Jatropha Genome Database

JcCB0013651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0013651.10 - phase: 0 
         (303 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g11860.1                                                       421   e-118
Glyma09g01010.1                                                       416   e-116
Glyma02g43770.1                                                       353   9e-98
Glyma14g05140.1                                                       328   5e-90
Glyma02g43770.2                                                       200   1e-51

>Glyma15g11860.1 
          Length = 301

 Score =  421 bits (1081), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/305 (72%), Positives = 241/305 (79%), Gaps = 6/305 (1%)

Query: 1   MASRDKKPAKPSSSRTGGIRTLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPTKG 60
           MASRD K  K SSSR G IRTLSDLNR            PQEYYTGGEKSGMLVQDP+KG
Sbjct: 1   MASRDNK--KASSSRAGRIRTLSDLNR-PSADSDSDSDGPQEYYTGGEKSGMLVQDPSKG 57

Query: 61  NDVDAIFNQARQLGAVEGPLDQXXXXXXXXXXXXXXRLLSGETVPSAP-QQPEAVIHNIV 119
           NDVD IFNQARQLGAVE PLDQ              RLLSGET  S   QQPEAV+HNIV
Sbjct: 58  NDVDEIFNQARQLGAVERPLDQLQEPPRSTSFTGTGRLLSGETTRSTNNQQPEAVVHNIV 117

Query: 120 FWTNGFTVNDGPLRRLDDPENASFLESIRKSECPKELEPEDRRSSVHVNLIRRDEQCPEP 179
           FW+NGFTVNDGPLR LDDPENASFLESI+KSECPKELEPEDRRSSV+VNLIRR+E   EP
Sbjct: 118 FWSNGFTVNDGPLRSLDDPENASFLESIKKSECPKELEPEDRRSSVNVNLIRRNENYREP 177

Query: 180 EKQRHVPFQGVGRTLGSSXXXXXXXXXXXXXL-NTAPTPSMGLVVNETLPSTSIQLRLAD 238
           EKQ HV FQGVGRTLGSS               NTAPTPS GLVV+++LPSTSIQLRLAD
Sbjct: 178 EKQ-HVAFQGVGRTLGSSSTSMAPDPPAASTPPNTAPTPSAGLVVDQSLPSTSIQLRLAD 236

Query: 239 GTRMIAHFNFNHTVNDIRAFINASRPGGAQNYQLQLMGFPPKLLSDPTQTIEEAGLGNSV 298
           GTR+I+HFN++HT++DIRAFI+ASRPGG QNYQLQLMGFPPK+L+D TQTIE+AGL NSV
Sbjct: 237 GTRLISHFNYHHTISDIRAFIDASRPGGRQNYQLQLMGFPPKILADETQTIEQAGLANSV 296

Query: 299 VIQKF 303
           VIQKF
Sbjct: 297 VIQKF 301


>Glyma09g01010.1 
          Length = 301

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/305 (71%), Positives = 238/305 (78%), Gaps = 6/305 (1%)

Query: 1   MASRDKKPAKPSSSRTGGIRTLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPTKG 60
           MASRD K  K SSSR G IRTLSDLNR            PQEYYTGGEKSGMLVQDP+KG
Sbjct: 1   MASRDNK--KASSSRAGRIRTLSDLNR-PSADSDSDSDGPQEYYTGGEKSGMLVQDPSKG 57

Query: 61  NDVDAIFNQARQLGAVEGPLDQXXXXXXXXXXXXXXRLLSGETVPSAP-QQPEAVIHNIV 119
           NDVD IFNQARQLGAVE PLDQ              RLLSGET  S   QQPEAV+HNIV
Sbjct: 58  NDVDEIFNQARQLGAVERPLDQLQEPPRSTSFTGTGRLLSGETTRSTNNQQPEAVVHNIV 117

