Jatropha Genome Database

JcCB0014891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0014891.10 - phase: 0 /partial
         (273 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g39600.2                                                       156   3e-38
Glyma01g39600.1                                                       151   6e-37
Glyma17g18480.1                                                       151   6e-37
Glyma11g05650.2                                                       139   4e-33
Glyma11g05650.1                                                       139   5e-33
Glyma05g20710.1                                                       138   7e-33
Glyma17g06450.1                                                        59   5e-09
Glyma14g10120.1                                                        57   1e-08
Glyma17g29190.1                                                        57   2e-08
Glyma13g00380.1                                                        57   2e-08
Glyma09g06980.1                                                        55   1e-07

>Glyma01g39600.2 
          Length = 320

 Score =  156 bits (394), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/293 (40%), Positives = 135/293 (46%), Gaps = 62/293 (21%)

Query: 1   MAVELMMSYRNENFISKMEESVVQEAASGLESVNKLIRLLSQKNQEKDQXXXXXXXXXXX 60
           MAVE MM YRN+ F    E++ V+EAASGLESV KLI+LLS   Q+              
Sbjct: 1   MAVEFMMGYRNDTF---AEDNAVREAASGLESVEKLIKLLSHTQQQ-------YQTTSKS 50

Query: 61  XMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAXXXXXXXXXXXXXXXXXXXX 120
            M+N+D D  AVADVAVSKFKKVISLLGRTRTGHARFRRA                    
Sbjct: 51  SMENIDTDYTAVADVAVSKFKKVISLLGRTRTGHARFRRA------------PVPVPVPV 98

Query: 121 XXXQILESKVYYATXXXXXXXXXXXXXXXYFSSVVIPNDNSNNNGVIS-------ERKES 173
                 E +VY AT                     IP    + + V         ERK+S
Sbjct: 99  ASPPPSEPRVYRATPLQQ-----------------IPPPTLHTHSVTDHSLIPKIERKDS 141

Query: 174 STTIXXXXXXXXXXXXXXXTGDTTDSKQLSSSS-----AFQI-------AGGKPPI-SSS 220
           S TI               T   TD+KQ  SSS     AFQI       + GKPP+ SSS
Sbjct: 142 SKTI---NFSYSNSFVSSLTAGDTDTKQPCSSSPSPATAFQITNLSQVSSAGKPPLSSSS 198

Query: 221 LKRKCSSETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAISLKLADIPPDDY 273
           LKRKCSSE L                            PAISLK+ADIPPDDY
Sbjct: 199 LKRKCSSENLGSAKCGSSSSRCHCSKKRKMRQKRVVRVPAISLKMADIPPDDY 251


>Glyma01g39600.1 
          Length = 321

 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 135/294 (45%), Gaps = 63/294 (21%)

Query: 1   MAVELMMSYRNENFISKMEESVVQEAASGLESVNKLIRLLSQKNQEKDQXXXXXXXXXXX 60
           MAVE MM YRN+ F    E++ V+EAASGLESV KLI+LLS   Q+              
Sbjct: 1   MAVEFMMGYRNDTF---AEDNAVREAASGLESVEKLIKLLSHTQQQ-------YQTTSKS 50

Query: 61  XMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAXXXXXXXXXXXXXXXXXXXX 120
            M+N+D D  AVADVAVSKFKKVISLLGRTRTGHARFRRA                    
Sbjct: 51  SMENIDTDYTAVADVAVSKFKKVISLLGRTRTGHARFRRA------------PVPVPVPV 98

Query: 121 XXXQILESKVYYATXXXXXXXXXXXXXXXYFSSVVIPNDNSNNNGVIS-------ERKES 173
                 E +VY AT                     IP    + + V         ERK+S
Sbjct: 99  ASPPPSEPRVYRATPLQQ-----------------IPPPTLHTHSVTDHSLIPKIERKDS 141

