Jatropha Genome Database

JcCB0030711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0030711.10 + phase: 0 
         (343 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46390.1                                                       306   2e-83
Glyma02g46390.3                                                       279   4e-75
Glyma02g46390.2                                                       276   3e-74
Glyma18g10120.1                                                       267   2e-71
Glyma08g43430.1                                                       260   2e-69
Glyma18g39460.1                                                        92   1e-18
Glyma03g00840.1                                                        56   5e-08
Glyma06g11310.1                                                        55   1e-07

>Glyma02g46390.1 
          Length = 335

 Score =  306 bits (785), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/306 (55%), Positives = 208/306 (67%), Gaps = 16/306 (5%)

Query: 35  FSN-QIDSLISEHSKQFVPGQVSLFHHSALSSSPFQRFGFTSSASPETNEKEEGSTAENN 93
           F+N  + SL+     + +P Q++L     ++S    RFGF+SSAS E N+K+  +   +N
Sbjct: 32  FANINLHSLLPHSPNKVIPVQLNLLL-PPINSLSAPRFGFSSSASTENNDKKNRNNV-HN 89

Query: 94  GASRNADAKPSNK--------TEDSASEESEKSGCNSESQPTMSQSVKRRRSGTKRTAFX 145
           G S NAD   +N+         +D  ++++E+SG  S+SQ   SQ+VKRRR G KRTAF 
Sbjct: 90  GDSTNADPAKANEEAKNNDQARQDKPADKTEESGSISDSQ---SQTVKRRRRGFKRTAFS 146

Query: 146 XXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXMQDKVLRTYAEMENVMERTKREAEN 203
                                              MQDKVLRTYAEMENVMERT+REA+N
Sbjct: 147 DSDSESECDLSRDDLIKLVAEKEELVMLKHKEIEKMQDKVLRTYAEMENVMERTRREADN 206

Query: 204 SKKFAVQNFAKSLLDVADNLGRASAVVKDSFSKIDASTDATGAVPLLKTLLEGVEMTEKQ 263
           SKKFA+QNFAKSLLDVADNLGRAS+V  ++FSKID S+D+   V LLKTLL+GVEMTEKQ
Sbjct: 207 SKKFALQNFAKSLLDVADNLGRASSVATENFSKIDTSSDSAEVVKLLKTLLQGVEMTEKQ 266

Query: 264 LADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDASKPPGTVAAVLKAGYVLYDRVIRPAE 323
           L +V KKFGVEKFDP NEPFDPH+H A+FQ+PD SKPPGTVAAVLKAGY+LYDRVIRPAE
Sbjct: 267 LVEVLKKFGVEKFDPTNEPFDPHRHNAIFQIPDGSKPPGTVAAVLKAGYMLYDRVIRPAE 326

Query: 324 VGVTIA 329
           VGVT A
Sbjct: 327 VGVTHA 332


>Glyma02g46390.3 
          Length = 309

 Score =  279 bits (713), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 157/297 (52%), Positives = 194/297 (65%), Gaps = 24/297 (8%)

Query: 35  FSN-QIDSLISEHSKQFVPGQVSLFHHSALSSSPFQRFGFTSSASPETNEKEEGSTAENN 93
           F+N  + SL+     + +P Q++L     ++S    RFGF+SSAS E N+K+  +   +N
Sbjct: 32  FANINLHSLLPHSPNKVIPVQLNLLL-PPINSLSAPRFGFSSSASTENNDKKNRNNV-HN 89

Query: 94  GASRNAD-AKPSNKTEDSASEESEKSGCNSESQPTMSQSVKRRRSGTKRTAFXXXXXXXX 152
           G S NAD AK + + +++     +K    +E   + S+    R    K  A         
Sbjct: 90  GDSTNADPAKANEEAKNNDQARQDKPADKTEESDSESECDLSRDDLIKLVA--------- 140

Query: 153 XXXXXXXXXXXXXXXXXXXXXXXXXXMQDKVLRTYAEMENVMERTKREAENSKKFAVQNF 212
                                     MQDKVLRTYAEMENVMERT+REA+NSKKFA+QNF
Sbjct: 141 -----------EKEELVMLKHKEIEKMQDKVLRTYAEMENVMERTRREADNSKKFALQNF 189

