Jatropha Genome Database

JcCB0027191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027191.10 - phase: 0 
         (258 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g11020.1                                                       287   7e-78
Glyma01g22160.1                                                       281   5e-76
Glyma13g07490.1                                                       248   6e-66
Glyma19g05980.1                                                       247   8e-66
Glyma18g51600.1                                                       243   2e-64
Glyma08g28750.1                                                       239   3e-63

>Glyma02g11020.1 
          Length = 255

 Score =  287 bits (735), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 159/259 (61%), Positives = 178/259 (68%), Gaps = 7/259 (2%)

Query: 1   MAFTSSLTAISSFKLTNPTSHFLPSDRSLKQQG--LFHQQNQSLSTQNFKFSIPQHFSTR 58
           MA  SSL  ISSFKL++ +    P   + KQ G  LF    QS  T+  KFS     ST 
Sbjct: 1   MASMSSLKMISSFKLSHLSCSISPLS-TQKQVGSSLF----QSFPTKTLKFSATPQVSTS 55

Query: 59  RCSPKSIVTTAFFSKLCSESPKRKPAGKVQQLNVYEINERDRDSPAILKLSKKPELALGD 118
           R S     TTAFF     +        KVQ+L VYEINERDR SPA LKLS+K   +LGD
Sbjct: 56  RRSTNKTTTTAFFFNNQKQHQDSSQPTKVQELFVYEINERDRGSPAYLKLSQKQVNSLGD 115

Query: 119 LVPFTNKLYSGDLQKRFGITAGLCVLIQHVPEKNGDRYEANYSFYFGDYGHISVQGAYLT 178
           LVPF+NK+YSGDLQKR GITAGLCVLIQH PEK GDRYEA YSFYFGDYGHISVQGAYLT
Sbjct: 116 LVPFSNKIYSGDLQKRLGITAGLCVLIQHEPEKKGDRYEAIYSFYFGDYGHISVQGAYLT 175

Query: 179 YQDTFLAVTGGSGIFEGVYGQVKLQQIVFPYKLFYTFYLKGIPDLPAELLGXXXXXXXXX 238
           YQDT+LAV+GGSGIFEGVYGQVKL Q+VFP+KLFYTFYLKG+PDLP ELLG         
Sbjct: 176 YQDTYLAVSGGSGIFEGVYGQVKLHQLVFPFKLFYTFYLKGVPDLPPELLGKPVEPSPSV 235

Query: 239 XXXXXXXXXQPNATILNFT 257
                    +P+A + NFT
Sbjct: 236 EPSPAAMATEPHACLPNFT 254


>Glyma01g22160.1 
          Length = 255

 Score =  281 bits (719), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 155/260 (59%), Positives = 181/260 (69%), Gaps = 9/260 (3%)

Query: 1   MAFTSSLTAISSFKLTNPTSHFLPSDRSLKQQG--LFHQQNQSLSTQNFKFS-IPQHFST 57
           MA   SL  ISS KL+  +    P  ++ KQ G  LF    QS  T+  KFS  PQ  ++
Sbjct: 1   MASMGSLKMISSLKLSRSSCSISPL-QTQKQVGSSLF----QSFPTKTLKFSATPQVSTS 55

Query: 58  RRCSPKSIVTTAFFSKLCSESPKRKPAGKVQQLNVYEINERDRDSPAILKLSKKPELALG 117
           RR + K+  T  FF+         +PA KVQ+L VYEINERDR SPA L+LS+KP  +LG
Sbjct: 56  RRSTNKTTTTAFFFNNQKQHQDSSQPA-KVQELFVYEINERDRGSPAYLRLSQKPVNSLG 114

Query: 118 DLVPFTNKLYSGDLQKRFGITAGLCVLIQHVPEKNGDRYEANYSFYFGDYGHISVQGAYL 177
           DLVPF+NK+YSGDLQKR GITAGLCVLIQH PEK GDRYEA YSFYFG+YGHISVQGAYL
Sbjct: 115 DLVPFSNKIYSGDLQKRLGITAGLCVLIQHEPEKKGDRYEAIYSFYFGNYGHISVQGAYL 174