Query: 174 STTIXXXXXXXXXXXXXXXTGDTTDSKQLSSSS-----AFQI-------AGGKPPI-SSS 220
           S TI               T   TD+KQ  SSS     AFQI       + GKPP+ SSS
Sbjct: 142 SKTI---NFSYSNSFVSSLTAGDTDTKQPCSSSPSPATAFQITNLSQVSSAGKPPLSSSS 198

Query: 221 LKRKCSSETL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAISLKLADIPPDDY 273
           LKRKCSSE L                             PAISLK+ADIPPDDY
Sbjct: 199 LKRKCSSENLGSAKCGSSSSRCHCSKKSRKMRQKRVVRVPAISLKMADIPPDDY 252


>Glyma17g18480.1 
          Length = 332

 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/291 (39%), Positives = 131/291 (45%), Gaps = 46/291 (15%)

Query: 1   MAVELMMS--YRNEN---FISKMEESVVQEAASGLESVNKLIRLLSQKNQEKDQXXXXXX 55
           MAV+LM +   RN+N   F +K EE+ VQEAASGLESV KLIRLLSQ   +         
Sbjct: 1   MAVDLMTTGYTRNDNISSFTTKAEENAVQEAASGLESVEKLIRLLSQTQAQAQAHHQFNN 60

Query: 56  XXXXXXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAXXXXXXXXXXXXXXX 115
                    + MDCKAVADVAVSKF+KVISLLGRTRTGHARFRRA               
Sbjct: 61  NNSSSNEIAIAMDCKAVADVAVSKFQKVISLLGRTRTGHARFRRAPLPNQHQHTQPPS-- 118

Query: 116 XXXXXXXXQILESKVYYATXXXXXXXXXXXXXXXYFSSVVIPNDNSNNNGVISERKESST 175
                      E  V +AT                     IP    + N        SS 
Sbjct: 119 -----------EPPVLHATPLHQIPPPSLHQ---------IPKTEKHLND------SSSK 152

Query: 176 TIXXXXXXXXXXXXXXXTGDTTDSKQLS-----SSSAFQI-------AGGKPPI-SSSLK 222
           T+               TGD  D+KQ S     ++S FQI       + GKPP+ SSS K
Sbjct: 153 TLHFSYPSAVTSFVSSLTGDAADNKQPSPAATTTTSHFQITSLSHVSSAGKPPLSSSSFK 212

Query: 223 RKCSSETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAISLKLADIPPDDY 273
           RKCSSE L                            PAISLK+ADIPPDDY
Sbjct: 213 RKCSSENLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDY 263


>Glyma11g05650.2 
          Length = 272

 Score =  139 bits (349), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/293 (40%), Positives = 137/293 (46%), Gaps = 61/293 (20%)

Query: 1   MAVELMMSYRNENFISKMEESVVQEAASGLESVNKLIRLLSQKNQEKDQXXXXXXXXXXX 60
           MAV+LMM YRN NF    +E+ V+EAASGLESV KLI+LLSQ  Q+  Q           
Sbjct: 1   MAVDLMMGYRNHNF---AQENAVREAASGLESVEKLIKLLSQTQQQF-QTTSNSTSNSKS 56

Query: 61  XMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAXXXXXXXXXXXXXXXXXXXX 120
            M N+D D +AVADVAVSKFKKVISLLG +RTGHARF                       
Sbjct: 57  SMANIDTDYRAVADVAVSKFKKVISLLGSSRTGHARF-----------------RRAPVA 99

Query: 121 XXXQILESKVYYATXXXXXXXXXXXXXXXYFSSVVIPNDNSNNNGVIS--------ERKE 172
                 E +VY AT                     IP    + + V++        ERK+
Sbjct: 100 PPPPPAEPRVYRATPVQQ-----------------IPPPTLHTHAVVTDHSLVPKIERKD 142

