Jatropha Genome Database

JcCB0013521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0013521.10 - phase: 0 
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g18220.1                                                       216   6e-57
Glyma09g06930.1                                                       216   9e-57
Glyma20g19580.1                                                        67   1e-11

>Glyma15g18220.1 
          Length = 176

 Score =  216 bits (551), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 106/152 (69%), Positives = 126/152 (82%)

Query: 14  MDPIFHIVKIVPYXXXXXXXXXXXXXXXXXXXXMTVFALVLLTYFMVVSGIVYDVIVEPP 73
           +DPIFH+++++P+                      VFAL+LLTYFMVVSGIVYD+IVEPP
Sbjct: 25  IDPIFHLLRVLPFSFLRPPRLRLKLPSLSLPSPNAVFALLLLTYFMVVSGIVYDIIVEPP 84

Query: 74  GIGSTQDPATGSIRPVVFLPGRVNGQYIIEGLSSGFMFVLGGTGIVLMDLALDKNRAKSV 133
           GIGSTQDP TG++RPVVF+ GRVNGQYIIEGLSSGFMFVLGG GI+L+DLALD+NRAKSV
Sbjct: 85  GIGSTQDPYTGAVRPVVFMSGRVNGQYIIEGLSSGFMFVLGGVGIILLDLALDRNRAKSV 144

Query: 134 KVSYATAGISSLIIAYVMSMLFIRIKIPGYLR 165
           KVSYA+AG+SS+++AYVMSMLFIRIKIP YLR
Sbjct: 145 KVSYASAGVSSVVLAYVMSMLFIRIKIPAYLR 176


>Glyma09g06930.1 
          Length = 177

 Score =  216 bits (550), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 106/152 (69%), Positives = 126/152 (82%)

Query: 14  MDPIFHIVKIVPYXXXXXXXXXXXXXXXXXXXXMTVFALVLLTYFMVVSGIVYDVIVEPP 73
           +DPIFH+++++P+                      VFAL+LLTYFMVVSGIVYD+IVEPP
Sbjct: 26  IDPIFHLLRVLPFSFLRPPRLRLKLPSFTLPSPNAVFALLLLTYFMVVSGIVYDIIVEPP 85

Query: 74  GIGSTQDPATGSIRPVVFLPGRVNGQYIIEGLSSGFMFVLGGTGIVLMDLALDKNRAKSV 133
           GIGSTQDP TG++RPVVF+ GRVNGQYIIEGLSSGFMFVLGG GI+L+DLALD+NRAKSV
Sbjct: 86  GIGSTQDPYTGAVRPVVFMSGRVNGQYIIEGLSSGFMFVLGGIGIILLDLALDRNRAKSV 145

Query: 134 KVSYATAGISSLIIAYVMSMLFIRIKIPGYLR 165
           KVSYA+AG+SS+++AYVMSMLFIRIKIP YLR
Sbjct: 146 KVSYASAGVSSVVLAYVMSMLFIRIKIPAYLR 177


>Glyma20g19580.1 
          Length = 124

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 2/58 (3%)

Query: 99  QYIIEGLSSGFMFVLGGTGIVLMDLALDKNRAKSVKVSYATAGISSLIIAYVMSMLFI 156
           Q+++     G +  L G  I+L+DLAL++NR KSVKVSYA+  +SS+++AYVMSMLFI
Sbjct: 44  QWLVH--PRGTLLNLNGNNIILLDLALNRNRMKSVKVSYASTNVSSVVLAYVMSMLFI 99