Jatropha Genome Database

JcCB0028241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0028241.10 + phase: 0 
         (250 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g05980.1                                                       306   2e-83
Glyma13g07490.1                                                       303   9e-83
Glyma18g51600.1                                                       298   5e-81
Glyma08g28750.1                                                       296   9e-81
Glyma02g11020.1                                                       295   3e-80
Glyma01g22160.1                                                       294   6e-80

>Glyma19g05980.1 
          Length = 257

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 156/236 (66%), Positives = 180/236 (76%), Gaps = 8/236 (3%)

Query: 17  LSNKTSPTITKSLRLPSMPANPSLSFSSKTSIFNNRI-NNTFSVP-KRSFSCKSQASDDS 74
           L+  TS TIT    LP   AN   SF SKT   N    ++  S+P  +SF+C+SQA   S
Sbjct: 28  LNTSTSSTIT---LLPFTSAN---SFLSKTLKLNTSSPHSHLSLPLNKSFTCRSQAEPSS 81

Query: 75  TPSKFQELHVYEINERDRGSPAYLRLSQKEVNSLGDLVPFSNKLYTGDLQKRIGITAGIC 134
             +K QEL VYEINERDRGSPAYLRLSQK VNSLGDLVPFSNKLY+G LQKR+GITAGIC
Sbjct: 82  DSAKVQELSVYEINERDRGSPAYLRLSQKTVNSLGDLVPFSNKLYSGCLQKRVGITAGIC 141

Query: 135 ILIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSYLAVTGGTGIFEGVSGQVKL 194
           +LI++K+EKKGD YEAIYSFYFGDYGHI+VQG+YLTYED+YLAVTGG+GIFEG  GQVKL
Sbjct: 142 VLIQNKSEKKGDMYEAIYSFYFGDYGHISVQGSYLTYEDTYLAVTGGSGIFEGAYGQVKL 201

Query: 195 RQLIFPFKLFYTFYLKGIKDLPEELVGKXXXXXXXXXXXXXXKACQPHAALVNFTD 250
            Q++FPFKLFYTFYLKGIKDLP+EL+ K              KAC+PHA +  FTD
Sbjct: 202 HQIVFPFKLFYTFYLKGIKDLPQELLSKPVEPSPSVEPSPSAKACEPHAVIAGFTD 257


>Glyma13g07490.1 
          Length = 253

 Score =  303 bits (777), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 141/194 (72%), Positives = 162/194 (83%)

Query: 57  FSVPKRSFSCKSQASDDSTPSKFQELHVYEINERDRGSPAYLRLSQKEVNSLGDLVPFSN 116
            S+P +SF+C+SQA   S  +K QEL VYEINERDRGSPAYLRLSQK VNSLGDLVPFSN
Sbjct: 60  LSLPHKSFTCRSQAEPSSDSAKVQELSVYEINERDRGSPAYLRLSQKTVNSLGDLVPFSN 119

Query: 117 KLYTGDLQKRIGITAGICILIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSYL 176
           KLY+G LQKR+GITAGIC+LI++KAEKKGDRYEAIYSFYFGDYGHI+VQG+YLTYED+YL
Sbjct: 120 KLYSGCLQKRVGITAGICVLIQNKAEKKGDRYEAIYSFYFGDYGHISVQGSYLTYEDTYL 179

Query: 177 AVTGGTGIFEGVSGQVKLRQLIFPFKLFYTFYLKGIKDLPEELVGKXXXXXXXXXXXXXX 236
           AVTGG+GIFEG  GQVKL Q++FPFKLFYTFYLKGIKDLP+EL+ +              
Sbjct: 180 AVTGGSGIFEGAYGQVKLHQIVFPFKLFYTFYLKGIKDLPQELLSQPVEPSPAIEPSPSA 239

