Jatropha Genome Database

JcCB0030711.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0030711.20 - phase: 0 
         (187 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g10110.1                                                       111   4e-25
Glyma08g43440.1                                                       107   6e-24
Glyma09g01220.1                                                        89   3e-18
Glyma15g12050.1                                                        87   1e-17

>Glyma18g10110.1 
          Length = 175

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 92/168 (54%), Gaps = 13/168 (7%)

Query: 1   MEGVGSRLGRASSRYGPSATATVFNGPVRKWKKKWXXXXXXXXXXXXXXXXXXXXXXXXX 60
           ME VGSRL RASSRYG     TVF+GPVRKWKKKW                         
Sbjct: 1   MEAVGSRLSRASSRYG---APTVFSGPVRKWKKKWVHVTPSSLPNNSSHSHTNNSTTTS- 56

Query: 61  XXTTNSRLLLCRWTPLSPADA---TSEEPPKRKFRYTPIVVLEEEQRKAAKQVDHEAKTD 117
             + +SRLLL RWTP +  DA    S+EPP+RKFRYTP+VVLEE+++    + +HE   +
Sbjct: 57  --SASSRLLLRRWTPATVDDAAGAVSDEPPRRKFRYTPVVVLEEQKKMNVVKAEHEPTIE 114

Query: 118 GTNQFTALHPSKNDELN---NDTALKTETQDSNVSNLDLDLCLKGHNG 162
            T+Q  A   +   E+    N   +  ET+DSN+ NLDL    + + G
Sbjct: 115 -TDQLAARKTNVTHEMQGKLNMNEMLEETKDSNIGNLDLGSDFQSNTG 161


>Glyma08g43440.1 
          Length = 176

 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 89/169 (52%), Gaps = 12/169 (7%)

Query: 1   MEGVGSRLGRASSRYGPSATATVFNGPVRKWKKKWXXXXXXXXXXXXXXXXXXXXXXXXX 60
           ME VGSRL RA+SRYG     TVF+GPVRKWKKKW                         
Sbjct: 1   MEAVGSRLSRATSRYG---APTVFSGPVRKWKKKWVHVTPSSLPNNNSHSHTNNFTTTTT 57

Query: 61  XXTTNSRLLLCRWTPLSPAD---ATSEEPPKRKFRYTPIVVLEEEQRKAAKQVDHEAKTD 117
             +  SRLLL RWTP +  D   A S++PP+RKFRYTPI VLEE+++    + +HE   +
Sbjct: 58  NDS--SRLLLRRWTPTTADDSAGAVSDDPPRRKFRYTPIAVLEEQKKMNVVKAEHEPTIE 115

Query: 118 GTNQFTALHPSKNDELN---NDTALKTETQDSNVSNLDLDLCLKGHNGD 163
             +Q      +   E+    N   +  ET+DSN+ NLDL    + + G+
Sbjct: 116 A-DQLAFRQTNVTHEMQGKLNMNEMLEETKDSNIGNLDLGSDFQSNTGE 163


>Glyma09g01220.1 
          Length = 202

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 43/208 (20%)

Query: 1   MEGVGSRLGRASSRYGPSATATVFNGPVRKWKKKWXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGVG+RLGR+S+RYGP   ATVF GPVRKWKKKW                         
Sbjct: 1   MEGVGARLGRSSTRYGP---ATVFTGPVRKWKKKWIHVSPSSASSNSNANNHHNHA---- 53

Query: 61  XXTTNSRLLLCRWTPLSPADATSEEPP---------------KRKFRYTPIVVLEEEQRK 105
             +  S LLL +WTPL+ +  T+                   +RKF+Y P+ +LEE++ +
Sbjct: 54  --SHASHLLLYKWTPLTHSQNTATTNNANAKDSPPEPPEEPPRRKFKYVPVALLEEQKNE 111

Query: 106 AA-----KQVDHEAKTDGTNQFTALHPSKNDELN-----NDTALKTET---------QDS 146
            A     ++VD E+K    +   A    KN+ L+     ND  ++            QD 
Sbjct: 112 GAESEGTEKVDEESKPIDADSGAAEATHKNETLDEKPDINDVPMEESQSQYKNQVVRQDL 171

Query: 147 NVSNLDLDLCLKGHNGDPDSVGRTKESQ 174
           N S LDL L L  H+ + DS  +T +++
Sbjct: 172 NESTLDLSLGLTSHDDEHDSDSKTNQTR 199


>Glyma15g12050.1 
          Length = 201

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 48/210 (22%)

Query: 1   MEGVGSRLGRASSRYGPSATATVFNGPVRKWKKKWXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGVG+RLGR+S+RYGP   ATVF GPVRKWKKKW                         
Sbjct: 1   MEGVGARLGRSSTRYGP---ATVFTGPVRKWKKKWIHVSPSSASSNSNANNHA------- 50

Query: 61  XXTTNSRLLLCRWTPLSPADATSEEPPKR-----------------KFRYTPIVVLEEEQ 103
             +  S LLL +WTPL+ +  T+                       KF+Y P+ +LEE++
Sbjct: 51  --SNASHLLLYKWTPLTQSQNTTNNANANGNAKDAPPEPPAEPPRRKFKYVPVALLEEQK 108

Query: 104 RKAA-----KQVDHEAKTDGTNQFTALHPSKNDELN-----NDTALKTET---------Q 144
            +AA     ++VD E+K    +   A    KN+ L+     ND  ++            Q
Sbjct: 109 NEAAENEGTEKVDEESKPIDVDSGAAEATRKNETLDEKPDINDVPMEESQSQYKNQVVRQ 168

Query: 145 DSNVSNLDLDLCLKGHNGDPDSVGRTKESQ 174
           D N S LDL L L  H+ + DS  +T +++
Sbjct: 169 DLNESTLDLSLGLTSHDDEHDSDSKTNQTR 198