Jatropha Genome Database

JcCB0030711.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0030711.30 + phase: 0 /partial
         (265 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g02220.2                                                       303   1e-82
Glyma14g02220.1                                                       303   1e-82
Glyma02g46430.1                                                       292   2e-79
Glyma14g02420.1                                                       255   3e-68
Glyma14g02400.1                                                       213   1e-55
Glyma14g02390.1                                                       131   6e-31

>Glyma14g02220.2 
          Length = 542

 Score =  303 bits (775), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 160/278 (57%), Positives = 196/278 (70%), Gaps = 24/278 (8%)

Query: 1   MELCIRSRAILNWNQQIPQFLGKFSVSATLNNQFLQVNKNKSKNPF--NSYKLT------ 52
           MELC R+            FL  F+ S++ N  FL+ N N +K PF  NS KL+      
Sbjct: 1   MELCTRTFTSF--------FL--FNPSSSSNPLFLRANAN-AKTPFKFNSLKLSSFPPHI 49

Query: 53  ----PLWRQSHCPAFPQCARKXXXXXXXXXXXXXXXKDRLPADIRVTETVEPNSRLRLTV 108
               P         F   A                 +DRLPA++ VTET EPNSR+RL V
Sbjct: 50  HLFQPFLSPHTSSPFTLSAASASSSSSSSSVAVGTEQDRLPAELNVTETAEPNSRVRLHV 109

Query: 109 EVPEAVCDDCYSRVMNEFMKQARVPGFRPGKNVPESILLSYVGKENVQKATIESVLKRTL 168
           EVP  VC+DCY RV+ EFMKQA++PGFRPGK VPESIL+SYVG +NVQKATIES+L+RTL
Sbjct: 110 EVPSLVCEDCYKRVIAEFMKQAKIPGFRPGKKVPESILISYVGSQNVQKATIESILRRTL 169

Query: 169 PHAMSSVTGRALRDSIRIVTKFSDMEKAYSSLNTLRYDIIVDVAPEVKWIPE-NAYKILK 227
            HAM+SVTGRAL+DS+RIVTKFS+ME+ YSSL +LRYD++VD+APE+KWIP+ NAYK LK
Sbjct: 170 SHAMTSVTGRALQDSVRIVTKFSEMEETYSSLGSLRYDVLVDIAPEIKWIPDNNAYKNLK 229

Query: 228 IVVEIDSDVDAQTASEKELRRRQKSLGAMRIVTDRGLQ 265
           IVVEIDSD+DA TASE+E RRR KS+GA+++VTDRGLQ
Sbjct: 230 IVVEIDSDIDAHTASEQEFRRRYKSIGALKVVTDRGLQ 267


>Glyma14g02220.1 
          Length = 545

 Score =  303 bits (775), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 160/278 (57%), Positives = 196/278 (70%), Gaps = 24/278 (8%)

Query: 1   MELCIRSRAILNWNQQIPQFLGKFSVSATLNNQFLQVNKNKSKNPF--NSYKLT------ 52
           MELC R+            FL  F+ S++ N  FL+ N N +K PF  NS KL+      
Sbjct: 1   MELCTRTFTSF--------FL--FNPSSSSNPLFLRANAN-AKTPFKFNSLKLSSFPPHI 49

Query: 53  ----PLWRQSHCPAFPQCARKXXXXXXXXXXXXXXXKDRLPADIRVTETVEPNSRLRLTV 108
               P         F   A                 +DRLPA++ VTET EPNSR+RL V
Sbjct: 50  HLFQPFLSPHTSSPFTLSAASASSSSSSSSVAVGTEQDRLPAELNVTETAEPNSRVRLHV 109

Query: 109 EVPEAVCDDCYSRVMNEFMKQARVPGFRPGKNVPESILLSYVGKENVQKATIESVLKRTL 168
           EVP  VC+DCY RV+ EFMKQA++PGFRPGK VPESIL+SYVG +NVQKATIES+L+RTL
Sbjct: 110 EVPSLVCEDCYKRVIAEFMKQAKIPGFRPGKKVPESILISYVGSQNVQKATIESILRRTL 169

Query: 169 PHAMSSVTGRALRDSIRIVTKFSDMEKAYSSLNTLRYDIIVDVAPEVKWIPE-NAYKILK 227
            HAM+SVTGRAL+DS+RIVTKFS+ME+ YSSL +LRYD++VD+APE+KWIP+ NAYK LK
Sbjct: 170 SHAMTSVTGRALQDSVRIVTKFSEMEETYSSLGSLRYDVLVDIAPEIKWIPDNNAYKNLK 229

Query: 228 IVVEIDSDVDAQTASEKELRRRQKSLGAMRIVTDRGLQ 265
           IVVEIDSD+DA TASE+E RRR KS+GA+++VTDRGLQ
Sbjct: 230 IVVEIDSDIDAHTASEQEFRRRYKSIGALKVVTDRGLQ 267


>Glyma02g46430.1 
          Length = 542

 Score =  292 bits (748), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 154/274 (56%), Positives = 194/274 (70%), Gaps = 19/274 (6%)

Query: 1   MELCIRSRAILNWNQQIPQFLGKFSVSATLNNQFLQVNKNKSKN-PFNSYKLTPLWRQSH 59
           MELC R+            FL  F+ S + N+ FL+ N N +    FNS KL+      H
Sbjct: 1   MELCTRT---------FTSFL-LFNPSFSPNSVFLRANPNATTPLKFNSLKLSSFSPHVH 50

