Jatropha Genome Database

JcCB0031431.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0031431.20 - phase: 0 
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g36630.1                                                       104   2e-23
Glyma18g00550.1                                                       102   9e-23
Glyma05g28470.1                                                        96   1e-20
Glyma03g39580.1                                                        88   2e-18
Glyma19g42200.1                                                        88   2e-18
Glyma10g29260.1                                                        86   7e-18
Glyma20g38020.1                                                        84   2e-17
Glyma08g11470.1                                                        83   7e-17
Glyma17g02940.1                                                        80   4e-16
Glyma07g37690.1                                                        80   5e-16
Glyma19g39730.1                                                        78   2e-15
Glyma03g37110.1                                                        78   2e-15
Glyma07g31790.1                                                        62   1e-10
Glyma13g24680.1                                                        62   1e-10
Glyma15g08170.1                                                        60   6e-10
Glyma13g31170.1                                                        56   7e-09
Glyma01g39370.1                                                        54   4e-08
Glyma11g05900.1                                                        51   2e-07

>Glyma11g36630.1 
          Length = 122

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 16/108 (14%)

Query: 9   LALIFLHTHFAICNGVSVSGLNSLENTEIDAVMRRVDW--------LEEAEMESEISRRV 60
           LAL+  +T    CNG+    LN     E+D + +RV          L E EM+SE +RRV
Sbjct: 14  LALVLFYT----CNGLPFVDLNF---HEVDVMTKRVCTKSIGECLSLTEPEMDSETNRRV 66

Query: 61  LLMQK-YISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEVITRC 107
           L MQK YISY+TLKRDMVPC + GASYY+CHA  ANPY+RGCEVIT C
Sbjct: 67  LAMQKKYISYDTLKRDMVPCDRAGASYYNCHAIRANPYNRGCEVITAC 114


>Glyma18g00550.1 
          Length = 122

 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 58/108 (53%), Positives = 68/108 (62%), Gaps = 16/108 (14%)

Query: 9   LALIFLHTHFAICNGVSVSGLNSLENTEIDAVMRRVDW--------LEEAEMESEISRRV 60
           L L   HT    C G+    LN     E+D + +RV          L E EM+SE +RRV
Sbjct: 14  LTLFLFHT----CTGLPFVDLNF---HEVDVMTKRVCTKSIGECLSLTEPEMDSETNRRV 66

Query: 61  LLMQK-YISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEVITRC 107
           L MQK YISY+TLKRDMVPC + GASYY+CHA  ANPY+RGCEVIT C
Sbjct: 67  LAMQKKYISYDTLKRDMVPCDRAGASYYNCHAIRANPYNRGCEVITAC 114


>Glyma05g28470.1 
          Length = 128

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 65/97 (67%), Gaps = 12/97 (12%)

Query: 20  ICNGVSVSGLNSLENTEIDAVMRRV------DWLEEAEMESEISRRVL---LMQKYISYE 70
           ICNG+ V  LN    +E   + +RV      + L E EM+SE +RRVL      KYISYE
Sbjct: 26  ICNGLLVVDLNL---SETAVMTKRVCTKSIGECLAEPEMDSESNRRVLEGVQHIKYISYE 82

Query: 71  TLKRDMVPCAKPGASYYDCHAGEANPYSRGCEVITRC 107
           TLKRDMVPC + GASYY+CHA  ANPY+RGCEVIT C
Sbjct: 83  TLKRDMVPCDRAGASYYNCHARPANPYNRGCEVITGC 119


>Glyma03g39580.1 
          Length = 174

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 48  EEAEMESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITR 106
           EE +++SEISRR+L   KYISY  L+R+ VPC++ GASYY+C  G +ANPYSRGC  ITR
Sbjct: 112 EEFQLDSEISRRILATTKYISYGALQRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITR 171

