Jatropha Genome Database

JcCB0030781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0030781.10 - phase: 0 /partial
         (268 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03210.1                                                       407   e-114
Glyma05g36370.1                                                       313   1e-85
Glyma08g03210.2                                                       211   7e-55
Glyma06g10540.1                                                       166   2e-41
Glyma19g33620.1                                                        93   3e-19
Glyma03g30770.1                                                        90   2e-18

>Glyma08g03210.1 
          Length = 756

 Score =  407 bits (1045), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/266 (72%), Positives = 214/266 (80%)

Query: 3   SMNQEGGRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGE 62
           ++ Q GGRKPW+SINFVCAHDGFTLADLVTY                       CG EGE
Sbjct: 491 NLYQGGGRKPWHSINFVCAHDGFTLADLVTYNNKNNLSNGEDNNDGENHNNSWNCGQEGE 550

Query: 63  FASISVKKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDK 122
           F S SVKKLRKRQMRNFF+ LMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNY NYF+WDK
Sbjct: 551 FVSTSVKKLRKRQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYHNYFQWDK 610

Query: 123 KEESSSDFYRFCCLMTKFRSECESLGLNDFPTAERLQWHGHVPRMPDWSETSRFVAFTVT 182
           KEESSSDF+RFC LMTKFR ECESLGL DFPT+ERLQWHGH P  PDWSETSRFVA T+ 
Sbjct: 611 KEESSSDFFRFCRLMTKFRQECESLGLADFPTSERLQWHGHFPGKPDWSETSRFVACTMV 670

Query: 183 DTVKGEIYVAFNAKHLPVTVALPERLGYRWEPLVDTGKASPFDFLSGDVPEREIAIKQYS 242
           D+VKGEIY+AFN  HLP TV LPER GY+WEPLVDT K +P+DFL+ D+P R+IAI+QY+
Sbjct: 671 DSVKGEIYIAFNMSHLPFTVTLPERPGYKWEPLVDTSKPTPYDFLTPDLPGRDIAIQQYA 730

Query: 243 HFLDANLYPMHSYSSIILTLSPDDNV 268
            FLDAN+YPM SYSSIIL   PD+N+
Sbjct: 731 QFLDANMYPMLSYSSIILLRIPDENL 756


>Glyma05g36370.1 
          Length = 399

 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 166/270 (61%), Positives = 185/270 (68%), Gaps = 20/270 (7%)

Query: 8   GGRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGEFASIS 67
           GGRKPW+SINF+CAHDGFTLADLVTY                       CG EGEF S S
Sbjct: 136 GGRKPWHSINFICAHDGFTLADLVTYNNKNNLSNGEDNNDGENHNNSWNCGQEGEFVSTS 195

Query: 68  VKKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEESS 127
           VKKLRK QMRNFF+ LMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNY+NYFRWDKKEESS
Sbjct: 196 VKKLRKPQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYLNYFRWDKKEESS 255

Query: 128 SDFYRFCCLMTKF-RSEC--------ESLGLNDFPTAERLQWHGHVPRMPDWSETSRFVA 178
           SDF+RFC LMTKF R +C        E L L+ F   E    +          E  R   
Sbjct: 256 SDFFRFCRLMTKFHRCQCNAQISISRELLILSCFIYFEFFCLN----------ENVRSCT 305

Query: 179 FTV-TDTVKGEIYVAFNAKHLPVTVALPERLGYRWEPLVDTGKASPFDFLSGDVPEREIA 237
           F    D+VKGEIY+A N  HLP  V LP+  GYRWEPLVDT K SP+DFL+ D+P R+IA
Sbjct: 306 FYYRVDSVKGEIYIALNMSHLPFRVTLPDCPGYRWEPLVDTSKPSPYDFLTPDLPGRDIA 365

Query: 238 IKQYSHFLDANLYPMHSYSSIILTLSPDDN 267
           I+QY+ FLDAN+YPM SYSSIIL   PD+N
Sbjct: 366 IQQYAQFLDANMYPMLSYSSIILLRIPDEN 395


>Glyma08g03210.2 
          Length = 630

 Score =  211 bits (537), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 102/139 (73%), Positives = 108/139 (77%)

Query: 3   SMNQEGGRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGE 62
           ++ Q GGRKPW+SINFVCAHDGFTLADLVTY                       CG EGE
Sbjct: 491 NLYQGGGRKPWHSINFVCAHDGFTLADLVTYNNKNNLSNGEDNNDGENHNNSWNCGQEGE 550

Query: 63  FASISVKKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDK 122
           F S SVKKLRKRQMRNFF+ LMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNY NYF+WDK
Sbjct: 551 FVSTSVKKLRKRQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYHNYFQWDK 610

Query: 123 KEESSSDFYRFCCLMTKFR 141
           KEESSSDF+RFC LMTKFR
Sbjct: 611 KEESSSDFFRFCRLMTKFR 629


>Glyma06g10540.1 
          Length = 685

 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/253 (40%), Positives = 129/253 (50%), Gaps = 28/253 (11%)

