Jatropha Genome Database

JcCB0027861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027861.10 - phase: 0 /pseudo/partial
         (399 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g04950.1                                                       456   e-128
Glyma12g04950.2                                                       456   e-128
Glyma11g12800.1                                                       455   e-128
Glyma11g12800.2                                                       455   e-128
Glyma14g22220.1                                                        61   2e-09

>Glyma12g04950.1 
          Length = 433

 Score =  456 bits (1174), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/364 (62%), Positives = 256/364 (70%), Gaps = 39/364 (10%)

Query: 41  SGHXXXXXXXXXXXXXXXXXXTECGVDFDEDPSAMVIDHKSYAVSKTEGDHTLIAADSFI 100
           SGH                  TECGVDFDEDP+A+V+DH +YAVS TEGDHTLIA+D FI
Sbjct: 104 SGHDLIVAADSNASDLIREIATECGVDFDEDPAAVVVDHSAYAVSATEGDHTLIASDDFI 163

Query: 101 ESDVILGKTKIEAPVLFKGIAHSINAANGLALKVLXXXXXXXXXXXXXXXXXXXXXXXXA 160
           +SDVI G  KIEAPVLF+GI HS+N  N L LKVL                        +
Sbjct: 164 KSDVIFGSKKIEAPVLFQGIGHSLNPTNSLVLKVLSASPSAFSANPKSKVTSPPSLTGTS 223

Query: 161 ISLVSVVQARNNARILITGSLDMFSNRFFKSGVQKAESTTKYEKSGNEQFVTELSKWIFH 220
           ISLVS++QARNNARILI+GSL +FSNRFF+SGVQKA S TK+EKSGNEQF+ ELSKWIFH
Sbjct: 224 ISLVSIIQARNNARILISGSLSLFSNRFFRSGVQKAGSPTKHEKSGNEQFLNELSKWIFH 283

Query: 221 ERGHLKAVNLGHHKVGETDEPAIYRIKDDL-----VYEWSGKSWEPYVANDVQVQFYMMS 275
           ERGHLKAVN+ HHKVGE +EPAIYRI D+L     VYEWSG +WEPYVA+DVQVQFYMMS
Sbjct: 284 ERGHLKAVNVQHHKVGEANEPAIYRINDNLEYSVEVYEWSGTAWEPYVADDVQVQFYMMS 343

Query: 276 PYVLKTLSTDQKGLYHTSFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPFRHNEYER 335
           PYVLKTLSTD KG Y TSFKVPDVYGVFQFKVEY++LGYTSLSLSKQIPVRPFRHNEYER
Sbjct: 344 PYVLKTLSTDGKGRYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYER 403

Query: 336 FITTAYPYYGASFATVLSHSLVKIKLLLMFVDVGGLVCALAKHFLLLLQMAGFFIFSFVY 395
           FI  AYPYYGASF+                                   M GFFIF+ V+
Sbjct: 404 FIPAAYPYYGASFS----------------------------------MMVGFFIFTAVH 429

Query: 396 LYNK 399
           LY+K
Sbjct: 430 LYSK 433


>Glyma12g04950.2 
          Length = 428

 Score =  456 bits (1174), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/330 (67%), Positives = 249/330 (75%), Gaps = 11/330 (3%)

Query: 41  SGHXXXXXXXXXXXXXXXXXXTECGVDFDEDPSAMVIDHKSYAVSKTEGDHTLIAADSFI 100
           SGH                  TECGVDFDEDP+A+V+DH +YAVS TEGDHTLIA+D FI
Sbjct: 104 SGHDLIVAADSNASDLIREIATECGVDFDEDPAAVVVDHSAYAVSATEGDHTLIASDDFI 163

Query: 101 ESDVILGKTKIEAPVLFKGIAHSINAANGLALKVLXXXXXXXXXXXXXXXXXXXXXXXXA 160
           +SDVI G  KIEAPVLF+GI HS+N  N L LKVL                        +
Sbjct: 164 KSDVIFGSKKIEAPVLFQGIGHSLNPTNSLVLKVLSASPSAFSANPKSKVTSPPSLTGTS 223

Query: 161 ISLVSVVQARNNARILITGSLDMFSNRFFKSGVQKAESTTKYEKSGNEQFVTELSKWIFH 220
           ISLVS++QARNNARILI+GSL +FSNRFF+SGVQKA S TK+EKSGNEQF+ ELSKWIFH
Sbjct: 224 ISLVSIIQARNNARILISGSLSLFSNRFFRSGVQKAGSPTKHEKSGNEQFLNELSKWIFH 283

Query: 221 ERGHLKAVNLGHHKVGETDEPAIYRIKDDL-----VYEWSGKSWEPYVANDVQVQFYMMS 275
           ERGHLKAVN+ HHKVGE +EPAIYRI D+L     VYEWSG +WEPYVA+DVQVQFYMMS
Sbjct: 284 ERGHLKAVNVQHHKVGEANEPAIYRINDNLEYSVEVYEWSGTAWEPYVADDVQVQFYMMS 343

Query: 276 PYVLKTLSTDQKGLYHTSFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPFRHNEYER 335
           PYVLKTLSTD KG Y TSFKVPDVYGVFQFKVEY++LGYTSLSLSKQIPVRPFRHNEYER
Sbjct: 344 PYVLKTLSTDGKGRYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYER 403

Query: 336 FITTAYPYYGASFATVLSHSLVKIKLLLMF 365
           FI  AYPYYGASF      S+V+I   L F
Sbjct: 404 FIPAAYPYYGASF------SMVRISFPLSF 427


>Glyma11g12800.1 
          Length = 412

 Score =  455 bits (1171), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/364 (63%), Positives = 256/364 (70%), Gaps = 39/364 (10%)

