Jatropha Genome Database

JcCB0032921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0032921.10 - phase: 0 /pseudo/partial
         (296 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g32850.1                                                       290   1e-78
Glyma10g32850.2                                                       290   1e-78
Glyma20g34790.1                                                       288   6e-78
Glyma14g27630.1                                                       246   2e-65
Glyma09g05600.1                                                        55   9e-08
Glyma15g16870.2                                                        55   1e-07
Glyma15g16870.1                                                        55   1e-07
Glyma09g05600.2                                                        55   1e-07

>Glyma10g32850.1 
          Length = 464

 Score =  290 bits (743), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 135/163 (82%), Positives = 155/163 (95%)

Query: 132 AVEKHVLESGSIDTVGTVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSA 191
           AVE+HVL+SGSIDTVGTVGIL+LHPGAINSIPSKSHLEIDTRDIDEERRN V+EKI QSA
Sbjct: 300 AVERHVLDSGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEERRNKVVEKIHQSA 359

Query: 192 ITIAKNRGVKLSEFNIINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMAR 251
           I I K RGVKLS+F +INQDPPA+SD++VI+A+E A+KELNLT KLMISRAYHDSLFMAR
Sbjct: 360 IKITKTRGVKLSDFRVINQDPPAISDEAVIKAVETATKELNLTSKLMISRAYHDSLFMAR 419

Query: 252 ISPMGMLFIPCYRGYSHKPEEYASIEDIANGVKVLALTLSKLS 294
           +SPMGM+FIPCY+GYSHKPEE+A+IED++NGVKVLALTL+KLS
Sbjct: 420 LSPMGMIFIPCYKGYSHKPEEFATIEDMSNGVKVLALTLAKLS 462


>Glyma10g32850.2 
          Length = 371

 Score =  290 bits (742), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 135/163 (82%), Positives = 155/163 (95%)

Query: 132 AVEKHVLESGSIDTVGTVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSA 191
           AVE+HVL+SGSIDTVGTVGIL+LHPGAINSIPSKSHLEIDTRDIDEERRN V+EKI QSA
Sbjct: 207 AVERHVLDSGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEERRNKVVEKIHQSA 266

Query: 192 ITIAKNRGVKLSEFNIINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMAR 251
           I I K RGVKLS+F +INQDPPA+SD++VI+A+E A+KELNLT KLMISRAYHDSLFMAR
Sbjct: 267 IKITKTRGVKLSDFRVINQDPPAISDEAVIKAVETATKELNLTSKLMISRAYHDSLFMAR 326

Query: 252 ISPMGMLFIPCYRGYSHKPEEYASIEDIANGVKVLALTLSKLS 294
           +SPMGM+FIPCY+GYSHKPEE+A+IED++NGVKVLALTL+KLS
Sbjct: 327 LSPMGMIFIPCYKGYSHKPEEFATIEDMSNGVKVLALTLAKLS 369


>Glyma20g34790.1 
          Length = 371

 Score =  288 bits (736), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 133/163 (81%), Positives = 155/163 (95%)

Query: 132 AVEKHVLESGSIDTVGTVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSA 191
           AVE+HVL+SGSIDTVGTVGIL+LHPGAINSIPSKSHLEIDTRDIDEERRN V+EKI QSA
Sbjct: 207 AVERHVLDSGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEERRNKVVEKIHQSA 266

Query: 192 ITIAKNRGVKLSEFNIINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMAR 251
           I I K RGVKLS+F++INQDPPALSD+++I+A+E A+KELNLT KLMISRAYHDSLFMAR
Sbjct: 267 IKITKTRGVKLSDFHVINQDPPALSDEAIIKAVETATKELNLTSKLMISRAYHDSLFMAR 326

Query: 252 ISPMGMLFIPCYRGYSHKPEEYASIEDIANGVKVLALTLSKLS 294
           +SPMGM+FIPCY+GYSHKPEE+A+I+D++NGVKVL LTL+KLS
Sbjct: 327 LSPMGMIFIPCYKGYSHKPEEFATIQDMSNGVKVLTLTLAKLS 369