Query: 178 TYQDTFLAVTGGSGIFEGVYGQVKLQQIVFPYKLFYTFYLKGIPDLPAELLGXXXXXXXX 237
           T+QDT+LAVTGGSGIFEG  GQVKL Q+VFP+KLFYTFYLKG+PDLP ELLG        
Sbjct: 175 TFQDTYLAVTGGSGIFEGASGQVKLHQLVFPFKLFYTFYLKGVPDLPPELLGKPVEPSPS 234

Query: 238 XXXXXXXXXXQPNATILNFT 257
                     +P+A + NFT
Sbjct: 235 VEPSPAAMATEPHACLPNFT 254


>Glyma13g07490.1 
          Length = 253

 Score =  248 bits (632), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 128/209 (61%), Positives = 149/209 (71%), Gaps = 1/209 (0%)

Query: 50  SIPQHFSTRRCSPKSIVTTAFFSKLC-SESPKRKPAGKVQQLNVYEINERDRDSPAILKL 108
           S+P+       SP   ++    S  C S++     + KVQ+L+VYEINERDR SPA L+L
Sbjct: 44  SLPRTLKLNTSSPHPHLSLPHKSFTCRSQAEPSSDSAKVQELSVYEINERDRGSPAYLRL 103

Query: 109 SKKPELALGDLVPFTNKLYSGDLQKRFGITAGLCVLIQHVPEKNGDRYEANYSFYFGDYG 168
           S+K   +LGDLVPF+NKLYSG LQKR GITAG+CVLIQ+  EK GDRYEA YSFYFGDYG
Sbjct: 104 SQKTVNSLGDLVPFSNKLYSGCLQKRVGITAGICVLIQNKAEKKGDRYEAIYSFYFGDYG 163

Query: 169 HISVQGAYLTYQDTFLAVTGGSGIFEGVYGQVKLQQIVFPYKLFYTFYLKGIPDLPAELL 228
           HISVQG+YLTY+DT+LAVTGGSGIFEG YGQVKL QIVFP+KLFYTFYLKGI DLP ELL
Sbjct: 164 HISVQGSYLTYEDTYLAVTGGSGIFEGAYGQVKLHQIVFPFKLFYTFYLKGIKDLPQELL 223

Query: 229 GXXXXXXXXXXXXXXXXXXQPNATILNFT 257
                              +P+A I  FT
Sbjct: 224 SQPVEPSPAIEPSPSAKACEPHAVIAGFT 252


>Glyma19g05980.1 
          Length = 257

 Score =  247 bits (631), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 138/182 (75%)

Query: 76  SESPKRKPAGKVQQLNVYEINERDRDSPAILKLSKKPELALGDLVPFTNKLYSGDLQKRF 135
           S++     + KVQ+L+VYEINERDR SPA L+LS+K   +LGDLVPF+NKLYSG LQKR 
Sbjct: 75  SQAEPSSDSAKVQELSVYEINERDRGSPAYLRLSQKTVNSLGDLVPFSNKLYSGCLQKRV 134

Query: 136 GITAGLCVLIQHVPEKNGDRYEANYSFYFGDYGHISVQGAYLTYQDTFLAVTGGSGIFEG 195
           GITAG+CVLIQ+  EK GD YEA YSFYFGDYGHISVQG+YLTY+DT+LAVTGGSGIFEG
Sbjct: 135 GITAGICVLIQNKSEKKGDMYEAIYSFYFGDYGHISVQGSYLTYEDTYLAVTGGSGIFEG 194

Query: 196 VYGQVKLQQIVFPYKLFYTFYLKGIPDLPAELLGXXXXXXXXXXXXXXXXXXQPNATILN 255
            YGQVKL QIVFP+KLFYTFYLKGI DLP ELL                   +P+A I  
Sbjct: 195 AYGQVKLHQIVFPFKLFYTFYLKGIKDLPQELLSKPVEPSPSVEPSPSAKACEPHAVIAG 254