Query: 107 CR 108
           CR
Sbjct: 172 CR 173


>Glyma19g42200.1 
          Length = 163

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 48  EEAEMESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITR 106
           EE +++SEISRR+L   KYISY  L+R+ VPC++ GASYY+C  G +ANPYSRGC  ITR
Sbjct: 101 EEFQLDSEISRRILATTKYISYGALQRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITR 160

Query: 107 CR 108
           CR
Sbjct: 161 CR 162


>Glyma10g29260.1 
          Length = 117

 Score = 86.3 bits (212), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 48  EEAEMESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITR 106
           EE E++SEI+RR+L   KYISY  L+R+ VPC++ GASYY+C  G +ANPYSRGC  ITR
Sbjct: 55  EEYELDSEINRRILATNKYISYGALQRNTVPCSRRGASYYNCRPGAQANPYSRGCSAITR 114

Query: 107 CR 108
           CR
Sbjct: 115 CR 116


>Glyma20g38020.1 
          Length = 117

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 48  EEAEMESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITR 106
           EE E++SEI+RR+L   KYISY  L+R+  PC++ GASYY+C  G +ANPYSRGC  ITR
Sbjct: 55  EEYELDSEINRRILATNKYISYVALQRNTAPCSRRGASYYNCRPGAQANPYSRGCSAITR 114

Query: 107 CR 108
           CR
Sbjct: 115 CR 116


>Glyma08g11470.1 
          Length = 82

 Score = 82.8 bits (203), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 3/66 (4%)

Query: 45  DWLEEAEMESEISRRVL---LMQKYISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGC 101
           + L E EM+SE +RRVL      KYISY TLKRDMVPC + GASYY+ HA  ANPY+RGC
Sbjct: 8   ECLAEPEMDSESNRRVLEGVQHIKYISYGTLKRDMVPCDRAGASYYNFHARPANPYNRGC 67

Query: 102 EVITRC 107
           EVIT C
Sbjct: 68  EVITGC 73


>Glyma17g02940.1 
          Length = 150

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)

Query: 49  EAEMESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRC 107
           E  MESE +RR+L  + YISY  L+R+ VPC++ GASYY+C  G +ANPYSRGC  ITRC
Sbjct: 89  EFLMESESNRRILAGRSYISYGALRRNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRC 148

Query: 108 R 108
           R
Sbjct: 149 R 149


>Glyma07g37690.1 
          Length = 118

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 49/64 (76%), Gaps = 3/64 (4%)

Query: 48  EEAE--MESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVI 104
           ++AE  MESE +RR+L  + YISY  L+R+ VPC++ GASYY+C  G +ANPYSRGC  I
Sbjct: 54  DDAEFLMESESNRRILAGRSYISYGALRRNTVPCSRRGASYYNCRPGAQANPYSRGCSAI 113

Query: 105 TRCR 108
           TRCR
Sbjct: 114 TRCR 117


>Glyma19g39730.1 
          Length = 115

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 1/61 (1%)

Query: 49  EAEMESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRC 107
           E  M+SE  RR+L   +YISY+ L+R+ VPC++ GASYY+C  G +ANPY+RGC  ITRC
Sbjct: 53  EFGMDSESHRRILATSQYISYKALQRNTVPCSRRGASYYNCKPGADANPYTRGCPTITRC 112

Query: 108 R 108
           R
Sbjct: 113 R 113


>Glyma03g37110.1 
          Length = 115

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 1/61 (1%)

Query: 49  EAEMESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRC 107
           E  M+SE  RR+L   +YISY+ L+R+ VPC++ GASYY+C  G +ANPY+RGC  ITRC
Sbjct: 53  EFGMDSESHRRILATSQYISYKALQRNTVPCSRRGASYYNCKPGADANPYTRGCPTITRC 112

