Jatropha Genome Database

JcCB0022951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0022951.10 + phase: 0 /pseudo
         (370 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g19250.1                                                       210   2e-54
Glyma08g06790.1                                                       203   2e-52
Glyma07g30460.1                                                       202   4e-52
Glyma14g33930.1                                                       184   1e-46
Glyma15g22090.1                                                       102   8e-22
Glyma15g05750.1                                                        87   3e-17
Glyma08g39780.1                                                        83   5e-16

>Glyma08g19250.1 
          Length = 449

 Score =  210 bits (534), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 98/141 (69%), Positives = 112/141 (79%)

Query: 228 VPKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVVNYYKENAK 287
           VP+ LLYSNGFPV+ DFNRI+CTCFNGASNI QAGGLACLS EG +A+ ++V+YY ENA+
Sbjct: 303 VPEELLYSNGFPVVHDFNRIMCTCFNGASNIAQAGGLACLSPEGLRAMQTLVDYYMENAR 362

Query: 288 ILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXXXXYI 347
           ILV+A  SLGL VYGGKNAPY+WVHFPG  SW+VF EILEKT I+TVP          YI
Sbjct: 363 ILVDALTSLGLTVYGGKNAPYVWVHFPGSKSWNVFAEILEKTHIITVPGSGFGPGGEEYI 422

Query: 348 RISAFGHRKSILEASARLTKL 368
           RISAFG R SI+EAS RL  L
Sbjct: 423 RISAFGQRDSIIEASKRLKYL 443



 Score =  198 bits (503), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/147 (61%), Positives = 113/147 (76%)

Query: 1   MESLKSGYLFPEISIREFEHMQKRPHARLIRLGIGDTTQPIPEIITSAMAEHAYALSTLQ 60
           ME L+ GYLFPEI   E  H++  PHA +I LGIGDTTQP+P I+TS+M +  + LST  
Sbjct: 49  MEKLQHGYLFPEIERHELMHLEMYPHANVIDLGIGDTTQPLPTIVTSSMVDFVHGLSTAT 108

Query: 61  GYKGYGAEQGNMDLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQD 120
           GYKGYG EQG   LR AI+  FYKD+GIK  E+FVSDGAQ DI+RLQ+L+G N+ +AVQD
Sbjct: 109 GYKGYGPEQGEKALRKAISVTFYKDLGIKPSEVFVSDGAQCDITRLQLLMGPNLKIAVQD 168

Query: 121 PSFPGYIDSSVIIGQAGKYEEETGNFQ 147
           PSFP YIDSSVIIGQAGK+ ++ G ++
Sbjct: 169 PSFPAYIDSSVIIGQAGKFVDKAGKYK 195


>Glyma08g06790.1 
          Length = 458

 Score =  203 bits (517), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 112/142 (78%)

Query: 228 VPKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVVNYYKENAK 287
           VPK+LL+S+GFPV KDFNRIVCTCFNGASNI QAGGLACLS EG KA+  V+ +YKEN  
Sbjct: 316 VPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMRDVIGFYKENTN 375

Query: 288 ILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXXXXYI 347
           I++E F SLG KVYGGK+APY+WVHFPG +SWDVF EILEKT +VT P          +I
Sbjct: 376 IIMETFDSLGFKVYGGKDAPYVWVHFPGRSSWDVFAEILEKTHVVTTPGSGFGPGGEGFI 435

Query: 348 RISAFGHRKSILEASARLTKLF 369
           R+SAFGHR+++LEA  R  +L+
Sbjct: 436 RVSAFGHRENVLEACRRFKQLY 457



 Score =  189 bits (480), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 90/149 (60%), Positives = 115/149 (77%), Gaps = 7/149 (4%)