Query: 60  C--PAF-PQCAR----KXXXXXXXXXXXXXXXKDRLPADIRVTETVEPNSRLRLTVEVPE 112
              P   P  +                     +DRLPA+++VTET EPNSR+RL VEVP 
Sbjct: 51  LFQPFLSPHISSPFTLSAAASASSSSVAVGTEQDRLPAELKVTETEEPNSRVRLHVEVPS 110

Query: 113 AVCDDCYSRVMNEFMKQARVPGFRPGKNVPESILLSYVGKENVQKATIESVLKRTLPHAM 172
            VC+DCY RV+ EFMKQA++PGFRPGK VPE+IL+SYVG +NVQKATIES+L+RTL HAM
Sbjct: 111 LVCEDCYKRVITEFMKQAKIPGFRPGKKVPENILISYVGSQNVQKATIESILRRTLSHAM 170

Query: 173 SSVTGRALRDSIRIVTKFSDMEKAYSSLNTLRYDIIVDVAPEVKWIPE-NAYKILKIVVE 231
           +SVTGRAL+DS++IVTKFS+ME+ YSSL +LRYD++VD+APE+KWIP+ NAYK LKIVVE
Sbjct: 171 TSVTGRALQDSVQIVTKFSEMEETYSSLGSLRYDVLVDIAPEIKWIPDNNAYKNLKIVVE 230

Query: 232 IDSDVDAQTASEKELRRRQKSLGAMRIVTDRGLQ 265
           IDSD+DA  ASE+E RRR KS+GA+++V DRGLQ
Sbjct: 231 IDSDIDAHRASEQEFRRRYKSIGALKVVIDRGLQ 264


>Glyma14g02420.1 
          Length = 259

 Score =  255 bits (652), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 116/164 (70%), Positives = 145/164 (88%), Gaps = 1/164 (0%)

Query: 101 NSRLRLTVEVPEAVCDDCYSRVMNEFMKQARVPGFRPGKNVPESILLSYVGKENVQKATI 160
            + +RL VEVP  VC+DCY RV+ EFMKQA++PGFRPGK VPESIL+SYVG +NVQKATI
Sbjct: 4   GTLVRLHVEVPSLVCEDCYKRVIAEFMKQAKIPGFRPGKKVPESILISYVGSQNVQKATI 63

Query: 161 ESVLKRTLPHAMSSVTGRALRDSIRIVTKFSDMEKAYSSLNTLRYDIIVDVAPEVKWIPE 220
           ES+L+RTL HAM+SVTGRAL++S+RIVTKFS+ME+ YSSL +L YD++VD+APE+KWIP+
Sbjct: 64  ESILRRTLSHAMTSVTGRALQESVRIVTKFSEMEETYSSLGSLGYDVLVDIAPEIKWIPD 123

Query: 221 -NAYKILKIVVEIDSDVDAQTASEKELRRRQKSLGAMRIVTDRG 263
            NAYK LKIVVE+DSD+DA TASE+E RRR KS+GA+++VTDR 
Sbjct: 124 NNAYKNLKIVVEMDSDIDAHTASEQEFRRRYKSIGALKVVTDRA 167


>Glyma14g02400.1 
          Length = 231

 Score =  213 bits (543), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 97/134 (72%), Positives = 122/134 (91%), Gaps = 1/134 (0%)

Query: 131 RVPGFRPGKNVPESILLSYVGKENVQKATIESVLKRTLPHAMSSVTGRALRDSIRIVTKF 190
           ++PGFRPGK VPESIL+SYVG +NVQKATIES+L+RTL HAM+SVTGRAL++S+RIVTKF
Sbjct: 1   QIPGFRPGKKVPESILISYVGSQNVQKATIESILRRTLSHAMTSVTGRALQESVRIVTKF 60

Query: 191 SDMEKAYSSLNTLRYDIIVDVAPEVKWIPE-NAYKILKIVVEIDSDVDAQTASEKELRRR 249
           S+ME+ YSSL +L YD++VD+APE+KWIP+ NAYK LKIVVE+DSD+DA TASE+E RRR
Sbjct: 61  SEMEETYSSLGSLGYDVLVDIAPEIKWIPDNNAYKNLKIVVEMDSDIDAHTASEQEFRRR 120

Query: 250 QKSLGAMRIVTDRG 263
            KS+GA+++VTDR 
Sbjct: 121 YKSIGALKVVTDRA 134


>Glyma14g02390.1 
          Length = 412

 Score =  131 bits (330), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/150 (50%), Positives = 101/150 (67%), Gaps = 20/150 (13%)

Query: 119 YSRVM--NEFMKQARVP-GFRPGKNVPESILLSYVGKE-NVQKATIESVLKRTLPHAMSS 174
           YSRV+    ++     P G+ P          +Y G E N   A ++       P A +S
Sbjct: 176 YSRVIFHGTYLSSVVTPEGWNP---------WNYTGSESNFTYAEVDC----KGPGADTS 222

Query: 175 --VTGRALRDSIRIVTKFSDMEKAYSSLNTLRYDIIVDVAPEVKWIPE-NAYKILKIVVE 231
             VTGRAL++S+RIVT FS+ME+ YSSL +L YD++VD+APE+KWIP+ NAYK LKIVVE
Sbjct: 223 KRVTGRALQESVRIVTNFSEMEETYSSLGSLGYDVLVDIAPEIKWIPDNNAYKNLKIVVE 282

Query: 232 IDSDVDAQTASEKELRRRQKSLGAMRIVTD 261
           +DSD+DA TASE+E RRR KS+GA+++V D
Sbjct: 283 MDSDIDAHTASEQEFRRRYKSIGALKVVGD 312