Jatropha Genome Database

JcCB0013291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0013291.10 + phase: 0 
         (111 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g03720.1                                                       176   3e-45
Glyma07g36820.1                                                       172   7e-44
Glyma15g14970.1                                                       162   5e-41
Glyma09g03970.1                                                       159   5e-40

>Glyma17g03720.1 
          Length = 110

 Score =  176 bits (447), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/111 (84%), Positives = 96/111 (86%), Gaps = 1/111 (0%)

Query: 1   MEGADEGGIERVVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQXXXXXXXXXXXXDWNAM 60
           MEGADEG IERVVDSKDLQQQSKA DKLTDRVEDRQLDS+RVQ            DW AM
Sbjct: 1   MEGADEG-IERVVDSKDLQQQSKAFDKLTDRVEDRQLDSSRVQEAMASIAASAEADWQAM 59

Query: 61  RMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIQHLLR 111
           RMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAI+HLLR
Sbjct: 60  RMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR 110


>Glyma07g36820.1 
          Length = 110

 Score =  172 bits (436), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 91/111 (81%), Positives = 95/111 (85%), Gaps = 1/111 (0%)

Query: 1   MEGADEGGIERVVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQXXXXXXXXXXXXDWNAM 60
           MEG+DEG +ERVVDSKDLQQQSKA DKLTDRVEDRQLDS+RVQ            DW AM
Sbjct: 1   MEGSDEG-VERVVDSKDLQQQSKAFDKLTDRVEDRQLDSSRVQEAMASIAASSEADWQAM 59

Query: 61  RMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIQHLLR 111
           R REKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAI+HLLR
Sbjct: 60  RKREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR 110


>Glyma15g14970.1 
          Length = 110

 Score =  162 bits (411), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 88/110 (80%), Positives = 93/110 (84%), Gaps = 1/110 (0%)

Query: 1   MEGADEGGIERVVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQXXXXXXXXXXXXDWNAM 60
           MEG +EG +E +VDSKDLQQQSKALDKLTD VEDRQLDSTRVQ            D NAM
Sbjct: 1   MEGGEEG-LEMMVDSKDLQQQSKALDKLTDHVEDRQLDSTRVQEAMASIAASAEADRNAM 59

Query: 61  RMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIQHLL 110
           R+REKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAI+HLL
Sbjct: 60  RIREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLL 109


>Glyma09g03970.1 
          Length = 110

 Score =  159 bits (403), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 87/110 (79%), Positives = 92/110 (83%), Gaps = 1/110 (0%)

Query: 1   MEGADEGGIERVVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQXXXXXXXXXXXXDWNAM 60
           MEG +EG +E +VDSKDLQQQSKALDKLTDRVEDRQLDSTRV             D NAM
Sbjct: 1   MEGGEEG-VEMMVDSKDLQQQSKALDKLTDRVEDRQLDSTRVLEAMASIAASAQADRNAM 59

Query: 61  RMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIQHLL 110
           R+REKELAAVKINAADVDIIANELELD KVAERTLREHKGDAVAAI+HLL
Sbjct: 60  RIREKELAAVKINAADVDIIANELELDIKVAERTLREHKGDAVAAIRHLL 109