP +
Sbjct: 329 ---------QPTELEDDFGEKVSWSQKSSWRELLGDKGNTSFSASLILPKL 370



 Score = 90.1 bits (222), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 89/178 (50%), Gaps = 31/178 (17%)

Query: 577 ASNETGRGSAWLNKASWTQLVAXXXXXXXXIAQILPGLNFEKQEPVKPDGVI-IADSTSC 635
           A N+TGRGS+WL K SWTQ+V+        I+ ILPG+ F   EP+  + ++  A S  C
Sbjct: 438 APNKTGRGSSWLQKQSWTQMVSQNNNSFS-ISNILPGITF--PEPMATEPIVEPAISNDC 494

Query: 636 KHSDITEKRKSHTAVDGEMALGFERDRDVKSTPELSQHMVVGNNDVPAPTDGKYGSATKQ 695
           KH+ + +   +    DG     F     +   P  SQH   G +D+ + +  +    T  
Sbjct: 495 KHNGVAKDTVNEVVSDG-----FSSRETI---PVKSQH--TGADDIASASVVEEKVETSP 544

Query: 696 AAPPTENIYRSAKKQFDLRTNVGGVLIGESCSFMRTDASLKEWENIKAALSGSRKRKR 753
               +EN+                  IGE+CSFMR+ ASLKEW   KAA+SGS KRKR
Sbjct: 545 REKSSENVE-----------------IGETCSFMRSAASLKEWAKAKAAMSGSLKRKR 585