Query: 173 SSTTIXXXXXXXXXXXXXXXTGDTTDSKQLSSSS---AFQI-------AGGKPPI-SSSL 221
           SS TI               T   TD+KQ  SSS   AFQI       +GGKPP+ SSSL
Sbjct: 143 SSKTI---NFSYSNSFVSSLTAGDTDTKQPCSSSPSTAFQITNLSQVSSGGKPPLSSSSL 199

Query: 222 KRKCSSETL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAISLKLADIPPDDY 273
           KRKCSSE L                             PAISLK+ADIPPDDY
Sbjct: 200 KRKCSSENLGSAKCGSSSSRCHCSKKSRKMRQKRVVRVPAISLKMADIPPDDY 252


>Glyma11g05650.1 
          Length = 321

 Score =  139 bits (349), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/293 (40%), Positives = 137/293 (46%), Gaps = 61/293 (20%)

Query: 1   MAVELMMSYRNENFISKMEESVVQEAASGLESVNKLIRLLSQKNQEKDQXXXXXXXXXXX 60
           MAV+LMM YRN NF    +E+ V+EAASGLESV KLI+LLSQ  Q+  Q           
Sbjct: 1   MAVDLMMGYRNHNF---AQENAVREAASGLESVEKLIKLLSQTQQQF-QTTSNSTSNSKS 56

Query: 61  XMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAXXXXXXXXXXXXXXXXXXXX 120
            M N+D D +AVADVAVSKFKKVISLLG +RTGHARF                       
Sbjct: 57  SMANIDTDYRAVADVAVSKFKKVISLLGSSRTGHARF-----------------RRAPVA 99

Query: 121 XXXQILESKVYYATXXXXXXXXXXXXXXXYFSSVVIPNDNSNNNGVIS--------ERKE 172
                 E +VY AT                     IP    + + V++        ERK+
Sbjct: 100 PPPPPAEPRVYRATPVQQ-----------------IPPPTLHTHAVVTDHSLVPKIERKD 142

Query: 173 SSTTIXXXXXXXXXXXXXXXTGDTTDSKQLSSSS---AFQI-------AGGKPPI-SSSL 221
           SS TI               T   TD+KQ  SSS   AFQI       +GGKPP+ SSSL
Sbjct: 143 SSKTI---NFSYSNSFVSSLTAGDTDTKQPCSSSPSTAFQITNLSQVSSGGKPPLSSSSL 199

Query: 222 KRKCSSETL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAISLKLADIPPDDY 273
           KRKCSSE L                             PAISLK+ADIPPDDY
Sbjct: 200 KRKCSSENLGSAKCGSSSSRCHCSKKSRKMRQKRVVRVPAISLKMADIPPDDY 252


>Glyma05g20710.1 
          Length = 334

 Score =  138 bits (347), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/297 (38%), Positives = 134/297 (45%), Gaps = 56/297 (18%)

Query: 1   MAVELMMS--YRNEN---FISKMEESVVQEAASGLESVNKLIRLLSQ-KNQEKDQXXXXX 54
           MAV+LM +   RN+N   F +K EE+ VQEAASGLES+ KLIRLLSQ + Q + Q     
Sbjct: 1   MAVDLMTTGCSRNDNINSFTTKAEENAVQEAASGLESIEKLIRLLSQTQTQTRHQINNNS 60

Query: 55  XXXXXXXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAXXXXXXXXXXXXXX 114
                     + MDCK VADVAVSKFKKVISLLGRTRTGHARFRRA              
Sbjct: 61  SNEIA-----IAMDCKVVADVAVSKFKKVISLLGRTRTGHARFRRAPLPNQNQHTQPPS- 114

Query: 115 XXXXXXXXXQILESKVYYATXXXXXXXXXXXXXXXYFSSVVIPNDNSNNNGVISERKESS 174
                       E  V++AT                     IP    N N        SS
Sbjct: 115 ------------EPPVFHATPLHQIPPPSLHQ---------IPKTERNLND-----SSSS 148