Query: 120 FWTNGFTVNDGPLRRLDDPENASFLESIRKSECPKELEPEDRRSSVHVNLIRRDEQCPEP 179
           FW+NGFTVNDGPLR LDDP+NASFLESI+KSECPKELEPEDRRSSV+VNLIRR+E   EP
Sbjct: 118 FWSNGFTVNDGPLRSLDDPQNASFLESIKKSECPKELEPEDRRSSVNVNLIRRNENYREP 177

Query: 180 EKQRHVPFQGVGRTLGSSXXXXXXXXXXXXX-LNTAPTPSMGLVVNETLPSTSIQLRLAD 238
           EKQ HV FQGVGRTLGSS               N APTPS GLVV+++LPSTSIQLRLAD
Sbjct: 178 EKQ-HVAFQGVGRTLGSSSTSMAPDSPAASTPTNAAPTPSAGLVVDQSLPSTSIQLRLAD 236

Query: 239 GTRMIAHFNFNHTVNDIRAFINASRPGGAQNYQLQLMGFPPKLLSDPTQTIEEAGLGNSV 298
           GTR+I+HFN++HT++DIRAFI+ASRPGG QNYQLQLMGFPPK+L D TQTIE+AGL NSV
Sbjct: 237 GTRLISHFNYHHTISDIRAFIDASRPGGRQNYQLQLMGFPPKILIDETQTIEQAGLANSV 296

Query: 299 VIQKF 303
           VIQK 
Sbjct: 297 VIQKI 301


>Glyma02g43770.1 
          Length = 408

 Score =  353 bits (907), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 187/310 (60%), Positives = 220/310 (70%), Gaps = 8/310 (2%)

Query: 1   MASRDKKPAKPSSSRTGGIRTLSDLNRRSGPXXXXXXXA---PQEYYTGGEKSGMLVQDP 57
           + SR     KPS+SR G IRTL DL R S             P EYYTGGEKSGMLV+DP
Sbjct: 100 LRSRRSLGKKPSTSRQGKIRTLGDLKRPSRDDDDSGSDPDFEPDEYYTGGEKSGMLVRDP 159

Query: 58  TKGND---VDAIFNQARQLGAVEGPLDQXXXXXXXXXXXXXXRLLSGETVPSAPQQPEAV 114
           T+GN+   +D IF+QARQ+ AV+ P +               RLLSGETVPSAPQ+ E V
Sbjct: 160 TRGNNNNNLDDIFDQARQV-AVDAPPENPRSSSRSRSFSGTARLLSGETVPSAPQRVEEV 218

Query: 115 IHNIVFWTNGFTVNDGPLRRLDDPENASFLESIRKSECPKELEPEDRRSSVHVNLIRRDE 174
            H ++FW NGF+VNDGPLRRLDDP+NA FLESI+KSECPKELEP DRR++VHVNL RRDE
Sbjct: 219 THTVIFWRNGFSVNDGPLRRLDDPQNAPFLESIKKSECPKELEPADRRTAVHVNLTRRDE 278

Query: 175 QCPEPEKQRHVPFQGVGRTLGS-SXXXXXXXXXXXXXLNTAPTPSMGLVVNETLPSTSIQ 233
             PEP K R   FQGVGRTLGS S              NTAP P+MGLVV+E+ P TSIQ
Sbjct: 279 DYPEPVKPRQRAFQGVGRTLGSTSSSNDEPIQTTGASPNTAPMPTMGLVVDESQPVTSIQ 338

Query: 234 LRLADGTRMIAHFNFNHTVNDIRAFINASRPGGAQNYQLQLMGFPPKLLSDPTQTIEEAG 293
           LRLADGTRM++ FN +HT+ D+RAFI+ASRPGG ++YQLQ MGFPPK L+D  Q+IE+AG
Sbjct: 339 LRLADGTRMVSRFNHHHTIRDVRAFIDASRPGGVRSYQLQTMGFPPKQLTDLDQSIEQAG 398

Query: 294 LGNSVVIQKF 303
           + NSVVIQK 
Sbjct: 399 IANSVVIQKL 408


>Glyma14g05140.1 
          Length = 418

 Score =  328 bits (840), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 183/317 (57%), Positives = 215/317 (67%), Gaps = 15/317 (4%)