Query: 237 KACQPHAALVNFTD 250
           KAC+PHA +  FTD
Sbjct: 240 KACEPHAVIAGFTD 253


>Glyma18g51600.1 
          Length = 255

 Score =  298 bits (762), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 149/224 (66%), Positives = 172/224 (76%), Gaps = 9/224 (4%)

Query: 35  PANPSLSFSSKTSIF--NNRINNTF------SVPKRSFSCKSQASDDSTPSKFQELHVYE 86
           P  P L F+S       N ++N+T       SVPK+SF+C+SQA    +  K QEL VYE
Sbjct: 33  PTKPFLPFTSPNHSLTKNLKLNSTLPHFCLSSVPKKSFTCRSQAEPVDS-EKVQELSVYE 91

Query: 87  INERDRGSPAYLRLSQKEVNSLGDLVPFSNKLYTGDLQKRIGITAGICILIEHKAEKKGD 146
           INERDRGSP YLRLS K VNSLGDLVPFSNKLYTGDLQKRIGIT+GICILI++KAEKKGD
Sbjct: 92  INERDRGSPVYLRLSYKSVNSLGDLVPFSNKLYTGDLQKRIGITSGICILIQNKAEKKGD 151

Query: 147 RYEAIYSFYFGDYGHIAVQGAYLTYEDSYLAVTGGTGIFEGVSGQVKLRQLIFPFKLFYT 206
           RYEAI+SFYFGDYGHIAVQG YLTYED+YLAVTGG+GIFEGV GQVKLRQ+++PFK+ YT
Sbjct: 152 RYEAIFSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVKGQVKLRQIVYPFKILYT 211

Query: 207 FYLKGIKDLPEELVGKXXXXXXXXXXXXXXKACQPHAALVNFTD 250
           FYLKGIKDLP+EL+ K              KA +P+A +  FTD
Sbjct: 212 FYLKGIKDLPQELLVKTVEPIPSVEPSPAAKALEPNATIAGFTD 255


>Glyma08g28750.1 
          Length = 257

 Score =  296 bits (759), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 153/235 (65%), Positives = 178/235 (75%), Gaps = 15/235 (6%)

Query: 22  SPTITKSLRLPSMPANPSLSFSSKTSIFNNRINNTF------SVPKRSFSCKSQASDDST 75
           +P+ITK   LP   +N SL+        N ++N+T       SVPK+SF+C+SQA    +
Sbjct: 32  TPSITKPF-LPFTSSNHSLTE-------NLKLNSTLPHFCLSSVPKKSFTCRSQAEPVDS 83

Query: 76  PSKFQELHVYEINERDRGSPAYLRLSQKEVNSLGDLVPFSNKLYTGDLQKRIGITAGICI 135
             K QEL VYEINERDRGSP YLRLS K VNSLGDLVPFSNKLYTGDLQKRIGIT+GICI
Sbjct: 84  -EKVQELTVYEINERDRGSPVYLRLSYKSVNSLGDLVPFSNKLYTGDLQKRIGITSGICI 142

Query: 136 LIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSYLAVTGGTGIFEGVSGQVKLR 195
           LI++KAEKKGDRYEAI+SFYFGDYGHIAVQG YLTYEDSYLAVTGG+GIFEGV GQVKL 
Sbjct: 143 LIQNKAEKKGDRYEAIFSFYFGDYGHIAVQGPYLTYEDSYLAVTGGSGIFEGVKGQVKLH 202

Query: 196 QLIFPFKLFYTFYLKGIKDLPEELVGKXXXXXXXXXXXXXXKACQPHAALVNFTD 250
           Q+++PFK+ YTFYLKGIKDLP+EL+ K              KA +P+A +  FTD
Sbjct: 203 QIVYPFKILYTFYLKGIKDLPQELLVKTVEPIPSVEPSPAAKALEPNATIAGFTD 257


>Glyma02g11020.1 
          Length = 255

 Score =  295 bits (756), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 149/250 (59%), Positives = 182/250 (72%), Gaps = 12/250 (4%)

