Jatropha Genome Database
- JcCB0018351.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0018351.30 - phase: 2 /partial
(82 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g06550.1 84 3e-17
Glyma02g12490.1 82 2e-16
Glyma20g03410.1 79 1e-15
Glyma18g49830.1 78 2e-15
Glyma07g35380.1 75 2e-14
Glyma08g26230.1 74 3e-14
Glyma13g05720.1 53 7e-08
Glyma18g44030.1 52 2e-07
Glyma18g44030.2 52 2e-07
Glyma08g43770.1 51 3e-07
Glyma02g46690.1 51 3e-07
Glyma14g01980.1 51 3e-07
Glyma18g09040.1 51 3e-07
Glyma06g37100.1 50 4e-07
Glyma06g47880.1 49 1e-06
Glyma04g12830.1 49 1e-06
Glyma06g47880.2 49 1e-06
Glyma09g41670.1 49 1e-06
Glyma14g38010.1 48 2e-06
Glyma02g39870.1 48 2e-06
Glyma11g29720.1 46 9e-06
>Glyma01g06550.1
Length = 455
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDM--EKQD-NRRDLGSNNQ 68
++TDPKAVITTYEGKHNHD+PAAK + H+ ++ +++LK + EK + R +G N Q
Sbjct: 382 ASTDPKAVITTYEGKHNHDVPAAKNNSHTMASNTASQLKSHNTNPEKHNFGSRGMGGNEQ 441
Query: 69 QPIARLRLKEGQIT 82
QP+ARLRLKE QIT
Sbjct: 442 QPVARLRLKEEQIT 455
>Glyma02g12490.1
Length = 455
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDM--EKQD-NRRDLGSNNQ 68
++TDPKAVITTYEGKHNHD+PAAK + H+ ++ +++LK + EK + R +G N Q
Sbjct: 382 ASTDPKAVITTYEGKHNHDVPAAKTNSHTMASNTASQLKSHNTNPEKHNFGSRGMGGNEQ 441
Query: 69 QPIARLRLKEGQIT 82
QP+ARL+LKE QIT
Sbjct: 442 QPVARLQLKEEQIT 455
>Glyma20g03410.1
Length = 439
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQ-----DMEKQDNRRDLGSN 66
++ DPKAVITTYEGKHNHD+PAAK + H+ N+++++LK Q D++ + R + N
Sbjct: 364 ASMDPKAVITTYEGKHNHDVPAAKTNSHTLANNSASQLKAQKFAIPDVKHSSSSRGVTGN 423
Query: 67 NQQPIARLRLKEGQIT 82
Q+P+A LRLKE QIT
Sbjct: 424 EQRPVASLRLKEEQIT 439
>Glyma18g49830.1
Length = 520
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQDNR----RDLGSNN 67
++TDPKAVITTYEGKHNHD+PAA+ S H+T +SNS LK ++ + + +D G N+
Sbjct: 446 ASTDPKAVITTYEGKHNHDVPAARNSSHNTASSNSMPLKPHNVVPEKHPLLKDKDFGGND 505
Query: 68 QQPIARLRLKEGQI 81
Q+P+ LRLKE QI
Sbjct: 506 QRPV-HLRLKEEQI 518
>Glyma07g35380.1
Length = 340
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 8/90 (8%)
Query: 1 LAAKSVNMSKE---SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQ 57
A + N+ K ++ DPKAV+TTYEGKHNHD+P AK + H+ N+++++LK Q++
Sbjct: 251 CATQGCNVRKHVERASMDPKAVLTTYEGKHNHDVPVAKTNSHTLANNSASQLKAQNIAIP 310
Query: 58 DNRRDLGS-----NNQQPIARLRLKEGQIT 82
D++ S N Q+P+ LRLKE QIT
Sbjct: 311 DDKHSFSSRGVRGNEQRPLGSLRLKEEQIT 340
>Glyma08g26230.1
Length = 523
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQDNR----RDLGSNN 67
++ DPKAVITTYEGKHNHD+PAA+ S H+T +SNS LK ++ + + D GS +
Sbjct: 449 ASMDPKAVITTYEGKHNHDVPAARNSSHNTASSNSMPLKPHNVVPEKHPLLKDMDFGSTD 508
Query: 68 QQPIARLRLKEGQI 81
Q+P+ LRLKE QI
Sbjct: 509 QRPV-HLRLKEEQI 521
>Glyma13g05720.1
Length = 85