Query: 1   MESLKSGYLFPEISIREFEHMQKRPHARLIRLGIGDTTQPIPEIITSAMAEHAYALSTLQ 60
           M  L++GYLFPEI+ R   H+ K P A++I LGIGDTT+PIPE+IT AM++ ++ALST++
Sbjct: 62  MGKLQAGYLFPEIARRRSAHLLKYPDAKVISLGIGDTTEPIPEVITDAMSKRSHALSTIE 121

Query: 61  GYKGYGAEQGNMDLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQD 120
           GY GYGAEQG   LR A+A  FY D+GI+  +IFVSDGA+ DISRLQ++ GSNV +AVQD
Sbjct: 122 GYSGYGAEQGEKPLRRALASTFYSDLGIEEDDIFVSDGAKCDISRLQIVFGSNVKMAVQD 181

Query: 121 PSFPGYIDSSVIIGQAGKYEEETGNFQKN 149
           PS+P Y+DSSVI+GQ       TG FQKN
Sbjct: 182 PSYPAYVDSSVIMGQ-------TGLFQKN 203


>Glyma07g30460.1 
          Length = 458

 Score =  202 bits (515), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 112/142 (78%)

Query: 228 VPKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVVNYYKENAK 287
           VPK+LL+S+GFPV KDFNRIVCTCFNGASNI QAGGLACLS +G KA+  V+ +YKEN  
Sbjct: 316 VPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPDGLKAMRDVIGFYKENTD 375

Query: 288 ILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXXXXYI 347
           I++E F SLG KVYGGK+APY+WVHFPG +SWDVF EILEKT +VT P          +I
Sbjct: 376 IIMETFDSLGFKVYGGKDAPYVWVHFPGRSSWDVFAEILEKTHVVTTPGSGFGPGGEGFI 435

Query: 348 RISAFGHRKSILEASARLTKLF 369
           R+SAFGHR+++LEA  R  +L+
Sbjct: 436 RVSAFGHRENVLEACRRFKQLY 457



 Score =  191 bits (485), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/146 (59%), Positives = 115/146 (78%)

Query: 1   MESLKSGYLFPEISIREFEHMQKRPHARLIRLGIGDTTQPIPEIITSAMAEHAYALSTLQ 60
           M  L++GYLFPEI+ R   H+ K P A++I LGIGDTT+PIPE+IT AM++ ++ALST++
Sbjct: 62  MGKLQAGYLFPEIARRRSAHLLKYPDAKVISLGIGDTTEPIPEVITDAMSKRSHALSTIE 121

Query: 61  GYKGYGAEQGNMDLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQD 120
           GY GYGAEQG   LR A+A  FY D+GI+  +IFVSDGA+ DISRLQ++ GSNV +AVQD
Sbjct: 122 GYSGYGAEQGEKPLRRALASTFYSDLGIEEDDIFVSDGAKCDISRLQIVFGSNVKMAVQD 181

Query: 121 PSFPGYIDSSVIIGQAGKYEEETGNF 146
           PS+P Y+DSSVI+GQ G Y+++   F
Sbjct: 182 PSYPAYVDSSVIMGQTGLYQKDVEKF 207


>Glyma14g33930.1 
          Length = 356

 Score =  184 bits (467), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 108/142 (76%), Gaps = 4/142 (2%)

Query: 228 VPKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVVNYYKENAK 287
           VP+ LLY++G+P+IKD++RIVCTCFNGASNIVQAGGLACLS +G++        +K    
Sbjct: 219 VPEELLYADGYPIIKDYDRIVCTCFNGASNIVQAGGLACLSPQGFQ--QPFTTTWKMRKY 276

Query: 288 ILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXXXXYI 347
           +L+   +SLGLKVYGGKN PY+WVHFPG+ SW+VFN+ILE+  IVTVP          YI
Sbjct: 277 LLIR--ESLGLKVYGGKNGPYVWVHFPGLRSWEVFNKILERAAIVTVPSIEFGPGGEGYI 334