Query: 1   MASRDKKPAKPSSSRTGGIRTLSDLNRRSGPXXXXX--XXAPQEYYTGGEKSGMLVQDPT 58
           + SR     KPS+SR G IRTL DL R S            P EYYTGGEKSGMLV+DPT
Sbjct: 103 LRSRRSLGKKPSTSRQGKIRTLGDLKRSSRDDDSDSDPDFEPDEYYTGGEKSGMLVRDPT 162

Query: 59  KGND-----VDAIFNQARQLGAVEGPLDQXXXXXXXXXXXXXXRLLSGETVPSAP----- 108
           +GN      VD IF+QARQ+ AV+ P +               RLLSGE +PSA      
Sbjct: 163 RGNSNNNNSVDDIFDQARQV-AVDAPPENPRSSSRSGSFSGTARLLSGERLPSAAAAAPA 221

Query: 109 -QQPEAVIHNIVFWTNGFTVNDGPLRRLDDPENASFLESIRKSECPKELEPEDRRSSVHV 167
            Q+ E V H + FW NGF+VNDGPLRRLDDP+NA FLESI+KSECPKELEP DRR++VHV
Sbjct: 222 PQRVEEVTHTVTFWRNGFSVNDGPLRRLDDPQNAPFLESIKKSECPKELEPADRRTAVHV 281

Query: 168 NLIRRDEQCPEPEKQRHVPFQGVGRTLGS-SXXXXXXXXXXXXXLNTAPTPSMGLVVNET 226
           NL RRDE  PEP K RH  FQGVGRTLGS S              +TAP P+MGL+V+E 
Sbjct: 282 NLTRRDEDYPEPVKPRHRAFQGVGRTLGSTSSSNDEPIQTTGASPSTAPLPTMGLIVDEA 341

Query: 227 LPSTSIQLRLADGTRMIAHFNFNHTVNDIRAFINASRPGGAQNYQLQLMGFPPKLLSDPT 286
              TSIQLRLADGTRM++ FN +HT+ D+RAFI+ASRPGG ++YQLQ MGFPPK L++  
Sbjct: 342 QSVTSIQLRLADGTRMVSRFNHHHTIRDVRAFIDASRPGGVRSYQLQSMGFPPKQLANLD 401

Query: 287 QTIEEAGLGNSVVIQKF 303
           QTIE+AG+ NSVVIQK 
Sbjct: 402 QTIEQAGIANSVVIQKL 418


>Glyma02g43770.2 
          Length = 302

 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/183 (59%), Positives = 126/183 (68%), Gaps = 7/183 (3%)

Query: 1   MASRDKKPAKPSSSRTGGIRTLSDLNRRSGPXXXXXXXA---PQEYYTGGEKSGMLVQDP 57
           + SR     KPS+SR G IRTL DL R S             P EYYTGGEKSGMLV+DP
Sbjct: 100 LRSRRSLGKKPSTSRQGKIRTLGDLKRPSRDDDDSGSDPDFEPDEYYTGGEKSGMLVRDP 159

Query: 58  TKGND---VDAIFNQARQLGAVEGPLDQXXXXXXXXXXXXXXRLLSGETVPSAPQQPEAV 114
           T+GN+   +D IF+QARQ+ AV+ P +               RLLSGETVPSAPQ+ E V
Sbjct: 160 TRGNNNNNLDDIFDQARQV-AVDAPPENPRSSSRSRSFSGTARLLSGETVPSAPQRVEEV 218

Query: 115 IHNIVFWTNGFTVNDGPLRRLDDPENASFLESIRKSECPKELEPEDRRSSVHVNLIRRDE 174
            H ++FW NGF+VNDGPLRRLDDP+NA FLESI+KSECPKELEP DRR++VHVNL RRDE
Sbjct: 219 THTVIFWRNGFSVNDGPLRRLDDPQNAPFLESIKKSECPKELEPADRRTAVHVNLTRRDE 278

Query: 175 QCP 177
             P
Sbjct: 279 DYP 281