Jatropha Genome Database

JcCB0017941.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0017941.20 - phase: 0 
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g47730.1                                                       184   2e-47
Glyma14g00900.2                                                       181   2e-46
Glyma14g00900.1                                                       181   2e-46
Glyma08g25990.1                                                        74   3e-14
Glyma12g00280.1                                                        72   1e-13
Glyma04g14470.2                                                        62   9e-11
Glyma06g46620.2                                                        62   1e-10
Glyma06g46620.1                                                        62   1e-10
Glyma04g14470.1                                                        62   1e-10
Glyma03g24110.3                                                        55   2e-08
Glyma03g24110.2                                                        55   2e-08
Glyma03g24110.1                                                        55   2e-08
Glyma11g00790.1                                                        51   3e-07

>Glyma02g47730.1 
          Length = 114

 Score =  184 bits (468), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 88/102 (86%), Positives = 99/102 (97%)

Query: 14  TEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAAAAKIGKI 73
           T++LKPYVLKMHFTNKYVSAQVIH+PTATVA SASSQEKALRSS+E +RDVAAAAKIGKI
Sbjct: 13  TQFLKPYVLKMHFTNKYVSAQVIHTPTATVASSASSQEKALRSSLETSRDVAAAAKIGKI 72

Query: 74  LAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGVKLL 115
           LAERLL+KDIPAVSV LKREQKYHGKVKAV+D++R++GVKLL
Sbjct: 73  LAERLLLKDIPAVSVHLKREQKYHGKVKAVIDSIREAGVKLL 114


>Glyma14g00900.2 
          Length = 114

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/102 (85%), Positives = 99/102 (97%)

Query: 14  TEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAAAAKIGKI 73
           T++LKPYVLKM+FTNKYVSAQVIHSPTATVA SASSQEKALRSS+E +RDVAAAAKIGKI
Sbjct: 13  TQFLKPYVLKMNFTNKYVSAQVIHSPTATVASSASSQEKALRSSLETSRDVAAAAKIGKI 72

Query: 74  LAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGVKLL 115
           LAERLL+K+IPAVSV LKREQKYHGKVKAV+D++R++GVKLL
Sbjct: 73  LAERLLLKNIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 114


>Glyma14g00900.1 
          Length = 114

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/102 (85%), Positives = 99/102 (97%)

Query: 14  TEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAAAAKIGKI 73
           T++LKPYVLKM+FTNKYVSAQVIHSPTATVA SASSQEKALRSS+E +RDVAAAAKIGKI
Sbjct: 13  TQFLKPYVLKMNFTNKYVSAQVIHSPTATVASSASSQEKALRSSLETSRDVAAAAKIGKI 72

Query: 74  LAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGVKLL 115
           LAERLL+K+IPAVSV LKREQKYHGKVKAV+D++R++GVKLL
Sbjct: 73  LAERLLLKNIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 114


>Glyma08g25990.1 
          Length = 197

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 66/104 (63%)

Query: 9   WPPRVTEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAAAA 68
           W  R   Y++P++L + F+ +++ A+V+H  T+ V C A++  K LR+S+ +  D  A  
Sbjct: 91  WKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLPSLIDHNACR 150

Query: 69  KIGKILAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGV 112
            +G ++AER +  D+ AV+   +++++  G++  V+D ++++G+
Sbjct: 151 VVGNLIAERSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENGI 194


>Glyma12g00280.1 
          Length = 197

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 66/104 (63%)

Query: 9   WPPRVTEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAAAA 68
           W  R   Y++P++L + F+ +++ A+V+H  T+ V C A++  K LR+S+ +  D  A  
Sbjct: 91  WKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLPSLIDHNACR 150

Query: 69  KIGKILAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGV 112
            +G ++A+R +  D+ AV+   +++++  G++  V+D ++++G+
Sbjct: 151 VVGNLIAQRSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENGI 194


>Glyma04g14470.2 
          Length = 148

 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 59/108 (54%)

Query: 7   VKWPPRVTEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAA 66
           + +  R   Y++P+ L +  + ++VSA + H  T+     A +  K +++ + +  D+ A
Sbjct: 36  ISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 95

Query: 67  AAKIGKILAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGVKL 114
              IG+ILAER    D+   S   +   K+ GK++AVV ++ D+G+ +
Sbjct: 96  CIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDI 143


>Glyma06g46620.2 
          Length = 202

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 59/108 (54%)