Query: 256 FT 257
           FT
Sbjct: 255 FT 256


>Glyma18g51600.1 
          Length = 255

 Score =  243 bits (620), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/244 (55%), Positives = 158/244 (64%), Gaps = 12/244 (4%)

Query: 16  TNPTSHFLPSDRSLKQQGLFHQQNQSLSTQNFKF-SIPQHFSTRRCSPKSIVTTAFFSKL 74
           T PTS F PS    K    F   N SL T+N K  S   HF       KS          
Sbjct: 23  TKPTSFFTPSPT--KPFLPFTSPNHSL-TKNLKLNSTLPHFCLSSVPKKSFT-------- 71

Query: 75  CSESPKRKPAGKVQQLNVYEINERDRDSPAILKLSKKPELALGDLVPFTNKLYSGDLQKR 134
           C    +   + KVQ+L+VYEINERDR SP  L+LS K   +LGDLVPF+NKLY+GDLQKR
Sbjct: 72  CRSQAEPVDSEKVQELSVYEINERDRGSPVYLRLSYKSVNSLGDLVPFSNKLYTGDLQKR 131

Query: 135 FGITAGLCVLIQHVPEKNGDRYEANYSFYFGDYGHISVQGAYLTYQDTFLAVTGGSGIFE 194
            GIT+G+C+LIQ+  EK GDRYEA +SFYFGDYGHI+VQG YLTY+DT+LAVTGGSGIFE
Sbjct: 132 IGITSGICILIQNKAEKKGDRYEAIFSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFE 191

Query: 195 GVYGQVKLQQIVFPYKLFYTFYLKGIPDLPAELLGXXXXXXXXXXXXXXXXXXQPNATIL 254
           GV GQVKL+QIV+P+K+ YTFYLKGI DLP ELL                   +PNATI 
Sbjct: 192 GVKGQVKLRQIVYPFKILYTFYLKGIKDLPQELLVKTVEPIPSVEPSPAAKALEPNATIA 251

Query: 255 NFTQ 258
            FT 
Sbjct: 252 GFTD 255


>Glyma08g28750.1 
          Length = 257

 Score =  239 bits (609), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 127/225 (56%), Positives = 148/225 (65%), Gaps = 10/225 (4%)

Query: 35  FHQQNQSLSTQNFKF-SIPQHFSTRRCSPKSIVTTAFFSKLCSESPKRKPAGKVQQLNVY 93
           F   N SL T+N K  S   HF       KS          C    +   + KVQ+L VY
Sbjct: 42  FTSSNHSL-TENLKLNSTLPHFCLSSVPKKSFT--------CRSQAEPVDSEKVQELTVY 92

Query: 94  EINERDRDSPAILKLSKKPELALGDLVPFTNKLYSGDLQKRFGITAGLCVLIQHVPEKNG 153
           EINERDR SP  L+LS K   +LGDLVPF+NKLY+GDLQKR GIT+G+C+LIQ+  EK G
Sbjct: 93  EINERDRGSPVYLRLSYKSVNSLGDLVPFSNKLYTGDLQKRIGITSGICILIQNKAEKKG 152

Query: 154 DRYEANYSFYFGDYGHISVQGAYLTYQDTFLAVTGGSGIFEGVYGQVKLQQIVFPYKLFY 213
           DRYEA +SFYFGDYGHI+VQG YLTY+D++LAVTGGSGIFEGV GQVKL QIV+P+K+ Y
Sbjct: 153 DRYEAIFSFYFGDYGHIAVQGPYLTYEDSYLAVTGGSGIFEGVKGQVKLHQIVYPFKILY 212

Query: 214 TFYLKGIPDLPAELLGXXXXXXXXXXXXXXXXXXQPNATILNFTQ 258
           TFYLKGI DLP ELL                   +PNATI  FT 
Sbjct: 213 TFYLKGIKDLPQELLVKTVEPIPSVEPSPAAKALEPNATIAGFTD 257