Jatropha Genome Database

JcCB0022671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0022671.10 + phase: 2 /partial
         (423 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g04700.1                                                       412   e-115
Glyma15g04700.2                                                       382   e-106
Glyma13g40740.1                                                       342   3e-94

>Glyma15g04700.1 
          Length = 954

 Score =  412 bits (1058), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/416 (55%), Positives = 289/416 (69%), Gaps = 21/416 (5%)

Query: 15  LVRVFFNQLHSLISPADFEENQAQEIKFERSISLDKFSKLDINEHHQEAQSTVGYSP-LL 73
           L+RVFF +L SL +   F ENQ Q+ KF+ S+S DK SK ++NEH+QEAQS  G  P L 
Sbjct: 552 LLRVFFGELQSLFTSTGFGENQVQDSKFDESLSWDKLSKFNMNEHYQEAQSAGGCPPSLT 611

Query: 74  KKETSTLNNVSSNQKEEMSENSAFQE-EQLNFKNERMNRGDDAMKE----DKGKAGGTAS 128
            KE ++LN    N KE MSENSAF + +Q N + E  N+G    K+    DKG  G TAS
Sbjct: 612 GKEHASLNKKGGNFKEGMSENSAFPDMDQHNTRAEETNQGKGLNKQNQVDDKGIPGKTAS 671

Query: 129 AVSREMDRDFQNVETSGSDTSSTRGKNFVGQMGNGDFAKSSDLVKENGRQGVQEDGKVGT 188
             +REMD+D QNVETSGSD+SS +GKN V  M NG+ +KS++ +K   R  V+E+ +   
Sbjct: 672 GGAREMDKDAQNVETSGSDSSSAKGKNVVDNMDNGELSKSNERLK---RTAVEENPEDEK 728

Query: 189 IQFEEKPRKRKRTIMNDYQMSLIEKALVDEPDMQRNSASIQRWADKLSIHGSEVTFSQLK 248
           I+  ++ RKRKRTIMND Q+ LIE+AL DEPDMQRN+AS+Q WADKLS HGSEVT SQLK
Sbjct: 729 IELSQR-RKRKRTIMNDKQVMLIERALKDEPDMQRNAASLQSWADKLSGHGSEVTSSQLK 787

Query: 249 NWLNNRKARLARAGKDVRAPVEFDSAHSVKQ-GMSTHSHDSPESRGEDNAPSGARLVPST 307
           NWLNNRKARLAR  +DV+A    D+    KQ G    S+DSP S G+         V   
Sbjct: 788 NWLNNRKARLARTARDVKAAAGDDNPVPEKQRGPVPGSYDSPGSPGD---------VSHV 838

Query: 308 SRIGTSENAETSLAEFVGIGAAEFVQCKPGQYVVLVDKQGEEIGKAKVYQVQGKWYGKNL 367
           +RI + +N ++ LA FV IG+ EF  C  GQ VVLV  +G+EIG+ KV+QV GKWYGK+L
Sbjct: 839 ARIASGDN-KSELARFVDIGSPEFGHCNAGQNVVLVGVRGDEIGRGKVFQVHGKWYGKSL 897

Query: 368 EESETCVVDVTELKADRWVRLPYPSEATGTSFSEAETKLGVMRVLWDSNKIFMFRP 423
           EE    VVD++ELKAD+ +RLPYPSEATG +F+EAETKLGVMRVLW SN++F  RP
Sbjct: 898 EELSAHVVDISELKADKGMRLPYPSEATGNTFAEAETKLGVMRVLWGSNRVFALRP 953


>Glyma15g04700.2 
          Length = 931

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/416 (52%), Positives = 275/416 (66%), Gaps = 44/416 (10%)

Query: 15  LVRVFFNQLHSLISPADFEENQAQEIKFERSISLDKFSKLDINEHHQEAQSTVGYSP-LL 73
           L+RVFF +L SL +   F ENQ Q+ KF+ S+S DK SK ++NEH+QEAQS  G  P L 
Sbjct: 552 LLRVFFGELQSLFTSTGFGENQVQDSKFDESLSWDKLSKFNMNEHYQEAQSAGGCPPSLT 611

Query: 74  KKETSTLNNVSSNQKEEMSENSAFQE-EQLNFKNERMNRGDDAMKE----DKGKAGGTAS 128
            KE ++LN    N KE MSENSAF + +Q N + E  N+G    K+    DKG  G TAS
Sbjct: 612 GKEHASLNKKGGNFKEGMSENSAFPDMDQHNTRAEETNQGKGLNKQNQVDDKGIPGKTAS 671

Query: 129 AVSREMDRDFQNVETSGSDTSSTRGKNFVGQMGNGDFAKSSDLVKENGRQGVQEDGKVGT 188
             +REMD+D QNVETSGSD+SS +GKN V  M NG+ +KS++ +K   R  V+E+ +   
Sbjct: 672 GGAREMDKDAQNVETSGSDSSSAKGKNVVDNMDNGELSKSNERLK---RTAVEENPEDEK 728