Query: 10  RKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGEFASISVK 69
           R+P++ INFV AHDGFTL DLV+Y                       CGLEGE    SV+
Sbjct: 455 RRPYHGINFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGSNDNFSWNCGLEGETDDASVR 514

Query: 70  KLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEESSSD 129
            LR RQM+NF + LM+SQG PM+ MGDEYGHT+ GNNN+Y HD  IN F          D
Sbjct: 515 ALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRNGNNNSYGHDTAINNF---------FD 565

Query: 130 FYRFCCLMTKFRSECESLGLNDFPTAERLQWHGHVPRMPDW-SETSRFVAFTVTDTVKGE 188
            +RF   M K+R   E      F +   + WH       +W +  S+F+AFT+ D   G+
Sbjct: 566 HFRFFSNMIKYRHAHEVFNHESFLSKNDITWH-----EDNWDNHDSKFLAFTLHDKSGGD 620

Query: 189 IYVAFNAKHLPVTVALPERLGYR-WEPLVDTGKASPFDFLSGDVPEREIAIKQYSHFLDA 247
           IY+AFNA    V V LP     R W  +VDT   SP DF+   VP               
Sbjct: 621 IYLAFNAHDYFVKVLLPAPPKKRNWFRVVDTNLKSPDDFVLDGVPNV------------G 668

Query: 248 NLYPMHSYSSIIL 260
           N Y +  YSSI+L
Sbjct: 669 NTYNIAPYSSILL 681


>Glyma19g33620.1 
          Length = 671

 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 113/254 (44%), Gaps = 40/254 (15%)

Query: 8   GGRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGEFASIS 67
           GGR P  S N++  + G +L DLV++                       CG EG   + +
Sbjct: 421 GGRGPGFSFNYIARNFGVSLVDLVSFSSVDELSWN--------------CGAEGPTNNTA 466

Query: 68  VKKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKE--- 124
           V + R +Q+RNF   L VS GVP++ MGDE G + GG    +   + I  F W   +   
Sbjct: 467 VLERRLKQIRNFLFILFVSLGVPVLNMGDECGQSSGG----FTAYDGIKPFSWSALKTGF 522

Query: 125 -ESSSDFYRFCCLMTKFRSECESLGLNDFPTAERLQWHGHVPRMPDW------------- 170
            + +S+F  F   + K RS    L    F   E ++W+G     P W             
Sbjct: 523 GKQTSEFIFFLSSLRKRRSYL--LQRRSFLKEENIEWYGSDGDPPRWEDPSCKFLAMILK 580

Query: 171 SETSRFVAFTVTDTVKGEIYVAFNAKHLPVTVALP-ERLGYRWEPLVDTGKASP-FDFLS 228
           +E + F+  +V+  + G++++AFNA   P T  LP    G  W  LVDT    P F   S
Sbjct: 581 AEVTEFLESSVSSDISGDLFIAFNATDHPETAVLPLPPEGMSWYRLVDTALPFPGFFSTS 640

Query: 229 GD-VPEREIAIKQY 241
           G+ VPE+   +  Y
Sbjct: 641 GEVVPEQTEGLFTY 654


>Glyma03g30770.1 
          Length = 598

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 111/254 (43%), Gaps = 40/254 (15%)

Query: 8   GGRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGEFASIS 67
           GGR P  S N++  + G +L DLV++                       CG EG   + +
Sbjct: 362 GGRGPAFSFNYIARNFGVSLVDLVSFSSTDELSWN--------------CGEEGPTNNTA 407

Query: 68  VKKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKE--- 124
           + + R +Q+RNF   L VS GVP++ MGDE G + GG    +   + I  F W   +   
Sbjct: 408 ILERRLKQIRNFLFILFVSLGVPVLNMGDECGQSSGG----FTAYDGIKPFSWSSLKTGF 463

Query: 125 -ESSSDFYRFCCLMTKFRSECESLGLNDFPTAERLQWHGHVPRMPDW------------- 170
            + +S F  F     + RS+   L    F   E ++W+G     P W             
Sbjct: 464 GKQTSQFIFFLSSFRRRRSDL--LQRMSFLKEENIEWYGSDGAPPRWEDLSCKFLAMALK 521

Query: 171 SETSRFVAFTVTDTVKGEIYVAFNAKHLPVTVALP-ERLGYRWEPLVDTGKASP-FDFLS 228
           +E   F+  +V+  + G++++AFNA   P T  LP    G  W  LVDT    P F   S
Sbjct: 522 AEEKEFLESSVSSDISGDLFIAFNAAGHPETAVLPLPPEGMLWYRLVDTALPFPGFFSAS 581

Query: 229 GD-VPEREIAIKQY 241
           G+ VPE+   +  Y
Sbjct: 582 GEVVPEQTAGLFTY 595