Query: 213 AKSLLDVADNLGRASAVVKDSFSKIDASTDATGAVPLLKTLLEGVEMTEKQLADVFKKFG 272
           AKSLLDVADNLGRAS+V  ++FSKID S+D+   V LLKTLL+GVEMTEKQL +V KKFG
Sbjct: 190 AKSLLDVADNLGRASSVATENFSKIDTSSDSAEVVKLLKTLLQGVEMTEKQLVEVLKKFG 249

Query: 273 VEKFDPINEPFDPHKHYAVFQLPDASKPPGTVAAVLKAGYVLYDRVIRPAEVGVTIA 329
           VEKFDP NEPFDPH+H A+FQ+PD SKPPGTVAAVLKAGY+LYDRVIRPAEVGVT A
Sbjct: 250 VEKFDPTNEPFDPHRHNAIFQIPDGSKPPGTVAAVLKAGYMLYDRVIRPAEVGVTHA 306


>Glyma02g46390.2 
          Length = 319

 Score =  276 bits (705), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/288 (53%), Positives = 189/288 (65%), Gaps = 23/288 (7%)

Query: 43  ISEHSKQFVPGQVSLFHHSALSSSPFQRFGFTSSASPETNEKEEGSTAENNGASRNAD-A 101
           IS    + +P Q++L     ++S    RFGF+SSAS E N+K+  +   +NG S NAD A
Sbjct: 51  ISILVNKVIPVQLNLLL-PPINSLSAPRFGFSSSASTENNDKKNRNNV-HNGDSTNADPA 108

Query: 102 KPSNKTEDSASEESEKSGCNSESQPTMSQSVKRRRSGTKRTAFXXXXXXXXXXXXXXXXX 161
           K + + +++     +K    +E   + S+    R    K  A                  
Sbjct: 109 KANEEAKNNDQARQDKPADKTEESDSESECDLSRDDLIKLVA------------------ 150

Query: 162 XXXXXXXXXXXXXXXXXMQDKVLRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVAD 221
                            MQDKVLRTYAEMENVMERT+REA+NSKKFA+QNFAKSLLDVAD
Sbjct: 151 --EKEELVMLKHKEIEKMQDKVLRTYAEMENVMERTRREADNSKKFALQNFAKSLLDVAD 208

Query: 222 NLGRASAVVKDSFSKIDASTDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINE 281
           NLGRAS+V  ++FSKID S+D+   V LLKTLL+GVEMTEKQL +V KKFGVEKFDP NE
Sbjct: 209 NLGRASSVATENFSKIDTSSDSAEVVKLLKTLLQGVEMTEKQLVEVLKKFGVEKFDPTNE 268

Query: 282 PFDPHKHYAVFQLPDASKPPGTVAAVLKAGYVLYDRVIRPAEVGVTIA 329
           PFDPH+H A+FQ+PD SKPPGTVAAVLKAGY+LYDRVIRPAEVGVT A
Sbjct: 269 PFDPHRHNAIFQIPDGSKPPGTVAAVLKAGYMLYDRVIRPAEVGVTHA 316


>Glyma18g10120.1 
          Length = 290

 Score =  267 bits (682), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/300 (50%), Positives = 191/300 (63%), Gaps = 48/300 (16%)

Query: 35  FSNQIDSLISEHSKQFVPGQVSLFHHSALSSSPFQRFGFTSSASPETNEKEEGSTAENNG 94
            SN   SL+     + +P Q + F +S+L+S    RFGF+S+AS E   +E         
Sbjct: 34  LSNNFHSLLHPSPNKVIPVQTN-FLNSSLTS----RFGFSSTASHEHASEE--------- 79

Query: 95  ASRNADAKPSNKTEDS-ASEESEKSGCNSESQPTMSQSVKRRRSGTKRTAFXXXXXXXXX 153
                 AK S+++E + A++++++SG  SE   +    +K                    
Sbjct: 80  ------AKVSDQSEQAEAADQTKESGVESECDLSRDDLIK-------------------- 113

Query: 154 XXXXXXXXXXXXXXXXXXXXXXXXXMQDKVLRTYAEMENVMERTKREAENSKKFAVQNFA 213
                                    MQDKVLRTYAEMENVM+RT+REAENSKKFA+QNFA
Sbjct: 114 -------LVAEKEQLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFA 166

Query: 214 KSLLDVADNLGRASAVVKDSFSKIDASTDATGAVPLLKTLLEGVEMTEKQLADVFKKFGV 273
           KSLLDVADNLGRAS+VVKD+FSKI++  +++ A  LLKTLLEGVEMTEKQLA+V KKFGV
Sbjct: 167 KSLLDVADNLGRASSVVKDNFSKIESPEESSEAAQLLKTLLEGVEMTEKQLAEVLKKFGV 226