Query: 7   VKWPPRVTEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAA 66
           + +  R   Y++P+ L +  + ++VSA + H  T+     A +  K +++ + +  D+ A
Sbjct: 90  ISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 149

Query: 67  AAKIGKILAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGVKL 114
              IG+ILAER    D+   S   +   K+ GK++AVV ++ D+G+ +
Sbjct: 150 CIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDI 197


>Glyma06g46620.1 
          Length = 202

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 59/108 (54%)

Query: 7   VKWPPRVTEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAA 66
           + +  R   Y++P+ L +  + ++VSA + H  T+     A +  K +++ + +  D+ A
Sbjct: 90  ISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 149

Query: 67  AAKIGKILAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGVKL 114
              IG+ILAER    D+   S   +   K+ GK++AVV ++ D+G+ +
Sbjct: 150 CIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDI 197


>Glyma04g14470.1 
          Length = 187

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 59/108 (54%)

Query: 7   VKWPPRVTEYLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAA 66
           + +  R   Y++P+ L +  + ++VSA + H  T+     A +  K +++ + +  D+ A
Sbjct: 75  ISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 134

Query: 67  AAKIGKILAERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGVKL 114
              IG+ILAER    D+   S   +   K+ GK++AVV ++ D+G+ +
Sbjct: 135 CIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDI 182


>Glyma03g24110.3 
          Length = 128

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 12/111 (10%)

Query: 17  LKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTR--DVAAAAKIGKIL 74
           +K YVL++  + KY++A V+      +  S+S+ E  ++ S+E  R  +  AAA +G++L
Sbjct: 4   MKRYVLRLFISLKYITANVVDRNNGRIVVSSSTAEHTIKESLECGRSCNAKAAAVVGEVL 63

Query: 75  AERLLVKDIP-----AVSVFLKREQKYHG-----KVKAVVDAVRDSGVKLL 115
           A RL V+ +       +   + +E    G     KV AVV+A++++GVKL+
Sbjct: 64  ARRLKVEGLNEGEGRGIHANITKEVGKKGFKNQTKVWAVVNALKNNGVKLI 114


>Glyma03g24110.2 
          Length = 128

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 12/111 (10%)

Query: 17  LKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTR--DVAAAAKIGKIL 74
           +K YVL++  + KY++A V+      +  S+S+ E  ++ S+E  R  +  AAA +G++L
Sbjct: 4   MKRYVLRLFISLKYITANVVDRNNGRIVVSSSTAEHTIKESLECGRSCNAKAAAVVGEVL 63

Query: 75  AERLLVKDIP-----AVSVFLKREQKYHG-----KVKAVVDAVRDSGVKLL 115
           A RL V+ +       +   + +E    G     KV AVV+A++++GVKL+
Sbjct: 64  ARRLKVEGLNEGEGRGIHANITKEVGKKGFKNQTKVWAVVNALKNNGVKLI 114


>Glyma03g24110.1 
          Length = 128

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 12/111 (10%)

Query: 17  LKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTR--DVAAAAKIGKIL 74
           +K YVL++  + KY++A V+      +  S+S+ E  ++ S+E  R  +  AAA +G++L
Sbjct: 4   MKRYVLRLFISLKYITANVVDRNNGRIVVSSSTAEHTIKESLECGRSCNAKAAAVVGEVL 63

Query: 75  AERLLVKDIP-----AVSVFLKREQKYHG-----KVKAVVDAVRDSGVKLL 115
           A RL V+ +       +   + +E    G     KV AVV+A++++GVKL+
Sbjct: 64  ARRLKVEGLNEGEGRGIHANITKEVGKKGFKNQTKVWAVVNALKNNGVKLI 114


>Glyma11g00790.1 
          Length = 272

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 53/99 (53%)

Query: 16  YLKPYVLKMHFTNKYVSAQVIHSPTATVACSASSQEKALRSSMENTRDVAAAAKIGKILA 75
           Y +P+ L +  +   V A V+H  T+ V   A S  K  +  + +T++    A +G ILA
Sbjct: 159 YHEPFCLDIFISKASVRACVVHRVTSKVVAVAHSISKDFKFDLASTKNKTTCAAVGAILA 218

Query: 76  ERLLVKDIPAVSVFLKREQKYHGKVKAVVDAVRDSGVKL 114
           +R L  DI  +    ++ ++  GK++ V+ ++ D+G+ +
Sbjct: 219 QRALADDIHDIVYTPRKGERVEGKLQIVLQSIIDNGINV 257