Jatropha Genome Database

JcCB0016411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0016411.10 - phase: 0 /partial
         (315 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g13830.1                                                       529   e-150
Glyma09g02870.1                                                       529   e-150
Glyma08g25670.2                                                       196   3e-50
Glyma18g08490.1                                                       106   3e-23

>Glyma15g13830.1 
          Length = 394

 Score =  529 bits (1362), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/282 (90%), Positives = 267/282 (94%)

Query: 34  KSNTRVSAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDS 93
           K  + VSAFLEIHDIAGLVRGAH+GQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDD+
Sbjct: 81  KPKSEVSAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDT 140

Query: 94  VDPVRDLEVIGAELRLKDLEFIERRIEDIEKSMKRSNDKQLKIEHEMCQKVKAWLEDGKD 153
           VDPVRDLEVI  ELRLKD+EF+ER+IEDIEKSMKRSNDKQLKIE E CQ+VKA LE+GKD
Sbjct: 141 VDPVRDLEVITEELRLKDIEFMERKIEDIEKSMKRSNDKQLKIELECCQRVKALLEEGKD 200

Query: 154 VRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGGETII 213
           +RLGDWKAADIEILN+FQLLTAKPVVYLVNM EKDYQRKKNKFLPKIHAWVQEHGGETII
Sbjct: 201 IRLGDWKAADIEILNSFQLLTAKPVVYLVNMTEKDYQRKKNKFLPKIHAWVQEHGGETII 260

Query: 214 PFSAAFERNLADMTPDEAAKYCEENKVQSALPKIIKTGFSAINLIYFFTAGPDEVKCWQI 273
           PFS A ERNLADM PDEAAKYCEENK QSAL KIIKTGFSAINLIYFFTAGPDEVKCWQI
Sbjct: 261 PFSCALERNLADMPPDEAAKYCEENKTQSALTKIIKTGFSAINLIYFFTAGPDEVKCWQI 320

Query: 274 RRQSKAPQAAGTIHSDFERGFICAEVMKFEDLKELGSESAVK 315
           RRQ+KAPQAAG IH+DFERGFICAEVMKFEDLKELGSESAVK
Sbjct: 321 RRQTKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAVK 362


>Glyma09g02870.1 
          Length = 394

 Score =  529 bits (1362), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/282 (90%), Positives = 267/282 (94%)

Query: 34  KSNTRVSAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDS 93
           K  + VSAFLEIHDIAGLVRGAH+GQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDD+
Sbjct: 81  KPKSEVSAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDT 140

Query: 94  VDPVRDLEVIGAELRLKDLEFIERRIEDIEKSMKRSNDKQLKIEHEMCQKVKAWLEDGKD 153
           VDPVRDLEVI  ELRLKD+EF+ER+IEDIEKSMKRSNDKQLKIE E CQ+VKA LE+GKD
Sbjct: 141 VDPVRDLEVITEELRLKDIEFMERKIEDIEKSMKRSNDKQLKIELECCQRVKALLEEGKD 200

Query: 154 VRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGGETII 213
           +RLGDWKAADIEILN+FQLLTAKPVVYLVNM EKDYQRKKNKFLPKIHAWVQEHGGETII
Sbjct: 201 IRLGDWKAADIEILNSFQLLTAKPVVYLVNMTEKDYQRKKNKFLPKIHAWVQEHGGETII 260

Query: 214 PFSAAFERNLADMTPDEAAKYCEENKVQSALPKIIKTGFSAINLIYFFTAGPDEVKCWQI 273
           PFS A ERNLADM PDEAAKYCEENK QSAL KIIKTGFSAINLIYFFTAGPDEVKCWQI
Sbjct: 261 PFSCALERNLADMPPDEAAKYCEENKTQSALTKIIKTGFSAINLIYFFTAGPDEVKCWQI 320

Query: 274 RRQSKAPQAAGTIHSDFERGFICAEVMKFEDLKELGSESAVK 315
           RRQ+KAPQAAG IH+DFERGFICAEVMKFEDLKELGSESAVK
Sbjct: 321 RRQTKAPQAAGAIHTDFERGFICAEVMKFEDLKELGSESAVK 362


>Glyma08g25670.2 
          Length = 420

 Score =  196 bits (498), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/287 (40%), Positives = 161/287 (56%), Gaps = 4/287 (1%)

Query: 32  IDKSNTRVSAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVD 91
           + KS   V A +E  DIAGLV+GA +G+GLGN FLSHIR VD I  V+R FED DI+HV+
Sbjct: 109 LSKSQRAVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDNDIVHVN 168

Query: 92  DSVDPVRDLEVIGAELRLKDLEFIERRIEDIEKSMKRSNDKQLKIEHE--MCQKVKAWLE 149
             VDP  D++VI  EL   DL+ IE+RI+ ++K  K  + ++LK E E    +K++  L 
Sbjct: 169 GKVDPKSDIDVINLELVFSDLDQIEKRIDKLKKG-KAKDSQKLKEEAEKSALEKIREALM 227

Query: 150 DGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGG 209
           DGK  R       + + +    LLT KPV+Y+ N+ E D     N    K    V     
Sbjct: 228 DGKPARSVTLTDFERDAVKHLCLLTMKPVIYVANVAESDLADPANNNYVKDVTNVVSELQ 287

Query: 210 ETIIPFSAAFERNLADMTPDEAAKYCEENKV-QSALPKIIKTGFSAINLIYFFTAGPDEV 268
             I+  SA  E  L ++  +E  +Y +   V +S L  +I+  +  + L  +FT+G  E 
Sbjct: 288 SRIVTISAQVEAELTELPVEERQEYLQSLGVSESGLGNLIRATYDLLGLRTYFTSGEKET 347

Query: 269 KCWQIRRQSKAPQAAGTIHSDFERGFICAEVMKFEDLKELGSESAVK 315
           K W I     APQAAG IHSDFE+GFI AE + +ED    GS SA +
Sbjct: 348 KAWTILAGMTAPQAAGVIHSDFEKGFIRAETVSYEDFVAAGSLSAAR 394


>Glyma18g08490.1 
          Length = 114

 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 58/63 (92%)

Query: 81  AFEDPDIIHVDDSVDPVRDLEVIGAELRLKDLEFIERRIEDIEKSMKRSNDKQLKIEHEM 140
           AFEDPDIIHVDD VDPVRDLEVI  ELRLKD++F+ER+I+DIEKSMKRSNDKQLKIE + 
Sbjct: 52  AFEDPDIIHVDDIVDPVRDLEVITEELRLKDIQFMERKIQDIEKSMKRSNDKQLKIELQC 111

Query: 141 CQK 143
           CQ+
Sbjct: 112 CQR 114