Query: 348 RISAFGHRKSILEASARLTKLF 369
           R+SAFGHR+S+LEAS RL KL 
Sbjct: 335 RVSAFGHRESVLEASRRLRKLL 356



 Score =  171 bits (432), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/119 (68%), Positives = 100/119 (84%)

Query: 27  ARLIRLGIGDTTQPIPEIITSAMAEHAYALSTLQGYKGYGAEQGNMDLRMAIAERFYKDM 86
           ARLIRLGIGDTT+PIP+IITSAMA+ A ALST + YKGYG EQGN +L+ AIAE FY+D 
Sbjct: 1   ARLIRLGIGDTTEPIPDIITSAMAKQALALSTAECYKGYGPEQGNRELKRAIAETFYQDK 60

Query: 87  GIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQDPSFPGYIDSSVIIGQAGKYEEETGN 145
            +K  EIFVSDGAQ DISR+QMLL S++++AVQDP+FP YIDSSVI+G+AG ++  +G 
Sbjct: 61  QVKENEIFVSDGAQCDISRIQMLLDSSLSIAVQDPTFPAYIDSSVIVGRAGGFKAGSGK 119


>Glyma15g22090.1 
          Length = 244

 Score =  102 bits (254), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 71/112 (63%), Gaps = 3/112 (2%)

Query: 16  REFEHMQKRPHARLIRLGIGDTTQPIPEIITSAMA---EHAYALSTLQGYKGYGAEQGNM 72
           R   H+ K P A++I LGIGDT +PIP +IT+AM+   EH + +   + Y    +     
Sbjct: 4   RRSAHLLKYPDAKVISLGIGDTNKPIPVVITNAMSKLSEHKFVVHFEKFYWKMKSWLEPC 63

Query: 73  DLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQDPSFP 124
           +    +A  FY D+GIK   IFVSDGA+ DISRLQ++ GSNV + VQDPS+P
Sbjct: 64  NKIGELASTFYSDLGIKQDHIFVSDGAKCDISRLQIVFGSNVKMVVQDPSYP 115


>Glyma15g05750.1 
          Length = 303

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 56/94 (59%), Gaps = 21/94 (22%)

Query: 54  YALSTLQGYKGYGAEQGNMDLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSN 113
           + LST  GYKGYG EQG   LR AI+  FYKD                     Q+L+G N
Sbjct: 3   HGLSTATGYKGYGPEQGEKTLRKAISLAFYKD---------------------QLLMGPN 41

Query: 114 VTVAVQDPSFPGYIDSSVIIGQAGKYEEETGNFQ 147
           + +AVQDPSFP YIDSSVIIGQA K+ ++ G ++
Sbjct: 42  LKIAVQDPSFPAYIDSSVIIGQAAKFVDKAGKYK 75



 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 62/132 (46%), Gaps = 37/132 (28%)

Query: 230 KRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGG------LACLSNEGYKAVNSVVNYYK 283
           + +LYSNGFPV+ DFNRI+CTCFNGASNI QA           +     +A+ S+V++Y 
Sbjct: 185 EEILYSNGFPVVLDFNRIMCTCFNGASNITQAVPRFISKYCEIMFWRISQAMQSLVDHYM 244

Query: 284 ENAKILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXX 343
           ENA+ILV A  SL                               KT I+TVP        
Sbjct: 245 ENARILVGALTSL-------------------------------KTHIITVPGSGFGPGG 273

Query: 344 XXYIRISAFGHR 355
             YIRIS  G  
Sbjct: 274 EEYIRISVLGRE 285


>Glyma08g39780.1 
          Length = 214

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 36/51 (70%), Positives = 43/51 (84%)

Query: 229 PKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVV 279
           P+ LLY+NG+P+IKD++RIVCTCFNGASNIVQAGGLACLS  G    N V+
Sbjct: 163 PEELLYANGYPIIKDYDRIVCTCFNGASNIVQAGGLACLSPPGSSCCNFVL 213