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQD--MEKQDNRR--DLGSNN 67
++ DPKAVITTYEGKHNHD+PA + H+ N LK +EK + D G+N+
Sbjct: 20 ASMDPKAVITTYEGKHNHDVPATRNRSHNIATYNLMPLKPHKVVLEKHPLLKGMDFGNND 79
Query: 68 QQ 69
Q+
Sbjct: 80 QR 81
>Glyma18g44030.1
Length = 541
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNS 46
+A D KAVITTYEGKHNHD+PAA+GS + +N NS
Sbjct: 410 AAHDIKAVITTYEGKHNHDVPAARGSGNYYMNRNS 444
>Glyma18g44030.2
Length = 407
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNS 46
+A D KAVITTYEGKHNHD+PAA+GS + +N NS
Sbjct: 276 AAHDIKAVITTYEGKHNHDVPAARGSGNYYMNRNS 310
>Glyma08g43770.1
Length = 596
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSA 47
DPKAVITTYEGKHNHD+P A+ S H SA
Sbjct: 459 DPKAVITTYEGKHNHDVPTARNSCHDMAGPASA 491
>Glyma02g46690.1
Length = 588
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIH 39
DPKAVITTYEGKHNHD+PAA+ S H
Sbjct: 450 DPKAVITTYEGKHNHDVPAARNSSH 474
>Glyma14g01980.1
Length = 585
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIH 39
DPKAVITTYEGKHNHD+PAA+ S H
Sbjct: 447 DPKAVITTYEGKHNHDVPAARNSSH 471
>Glyma18g09040.1
Length = 553
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSA 47
DPKAVITTYEGKHNHD+P A+ S H SA
Sbjct: 416 DPKAVITTYEGKHNHDVPTARNSCHDMAGPASA 448
>Glyma06g37100.1
Length = 178
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIH 39
DPKAVITTYEGKHNHD+PAA+ S H
Sbjct: 51 DPKAVITTYEGKHNHDVPAARNSSH 75
>Glyma06g47880.1
Length = 686
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQDNR 60
D K+VITTYEGKHNHD+PAA+ S H N+++A Q ++ +R
Sbjct: 542 DLKSVITTYEGKHNHDVPAARASSHVNANASNAVPGQASLQTHVHR 587
>Glyma04g12830.1
Length = 761
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQDNR 60
D K+VITTYEGKHNHD+PAA+ S H N+++A Q ++ +R
Sbjct: 583 DLKSVITTYEGKHNHDVPAARASSHVNANASNAVPGQASLQTHVHR 628
>Glyma06g47880.2
Length = 500
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQDNR 60
D K+VITTYEGKHNHD+PAA+ S H N+++A Q ++ +R
Sbjct: 304 DLKSVITTYEGKHNHDVPAARASSHVNANASNAVPGQASLQTHVHR 349
>Glyma09g41670.1
Length = 507
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 24/26 (92%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGS 37
+A D KAVITTYEGKHNHD+PAA+GS
Sbjct: 389 AAHDIKAVITTYEGKHNHDVPAARGS 414
>Glyma14g38010.1
Length = 586
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVN 43
D +AVITTYEGKHNHD+PAA+GS +VN
Sbjct: 459 DLRAVITTYEGKHNHDVPAARGSGSHSVN 487
>Glyma02g39870.1
Length = 580
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVN 43
D +AVITTYEGKHNHD+PAA+GS +VN
Sbjct: 451 DLRAVITTYEGKHNHDVPAARGSGSHSVN 479
>Glyma11g29720.1
Length = 548
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/23 (82%), Positives = 22/23 (95%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGS 37
D +AVITTYEGKHNHD+PAA+GS
Sbjct: 422 DLRAVITTYEGKHNHDVPAARGS 444