Query: 189 IQFEEKPRKRKRTIMNDYQMSLIEKALVDEPDMQRNSASIQRWADKLSIHGSEVTFSQLK 248
           I+  ++ RKRKRTIMND Q+ LIE+AL DEPDMQRN+AS+Q WADKLS HGSEVT SQLK
Sbjct: 729 IELSQR-RKRKRTIMNDKQVMLIERALKDEPDMQRNAASLQSWADKLSGHGSEVTSSQLK 787

Query: 249 NWLNNRKARLARAGKDVRAPVEFDSAHSVKQ-GMSTHSHDSPESRGEDNAPSGARLVPST 307
           NWLNNRKARLAR  +DV+A    D+    KQ G    S+DSP S G+         V   
Sbjct: 788 NWLNNRKARLARTARDVKAAAGDDNPVPEKQRGPVPGSYDSPGSPGD---------VSHV 838

Query: 308 SRIGTSENAETSLAEFVGIGAAEFVQCKPGQYVVLVDKQGEEIGKAKVYQVQGKWYGKNL 367
           +RI +                        GQ VVLV  +G+EIG+ KV+QV GKWYGK+L
Sbjct: 839 ARIAS------------------------GQNVVLVGVRGDEIGRGKVFQVHGKWYGKSL 874

Query: 368 EESETCVVDVTELKADRWVRLPYPSEATGTSFSEAETKLGVMRVLWDSNKIFMFRP 423
           EE    VVD++ELKAD+ +RLPYPSEATG +F+EAETKLGVMRVLW SN++F  RP
Sbjct: 875 EELSAHVVDISELKADKGMRLPYPSEATGNTFAEAETKLGVMRVLWGSNRVFALRP 930


>Glyma13g40740.1 
          Length = 827

 Score =  342 bits (878), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 211/437 (48%), Positives = 267/437 (61%), Gaps = 71/437 (16%)

Query: 23  LHSLISPA--------DFEENQAQEIKFERSISLDKFSKLDINEHHQEAQSTVGYSPLLK 74
           LHSL+S A        + E+ Q    KFE S+  DK SK + NEH+Q+            
Sbjct: 425 LHSLLSHAESLIPNFLNVEDVQLLS-KFEESLYWDKLSKFNRNEHYQKG----------- 472

Query: 75  KETSTLNNVSSNQKEEMSENSAFQE-EQLNFKNERMNRGDDAMK----EDKGKAGGTASA 129
                      N KE MSENSAF + +Q N + E  N+G    +    +DKG AG TAS 
Sbjct: 473 ----------GNFKEGMSENSAFPDMDQHNTRAEDTNQGKGLNRLNQVDDKGIAGKTASG 522

Query: 130 VSREMDRDFQNVETSGSDTSSTRGKNFVGQMGNGDFAKSSDLVKENGRQGVQEDGKVGTI 189
            +REMD+D QNVETSGSD+SS +GKN V  M NG+ +KS++ +K   R  V+E+ +   I
Sbjct: 523 GAREMDKDAQNVETSGSDSSSAKGKNVVDNMDNGELSKSNERLK---RTAVEENPEDEKI 579

Query: 190 QFEEKPRKRKRTIMNDYQMSLIEKALVDEPDMQRNSASIQRWADKLSIHGSEVTFSQLKN 249
           +  ++ RKRKRTIMND Q+ LIE+AL DEPDMQRN+AS+Q WADKLS HGSEVT SQLKN
Sbjct: 580 ELSQR-RKRKRTIMNDKQVMLIERALKDEPDMQRNAASLQSWADKLSGHGSEVTSSQLKN 638

Query: 250 WL-------------------NNRKARLARAGKDVRAPVEFDSAHSVKQ-GMSTHSHDSP 289
           W                    NNRKARLAR  +DV+A    D+    KQ G    S+DSP
Sbjct: 639 WYASICSLSYSLLSCCLLLLLNNRKARLARTARDVKAAAGDDNPVPDKQRGPVPGSYDSP 698

Query: 290 ESRGEDNAPSGARLVPSTSRIGTSEN---AETSLAEFVGIGAAEFVQCKPGQYVVLVDKQ 346
            S G+         V   +RI + +N      +LA FV IG+ EF  C  GQYVVLV  +
Sbjct: 699 GSPGD---------VSHVARIASGDNKSEPSLALARFVDIGSPEFGHCNAGQYVVLVGVR 749

Query: 347 GEEIGKAKVYQVQGKWYGKNLEESETCVVDVTELKADRWVRLPYPSEATGTSFSEAETKL 406
            +EIG+ KV+QV GKWYGK+L+E    VVD++ELKAD+ +RLPYPSEATG +F+EAETKL
Sbjct: 750 QDEIGRGKVFQVHGKWYGKSLDELSAHVVDISELKADKGMRLPYPSEATGNTFAEAETKL 809

Query: 407 GVMRVLWDSNKIFMFRP 423
           GVMRVLW SN++F   P
Sbjct: 810 GVMRVLWGSNRVFALPP 826