Query: 108 R 108
           R
Sbjct: 113 R 113


>Glyma07g31790.1 
          Length = 111

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 48  EEAEMESEISRRVLL-MQKYISYETLKRDMVPCAKPGASYYDCHA-GEANPYSRGCEVIT 105
            E  ++SE +RR L   Q+YISY  L  + VPC   G SYY+C   G ANPY+RGC  IT
Sbjct: 45  NEMLLDSETNRRTLAGRQQYISYGALNANNVPCGNRGRSYYNCQQRGRANPYNRGCTQIT 104

Query: 106 RC 107
            C
Sbjct: 105 HC 106


>Glyma13g24680.1 
          Length = 111

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 48  EEAEMESEISRRVLL-MQKYISYETLKRDMVPCAKPGASYYDCHA-GEANPYSRGCEVIT 105
            E  ++SE +RR L   Q+YISY  L  + VPC   G SYY+C   G ANPY+RGC  IT
Sbjct: 45  NEMLLDSESNRRTLTGRQRYISYGALNANNVPCGNRGRSYYNCQQRGRANPYNRGCTKIT 104

Query: 106 RC 107
            C
Sbjct: 105 HC 106


>Glyma15g08170.1 
          Length = 124

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 10/66 (15%)

Query: 52  MESEISRRVLL---------MQKYISYETLKRDMVPCAKPGASYYDCHA-GEANPYSRGC 101
           M SE +RR L+           +YISY  L+ + VPC + G SYY+C+  G ANPY+RGC
Sbjct: 54  MSSESTRRSLMHGHPGKGRGRARYISYAALRSNQVPCGRRGRSYYNCNQRGRANPYNRGC 113

Query: 102 EVITRC 107
             IT C
Sbjct: 114 TAITHC 119


>Glyma13g31170.1 
          Length = 74

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 8/64 (12%)

Query: 52  MESEISRRVLL-------MQKYISYETLKRDMVPCAKPGASYYDCHA-GEANPYSRGCEV 103
           M SE + R L+         +YISY  L+ + +PC + G SYY+C+  G ANPYSRGC  
Sbjct: 6   MSSESTPRSLMHGHPGKGRARYISYAALRSNQIPCGRRGRSYYNCNERGRANPYSRGCIA 65

Query: 104 ITRC 107
           IT C
Sbjct: 66  ITHC 69


>Glyma01g39370.1 
          Length = 174

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 18/109 (16%)

Query: 18  FAICNGVSVSGLNSLENTEIDAVMRRVDWL----------EEAEMESEISRRVLL---MQ 64
           F I     V     +E T ++ +   ++W           EE ++++  SRR L    M+
Sbjct: 65  FCIALTSEVGVQAQMEETGLNLMSEALEWPTAMSLYDEDSEEEDVQNGYSRRSLFWRRMK 124

Query: 65  KYISYETLKRDMVPCA-KPGASYY--DCHA--GEANPYSRGCEVITRCR 108
            YISY  L  + +PC  + G SYY  +C+   G  +PYSRGC VITRCR
Sbjct: 125 YYISYGALSANRIPCPPRSGRSYYTHNCYRARGPVHPYSRGCSVITRCR 173


>Glyma11g05900.1 
          Length = 121

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 18/109 (16%)

Query: 18  FAICNGVSVSGLNSLENTEIDAVMRRVDWLE----------EAEMESEISRRVLL---MQ 64
           F I     V+    +E+T  + +   ++W            + ++E+  SRR L    M+
Sbjct: 12  FCIAFTSHVAVQAHMEDTAFNLMSDALEWPTTMSLYDEDDAQEDVENAYSRRSLFWRRMK 71

Query: 65  KYISYETLKRDMVPCA-KPGASYY--DCHA--GEANPYSRGCEVITRCR 108
            YISY  L  + +PC  + G SYY  +C+   G  +PYSRGC  ITRCR
Sbjct: 72  YYISYGALSANRIPCPPRSGRSYYTHNCYRARGPVHPYSRGCSAITRCR 120