Jatropha Genome Database

JcCB0027181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027181.10 + phase: 0 /partial
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g30650.1                                                       203   3e-53
Glyma07g11580.1                                                       192   5e-50
Glyma05g33790.2                                                       190   2e-49
Glyma05g33790.1                                                       190   3e-49
Glyma09g30650.2                                                        62   1e-10

>Glyma09g30650.1 
          Length = 490

 Score =  203 bits (517), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 98/124 (79%), Positives = 113/124 (91%)

Query: 1   MEHSVDLTVEAMMLDSKASDLDKEERPEVLSMLPSYEGKSVLEFGAGIGRFTGEIAQNAG 60
           +EH+ DL+VE+MMLDS ASDLDKEERPEVLS+LP YEGKSV+E GAGIGRFT E+A+ AG
Sbjct: 16  IEHTTDLSVESMMLDSNASDLDKEERPEVLSLLPPYEGKSVVELGAGIGRFTVELAKKAG 75

Query: 61  QLVALDFIDSVIKKNESINGHYKNVKFICADVTSQDLKFSEGSVDLIFSNWLLMYLSDKE 120
           QL+A+DFI+S IKKNESINGH+KNVKF+CADVTS +L  SEGSVDLIFSNWLLMYLSDKE
Sbjct: 76  QLLAVDFIESAIKKNESINGHHKNVKFMCADVTSPNLYISEGSVDLIFSNWLLMYLSDKE 135

Query: 121 VKIL 124
           V+ L
Sbjct: 136 VENL 139


>Glyma07g11580.1 
          Length = 463

 Score =  192 bits (489), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 92/113 (81%), Positives = 105/113 (92%)

Query: 12  MMLDSKASDLDKEERPEVLSMLPSYEGKSVLEFGAGIGRFTGEIAQNAGQLVALDFIDSV 71
           MMLDS ASDLDKEERPEVLS+LP+YEGKSV+E GAGIGRFTGE+A+ AGQL+A+DFI+S 
Sbjct: 1   MMLDSNASDLDKEERPEVLSLLPAYEGKSVVELGAGIGRFTGELAKKAGQLLAVDFIESA 60

Query: 72  IKKNESINGHYKNVKFICADVTSQDLKFSEGSVDLIFSNWLLMYLSDKEVKIL 124
           IKKNESINGH+KNVKF+CADVTS +L  SEGSVDL+FSNWLLMYLSDKEV+ L
Sbjct: 61  IKKNESINGHHKNVKFMCADVTSPNLHISEGSVDLMFSNWLLMYLSDKEVENL 113


>Glyma05g33790.2 
          Length = 470

 Score =  190 bits (483), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 91/126 (72%), Positives = 111/126 (88%), Gaps = 2/126 (1%)

Query: 1   MEHSVDLTVEAMMLDSKASDLDKEERPEVLSMLPSYEGKSVLEFGAGIGRFTGEIAQNAG 60
           ++HS DL+VEAMMLDSKA+ LDKEERPEVLS+LP +EGKSV+E GAGIGRFTGE+A  AG
Sbjct: 12  LQHSADLSVEAMMLDSKAAHLDKEERPEVLSLLPPFEGKSVIELGAGIGRFTGELALKAG 71

Query: 61  QLVALDFIDSVIKKNESINGHYKNVKFICADVTSQDL--KFSEGSVDLIFSNWLLMYLSD 118
           QL+A+DFID+ IKKNE+INGH+ +VKF+CADVTS ++    SEGSVD++FSNWLLMYLSD
Sbjct: 72  QLLAVDFIDTAIKKNETINGHHNHVKFLCADVTSPNMSNNVSEGSVDVVFSNWLLMYLSD 131

Query: 119 KEVKIL 124
            EV+ L
Sbjct: 132 IEVEKL 137


>Glyma05g33790.1 
          Length = 488

 Score =  190 bits (483), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 91/126 (72%), Positives = 111/126 (88%), Gaps = 2/126 (1%)

Query: 1   MEHSVDLTVEAMMLDSKASDLDKEERPEVLSMLPSYEGKSVLEFGAGIGRFTGEIAQNAG 60
           ++HS DL+VEAMMLDSKA+ LDKEERPEVLS+LP +EGKSV+E GAGIGRFTGE+A  AG
Sbjct: 12  LQHSADLSVEAMMLDSKAAHLDKEERPEVLSLLPPFEGKSVIELGAGIGRFTGELALKAG 71

Query: 61  QLVALDFIDSVIKKNESINGHYKNVKFICADVTSQDL--KFSEGSVDLIFSNWLLMYLSD 118
           QL+A+DFID+ IKKNE+INGH+ +VKF+CADVTS ++    SEGSVD++FSNWLLMYLSD
Sbjct: 72  QLLAVDFIDTAIKKNETINGHHNHVKFLCADVTSPNMSNNVSEGSVDVVFSNWLLMYLSD 131

Query: 119 KEVKIL 124
            EV+ L
Sbjct: 132 IEVEKL 137


>Glyma09g30650.2 
          Length = 388

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/37 (81%), Positives = 33/37 (89%)

Query: 88  ICADVTSQDLKFSEGSVDLIFSNWLLMYLSDKEVKIL 124
           +CADVTS +L  SEGSVDLIFSNWLLMYLSDKEV+ L
Sbjct: 1   MCADVTSPNLYISEGSVDLIFSNWLLMYLSDKEVENL 37