Jatropha Genome Database

JcCB0025751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0025751.10 - phase: 0 /partial
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g38800.2                                                       349   1e-96
Glyma06g16110.2                                                       343   8e-95
Glyma06g16110.1                                                       343   8e-95
Glyma03g39720.1                                                        75   4e-14

>Glyma04g38800.2 
          Length = 432

 Score =  349 bits (895), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 163/191 (85%), Positives = 170/191 (89%)

Query: 1   RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPLLRI 60
           RDAATAPNVGDRVPYVIIKAAKGAKAYE+SEDPIYVLENNIPIDPQYYLENQISKP++RI
Sbjct: 242 RDAATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQISKPIMRI 301

Query: 61  FEPILKNASKELLHGXXXXXXXXXXXXXXXXMKFAKKQLSCIGCKALISNSDRTLCSHCK 120
           FEPILKNASKELLHG                +KFAKKQL+CIGCKAL+ N   TLCSHCK
Sbjct: 302 FEPILKNASKELLHGSHTRSISISTPANSGILKFAKKQLTCIGCKALLGNGHHTLCSHCK 361

Query: 121 GREAELYCKTVSQVSELELLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA 180
           GREAELYCKTVSQVSELE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA
Sbjct: 362 GREAELYCKTVSQVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA 421

Query: 181 EAKRQLDRWNF 191
           EAK QLDRWNF
Sbjct: 422 EAKLQLDRWNF 432


>Glyma06g16110.2 
          Length = 1085

 Score =  343 bits (879), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 161/191 (84%), Positives = 167/191 (87%)

Query: 1    RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPLLRI 60
            RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDP YYLENQISKP+LRI
Sbjct: 895  RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPHYYLENQISKPILRI 954

Query: 61   FEPILKNASKELLHGXXXXXXXXXXXXXXXXMKFAKKQLSCIGCKALISNSDRTLCSHCK 120
            FEPILKNASKELLHG                ++FAKKQL+CIGCKAL+     TLCSHCK
Sbjct: 955  FEPILKNASKELLHGSHTRSISISTPSNSGILRFAKKQLTCIGCKALLGKGYHTLCSHCK 1014

Query: 121  GREAELYCKTVSQVSELELLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA 180
            GREAELYCKTVSQVSELE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDM 
Sbjct: 1015 GREAELYCKTVSQVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMG 1074

Query: 181  EAKRQLDRWNF 191
            EAK QLDRWNF
Sbjct: 1075 EAKLQLDRWNF 1085


>Glyma06g16110.1 
          Length = 1085

 Score =  343 bits (879), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 161/191 (84%), Positives = 167/191 (87%)

Query: 1    RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPLLRI 60
            RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDP YYLENQISKP+LRI
Sbjct: 895  RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPHYYLENQISKPILRI 954

Query: 61   FEPILKNASKELLHGXXXXXXXXXXXXXXXXMKFAKKQLSCIGCKALISNSDRTLCSHCK 120
            FEPILKNASKELLHG                ++FAKKQL+CIGCKAL+     TLCSHCK
Sbjct: 955  FEPILKNASKELLHGSHTRSISISTPSNSGILRFAKKQLTCIGCKALLGKGYHTLCSHCK 1014

Query: 121  GREAELYCKTVSQVSELELLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA 180
            GREAELYCKTVSQVSELE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDM 
Sbjct: 1015 GREAELYCKTVSQVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMG 1074

Query: 181  EAKRQLDRWNF 191
            EAK QLDRWNF
Sbjct: 1075 EAKLQLDRWNF 1085


>Glyma03g39720.1 
          Length = 1934

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 80/191 (41%), Gaps = 11/191 (5%)

Query: 2    DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDPQYYLENQISKPLLR 59
            D    P   +R+PYV+I    GA+  +   DP+ VL  + P  I+  YY+  QI   L R
Sbjct: 1727 DPRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQR 1786

Query: 60   IFEPI---LKNASKELLHGXXXXXXXXXXXXXXXXMKFAKKQLS--CIGCKALISNSDRT 114
            +F  +   L +   E+                    +     LS  C+ C  L+  S R 
Sbjct: 1787 VFGLVGADLNHWFSEMPRPTREASAKHTLTTNFHQTRIDYYYLSKHCVLCDRLVQASAR- 1845

Query: 115  LCSHCKGREAELYCKTVSQVSELELLFGRLWTQCQECQGS---LHQDVLCTSRDCPIFYR 171
            LC+ C   E       +S+ S+LE     L   C  C G    L   V CTS  C +FY 
Sbjct: 1846 LCNQCSENEVAAATAVISKTSKLEQEMQHLVAVCHHCGGGDRLLENGVKCTSISCLVFYE 1905

Query: 172  RKKAQKDMAEA 182
            R+K QK++  A
Sbjct: 1906 RRKVQKELLAA 1916