Query: 1   MACTTSPLKTAAYFARLSNKTSPTITKSLRLPSMPANPSLSFSSKTSIFNNRINNTFSVP 60
           ++C+ SPL T         ++ PT  K+L+     A P +S S +++  N      F   
Sbjct: 18  LSCSISPLSTQKQVGSSLFQSFPT--KTLKFS---ATPQVSTSRRST--NKTTTTAFF-- 68

Query: 61  KRSFSCKSQASDDSTPSKFQELHVYEINERDRGSPAYLRLSQKEVNSLGDLVPFSNKLYT 120
              F+ + Q  D S P+K QEL VYEINERDRGSPAYL+LSQK+VNSLGDLVPFSNK+Y+
Sbjct: 69  ---FNNQKQHQDSSQPTKVQELFVYEINERDRGSPAYLKLSQKQVNSLGDLVPFSNKIYS 125

Query: 121 GDLQKRIGITAGICILIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSYLAVTG 180
           GDLQKR+GITAG+C+LI+H+ EKKGDRYEAIYSFYFGDYGHI+VQGAYLTY+D+YLAV+G
Sbjct: 126 GDLQKRLGITAGLCVLIQHEPEKKGDRYEAIYSFYFGDYGHISVQGAYLTYQDTYLAVSG 185

Query: 181 GTGIFEGVSGQVKLRQLIFPFKLFYTFYLKGIKDLPEELVGKXXXXXXXXXXXXXXKACQ 240
           G+GIFEGV GQVKL QL+FPFKLFYTFYLKG+ DLP EL+GK               A +
Sbjct: 186 GSGIFEGVYGQVKLHQLVFPFKLFYTFYLKGVPDLPPELLGKPVEPSPSVEPSPAAMATE 245

Query: 241 PHAALVNFTD 250
           PHA L NFT+
Sbjct: 246 PHACLPNFTN 255


>Glyma01g22160.1 
          Length = 255

 Score =  294 bits (752), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 149/249 (59%), Positives = 181/249 (72%), Gaps = 12/249 (4%)

Query: 2   ACTTSPLKTAAYFARLSNKTSPTITKSLRLPSMPANPSLSFSSKTSIFNNRINNTFSVPK 61
           +C+ SPL+T         ++ PT  K+L+     A P +S S +++  N      F    
Sbjct: 19  SCSISPLQTQKQVGSSLFQSFPT--KTLKFS---ATPQVSTSRRST--NKTTTTAFF--- 68

Query: 62  RSFSCKSQASDDSTPSKFQELHVYEINERDRGSPAYLRLSQKEVNSLGDLVPFSNKLYTG 121
             F+ + Q  D S P+K QEL VYEINERDRGSPAYLRLSQK VNSLGDLVPFSNK+Y+G
Sbjct: 69  --FNNQKQHQDSSQPAKVQELFVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKIYSG 126

Query: 122 DLQKRIGITAGICILIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSYLAVTGG 181
           DLQKR+GITAG+C+LI+H+ EKKGDRYEAIYSFYFG+YGHI+VQGAYLT++D+YLAVTGG
Sbjct: 127 DLQKRLGITAGLCVLIQHEPEKKGDRYEAIYSFYFGNYGHISVQGAYLTFQDTYLAVTGG 186

Query: 182 TGIFEGVSGQVKLRQLIFPFKLFYTFYLKGIKDLPEELVGKXXXXXXXXXXXXXXKACQP 241
           +GIFEG SGQVKL QL+FPFKLFYTFYLKG+ DLP EL+GK               A +P
Sbjct: 187 SGIFEGASGQVKLHQLVFPFKLFYTFYLKGVPDLPPELLGKPVEPSPSVEPSPAAMATEP 246

Query: 242 HAALVNFTD 250
           HA L NFT+
Sbjct: 247 HACLPNFTN 255