Query: 41  SGHXXXXXXXXXXXXXXXXXXTECGVDFDEDPSAMVIDHKSYAVSKTEGDHTLIAADSFI 100
           SGH                  TECGVDFDEDP+A+V+DH  YAVS TEGDHTLIA+D FI
Sbjct: 70  SGHDLIVAADSNASDLIREIATECGVDFDEDPAAVVVDHSGYAVSATEGDHTLIASDDFI 129

Query: 101 ESDVILGKTKIEAPVLFKGIAHSINAANGLALKVLXXXXXXXXXXXXXXXXXXXXXXXXA 160
           +SDVILG  KIEAPVLF+GI HS+N  N L LKVL                        +
Sbjct: 130 KSDVILGSKKIEAPVLFQGIGHSLNPTNSLVLKVLSASPSAFSANPKSKLTSPPSLTGTS 189

Query: 161 ISLVSVVQARNNARILITGSLDMFSNRFFKSGVQKAESTTKYEKSGNEQFVTELSKWIFH 220
           ISLVSV+QARNNARILI+GSL +FSNRFF SGVQKA S TK+EKSGNEQF+ ELSKWIFH
Sbjct: 190 ISLVSVIQARNNARILISGSLSLFSNRFFTSGVQKAGSPTKHEKSGNEQFLNELSKWIFH 249

Query: 221 ERGHLKAVNLGHHKVGETDEPAIYRIKDDL-----VYEWSGKSWEPYVANDVQVQFYMMS 275
           ERGHLKAV++ HHKVGE +EPAIYRI D+L     VYEWSG +WEPYVA+DVQVQFYMMS
Sbjct: 250 ERGHLKAVHVQHHKVGEANEPAIYRINDNLEYSVEVYEWSGTTWEPYVADDVQVQFYMMS 309

Query: 276 PYVLKTLSTDQKGLYHTSFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPFRHNEYER 335
           PYVLKTLSTD KG Y TSFKVPDVYGVFQFKVEY++LGYTSLSLSKQIPVRPFRHNEYER
Sbjct: 310 PYVLKTLSTDGKGHYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYER 369

Query: 336 FITTAYPYYGASFATVLSHSLVKIKLLLMFVDVGGLVCALAKHFLLLLQMAGFFIFSFVY 395
           FI  AYPYYGA+F+                                   MAGFFIF+ V+
Sbjct: 370 FIPAAYPYYGAAFS----------------------------------MMAGFFIFTAVH 395

Query: 396 LYNK 399
           LY+K
Sbjct: 396 LYSK 399


>Glyma11g12800.2 
          Length = 399

 Score =  455 bits (1171), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/364 (63%), Positives = 256/364 (70%), Gaps = 39/364 (10%)

Query: 41  SGHXXXXXXXXXXXXXXXXXXTECGVDFDEDPSAMVIDHKSYAVSKTEGDHTLIAADSFI 100
           SGH                  TECGVDFDEDP+A+V+DH  YAVS TEGDHTLIA+D FI
Sbjct: 70  SGHDLIVAADSNASDLIREIATECGVDFDEDPAAVVVDHSGYAVSATEGDHTLIASDDFI 129

Query: 101 ESDVILGKTKIEAPVLFKGIAHSINAANGLALKVLXXXXXXXXXXXXXXXXXXXXXXXXA 160
           +SDVILG  KIEAPVLF+GI HS+N  N L LKVL                        +
Sbjct: 130 KSDVILGSKKIEAPVLFQGIGHSLNPTNSLVLKVLSASPSAFSANPKSKLTSPPSLTGTS 189

Query: 161 ISLVSVVQARNNARILITGSLDMFSNRFFKSGVQKAESTTKYEKSGNEQFVTELSKWIFH 220
           ISLVSV+QARNNARILI+GSL +FSNRFF SGVQKA S TK+EKSGNEQF+ ELSKWIFH
Sbjct: 190 ISLVSVIQARNNARILISGSLSLFSNRFFTSGVQKAGSPTKHEKSGNEQFLNELSKWIFH 249

Query: 221 ERGHLKAVNLGHHKVGETDEPAIYRIKDDL-----VYEWSGKSWEPYVANDVQVQFYMMS 275
           ERGHLKAV++ HHKVGE +EPAIYRI D+L     VYEWSG +WEPYVA+DVQVQFYMMS
Sbjct: 250 ERGHLKAVHVQHHKVGEANEPAIYRINDNLEYSVEVYEWSGTTWEPYVADDVQVQFYMMS 309

Query: 276 PYVLKTLSTDQKGLYHTSFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPFRHNEYER 335
           PYVLKTLSTD KG Y TSFKVPDVYGVFQFKVEY++LGYTSLSLSKQIPVRPFRHNEYER
Sbjct: 310 PYVLKTLSTDGKGHYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYER 369

Query: 336 FITTAYPYYGASFATVLSHSLVKIKLLLMFVDVGGLVCALAKHFLLLLQMAGFFIFSFVY 395
           FI  AYPYYGA+F+                                   MAGFFIF+ V+
Sbjct: 370 FIPAAYPYYGAAFS----------------------------------MMAGFFIFTAVH 395

Query: 396 LYNK 399
           LY+K
Sbjct: 396 LYSK 399


>Glyma14g22220.1 
          Length = 123

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/47 (55%), Positives = 36/47 (76%)

Query: 70  EDPSAMVIDHKSYAVSKTEGDHTLIAADSFIESDVILGKTKIEAPVL 116
           +DP+A+V+DH  YAVS TEGDHTLIA+D FI  +++  +   +APVL
Sbjct: 45  QDPAAVVVDHSGYAVSATEGDHTLIASDDFININLLFSRYMQQAPVL 91