>Glyma14g27630.1 
          Length = 186

 Score =  246 bits (629), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 116/163 (71%), Positives = 143/163 (87%)

Query: 132 AVEKHVLESGSIDTVGTVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSA 191
           A+E+HVL+ GSID VGT GIL+LH GAIN+IP+K HLEIDTRDIDEERRN V++KI QSA
Sbjct: 22  AIERHVLDCGSIDNVGTAGILELHLGAINNIPNKCHLEIDTRDIDEERRNKVVDKIHQSA 81

Query: 192 ITIAKNRGVKLSEFNIINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMAR 251
           I I K RGVK S F +INQDP +LS+++V++A+E A+KELNLT KLMISRAYHDSL MAR
Sbjct: 82  IKITKTRGVKFSHFRVINQDPLSLSNEAVMKAVETATKELNLTSKLMISRAYHDSLLMAR 141

Query: 252 ISPMGMLFIPCYRGYSHKPEEYASIEDIANGVKVLALTLSKLS 294
           +SPMGM+FIP Y+GY+HKP+E+A+IED++NGV V ALTL+KLS
Sbjct: 142 LSPMGMIFIPWYKGYNHKPKEFATIEDMSNGVNVSALTLAKLS 184


>Glyma09g05600.1 
          Length = 483

 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 138 LESGSIDTVGTVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSAITIAKN 197
           ++S S   V TVG +   P A N IP +    +D R ID+  R  VI  + +    I   
Sbjct: 320 VKSLSTSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDK 379

Query: 198 RGVK-LSEFN------IINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMA 250
           R V  + E        I + D  +    +   A++    ++      ++S A HD++ ++
Sbjct: 380 RSVSCIIEHKHDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAIS 439

Query: 251 RISPMGMLFIPCYRGYSHKPEEYASIEDI 279
            ++ +GMLF+ C  G SH P+E+    D+
Sbjct: 440 HLTKVGMLFVRCRGGISHSPQEHVLDNDV 468


>Glyma15g16870.2 
          Length = 403

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)

Query: 148 TVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSAITIAKNRGVK-LSEFN 206
           TVG +   P A N IP +    +D R ID+  R  VI  + +    I   R V  + E  
Sbjct: 250 TVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCIIEHK 309

Query: 207 ------IINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMARISPMGMLFI 260
                 I + D  +    +   A++    ++      ++S A HD++ ++ ++ +GMLF+
Sbjct: 310 HDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAISHLTKVGMLFV 369

Query: 261 PCYRGYSHKPEEYASIEDI-ANGVKVLAL 288
            C  G SH P+E+    D+ A G+  L+ 
Sbjct: 370 RCRGGISHSPQEHVLDNDVWAAGLATLSF 398


>Glyma15g16870.1 
          Length = 483

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)

Query: 148 TVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSAITIAKNRGVK-LSEFN 206
           TVG +   P A N IP +    +D R ID+  R  VI  + +    I   R V  + E  
Sbjct: 330 TVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCIIEHK 389

Query: 207 ------IINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMARISPMGMLFI 260
                 I + D  +    +   A++    ++      ++S A HD++ ++ ++ +GMLF+
Sbjct: 390 HDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAISHLTKVGMLFV 449

Query: 261 PCYRGYSHKPEEYASIEDI-ANGVKVLAL 288
            C  G SH P+E+    D+ A G+  L+ 
Sbjct: 450 RCRGGISHSPQEHVLDNDVWAAGLATLSF 478


>Glyma09g05600.2 
          Length = 403

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 138 LESGSIDTVGTVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSAITIAKN 197
           ++S S   V TVG +   P A N IP +    +D R ID+  R  VI  + +    I   
Sbjct: 240 VKSLSTSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDK 299

Query: 198 RGVK-LSEFN------IINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMA 250
           R V  + E        I + D  +    +   A++    ++      ++S A HD++ ++
Sbjct: 300 RSVSCIIEHKHDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAIS 359

Query: 251 RISPMGMLFIPCYRGYSHKPEEYASIEDI 279
            ++ +GMLF+ C  G SH P+E+    D+
Sbjct: 360 HLTKVGMLFVRCRGGISHSPQEHVLDNDV 388