Query: 274 EKFDPINEPFDPHKHYAVFQLPDASKPPGTVAAVLKAGYVLYDRVIRPAEVGVTIAVDND 333
           EKFDP NEPFDPH H A+FQ+PDASK PGTV  VLKAGY LYDRV+RPAEVGVT  V+++
Sbjct: 227 EKFDPTNEPFDPHMHNAIFQIPDASKAPGTVGVVLKAGYKLYDRVLRPAEVGVTQEVEDN 286


>Glyma08g43430.1 
          Length = 289

 Score =  260 bits (664), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 121/155 (78%), Positives = 141/155 (90%)

Query: 179 MQDKVLRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVKDSFSKID 238
           MQDKVLRTYAEMENVM+RT+REAENSKKFA+QNFAKSLLDVADNLGRAS+VVK+SFSKI+
Sbjct: 135 MQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIE 194

Query: 239 ASTDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDAS 298
           +  +++ A  LLKTLL+GVEMTEKQLA+V KKFGV+KFDP NEPFDPH H A+FQ+PDAS
Sbjct: 195 SPEESSEAAELLKTLLKGVEMTEKQLAEVLKKFGVKKFDPTNEPFDPHMHNAIFQIPDAS 254

Query: 299 KPPGTVAAVLKAGYVLYDRVIRPAEVGVTIAVDND 333
           K PGTV  VLKAGY+LYDRV+RPAEVGVT  V+++
Sbjct: 255 KAPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVEDN 289


>Glyma18g39460.1 
          Length = 184

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 67/92 (72%), Gaps = 5/92 (5%)

Query: 180 QDKVLRTYAEMENVMERTKREAENSKKFAV-----QNFAKSLLDVADNLGRASAVVKDSF 234
           +D +++   E E +++   +E E  +++ +     +NFAKSLLDV DNLGRAS+VVKDSF
Sbjct: 93  RDDLIKLVVEKEQLLKLKHKEIEKMQRWRMSWIGQENFAKSLLDVDDNLGRASSVVKDSF 152

Query: 235 SKIDASTDATGAVPLLKTLLEGVEMTEKQLAD 266
           SKI++  +++ A  LLKTLLEGVEM EKQLA+
Sbjct: 153 SKIESLEESSEAAQLLKTLLEGVEMIEKQLAE 184


>Glyma03g00840.1 
          Length = 335

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 19/151 (12%)

Query: 180 QDKVLRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVK---DSFSK 236
           +D++LR  A+ +N  +RT+R+  +    A     +SLL V DN  RA   +K   +   K
Sbjct: 164 KDRILRISADFDNFRKRTERDRLSLVTNAQGEVVESLLPVLDNFDRAKTQIKVETEGEEK 223

Query: 237 IDASTDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPD 296
           I+ S  +                  KQ  ++    GVE  + +  PFDP  H A+ +   
Sbjct: 224 INNSYQSIY----------------KQFIEILNSLGVEPVETVGTPFDPLLHEAIMREDS 267

Query: 297 ASKPPGTVAAVLKAGYVLYDRVIRPAEVGVT 327
                G +    + G+ L +R++RP+ V V+
Sbjct: 268 DEFEDGIIIQEFRKGFKLGERLLRPSMVKVS 298


>Glyma06g11310.1 
          Length = 335

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 13/149 (8%)

Query: 184 LRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVKDSFSKIDASTDA 243
           LR  A+ +N  +RT +E  N +  A Q   + LL + DN  R    +K       A+T+ 
Sbjct: 177 LRLQADFDNFRKRTDKERLNIQSDAQQQVIEKLLLMVDNFERTQQQIK-------AATEK 229

Query: 244 TGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDASKPPGT 303
              + +        +   KQ  +V +   V     + +PF+P +H AV +        G 
Sbjct: 230 EKKIGV------SYQGIYKQFVEVLRNHNVSVVATVGKPFNPLQHEAVAREESTEFKKGI 283

Query: 304 VAAVLKAGYVLYDRVIRPAEVGVTIAVDN 332
           +    + G++L DRV+RPA V V++   N
Sbjct: 284 IIKESRRGFLLRDRVLRPALVKVSLGPGN 312