Query: 175 TTIXXXXXXXXXXXXXXXTGD-TTDSKQ--------LSSSSAFQI-------AGGKPPIS 218
            TI               TGD   D+KQ         ++++ FQI       + GKPP+S
Sbjct: 149 KTIHFSYPSAATSFISSLTGDGAADNKQPSSSPPAAAATTTPFQITSLSHVSSAGKPPLS 208

Query: 219 -SSLKRKCSSETLXXXXXXXXXXXXXXXXXXXXXX-XXXXXXPAISLKLADIPPDDY 273
            SS KRKCSSE L                             PAISLK+ADIPPDDY
Sbjct: 209 TSSFKRKCSSENLGSGKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDY 265


>Glyma17g06450.1 
          Length = 320

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 7/86 (8%)

Query: 17  KMEESV-VQEAAS-GLESVNKLIRLLSQKNQEKDQXXXXXXXXXXXXMDNMDMDCKAVAD 74
           +MEE++ +QEAAS GL+S+  LIR+LS +                  ++   +DC  + D
Sbjct: 9   RMEENMAIQEAASAGLKSMEHLIRVLSSQIPSASSSSSNAHHHR---LNLNHLDCAEITD 65

Query: 75  VAVSKFKKVISLLGRTRTGHARFRRA 100
             VSKFK+VI+LL   RTGHARFRRA
Sbjct: 66  FTVSKFKQVINLL--NRTGHARFRRA 89


>Glyma14g10120.1 
          Length = 53

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 30/38 (78%)

Query: 62 MDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRR 99
          M+N+D + K V DV + KF+KVISLLGRTR GH RF+R
Sbjct: 3  MENIDTNYKVVTDVTIFKFEKVISLLGRTRIGHVRFKR 40


>Glyma17g29190.1 
          Length = 316

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 30/101 (29%)

Query: 1   MAVELMMSYRNENFISKMEESVVQEAAS-GLESVNKLIRLLSQKNQEKDQXXXXXXXXXX 59
           MAVELM       F    E+  +QEAAS GL+ +  LIR LS  NQ              
Sbjct: 1   MAVELM------GFPKLDEQKAIQEAASEGLKGMKHLIRTLS--NQP------------- 39

Query: 60  XXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRA 100
               +++ +   + DV VSKFKK+ISLL   RTGHARFRRA
Sbjct: 40  ---SHLNTE---LTDVTVSKFKKLISLL--NRTGHARFRRA 72


>Glyma13g00380.1 
          Length = 324

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 18  MEESV-VQEAAS-GLESVNKLIRLLSQKNQEKDQXXXXXXXXXXXXMDNMDMDCKAVADV 75
           MEE++ +QEAAS GL+S+  LIR+LS +                  ++   +DC  + D 
Sbjct: 13  MEENIAIQEAASAGLKSMEHLIRVLSSQIPSSASSSSNAHHHR---LNLNHLDCTEITDF 69

Query: 76  AVSKFKKVISLLGRTRTGHARFRRA 100
            VSKFK+VI+LL   RTGHARFR A
Sbjct: 70  TVSKFKQVINLL--NRTGHARFRSA 92


>Glyma09g06980.1 
          Length = 296

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 14/88 (15%)

Query: 16  SKMEES--VVQEAAS-GLESVNKLIRLLSQKNQEKDQXXXXXXXXXXXXMDNMDMDCKAV 72
           ++MEE    +QEAAS GL+S+  LIRLLS  +   +             ++   +DC  +
Sbjct: 13  TRMEEENIAIQEAASAGLKSMEHLIRLLSPSSSLHNNVNN---------LNLNHLDCSEI 63

Query: 73  ADVAVSKFKKVISLLGRTRTGHARFRRA 100
               VSKFK+VI+LL   RTGHARFRR+
Sbjct: 64  TGFTVSKFKQVINLL--NRTGHARFRRS 89