Jatropha Genome Database

JcCB0013151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0013151.10 - phase: 1 /partial
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g12110.1                                                       301   7e-82
Glyma12g04320.1                                                       292   3e-79
Glyma09g05240.1                                                        57   2e-08
Glyma15g16570.1                                                        54   2e-07
Glyma17g03920.1                                                        53   3e-07
Glyma07g36680.2                                                        53   5e-07
Glyma07g36680.1                                                        52   6e-07

>Glyma11g12110.1 
          Length = 835

 Score =  301 bits (770), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 150/253 (59%), Positives = 181/253 (71%), Gaps = 10/253 (3%)

Query: 46  QSRFATSESTPTT----HXXXXXXXXXXXXXXXXXXXXXXXXXXXDYMDEATPTFVWGTN 101
           +SRFA+S++TPT                                   MD+A PTFVWGTN
Sbjct: 53  RSRFASSDATPTAPRSRQRSGGGRVPATSTSTTDDVPASSDGGDGFDMDDARPTFVWGTN 112

Query: 102 ISVEDVKERFQMFLKHYRDNSQSLSNE------IFEEGKYVKAIRKVLEVEGEGLDVDAH 155
           ISVEDV +  + FL+++RD S S   +      +  EGKY K IR+V+EVEG+ LDVDA 
Sbjct: 113 ISVEDVNDAIKRFLRNFRDASSSQGGDNDDGLHLHTEGKYEKLIRQVIEVEGDSLDVDAR 172

Query: 156 DVFDYDSDLYAKMVRYPLEVLAIFDIVLMDFVGLMDPLFEKHVQVRIYNLKTSTTMRNLN 215
           DVFD+D DLY KMVRYPLEVLAIFD+VLM+ VG + P+FEKH+Q RI+NL+ ST+MRNLN
Sbjct: 173 DVFDHDPDLYTKMVRYPLEVLAIFDLVLMNMVGELKPMFEKHIQTRIFNLRNSTSMRNLN 232

Query: 216 PSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGNVAGPFLVERGRINEPTVCLKQECL 275
           PSDIE+MVSLKGM+IR SSIIPEIREAIFRCLVCG  + P  VERGRI EPT+CLK+EC 
Sbjct: 233 PSDIERMVSLKGMVIRSSSIIPEIREAIFRCLVCGFCSEPVPVERGRITEPTICLKEECQ 292

Query: 276 AKNSMTLVHNRCR 288
           ++NSMTLVHNRCR
Sbjct: 293 SRNSMTLVHNRCR 305


>Glyma12g04320.1 
          Length = 839

 Score =  292 bits (747), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 135/203 (66%), Positives = 165/203 (81%), Gaps = 6/203 (2%)

Query: 92  ATPTFVWGTNISVEDVKERFQMFLKHYRDNSQSLSNE------IFEEGKYVKAIRKVLEV 145
           A PTFVWGTNISVEDV +  + F++++R+ S S   +      +  EGKY K IR+V++V
Sbjct: 107 ARPTFVWGTNISVEDVNDAIKRFVRNFREASSSQGGDDDDGLHLHTEGKYEKLIRQVIDV 166

Query: 146 EGEGLDVDAHDVFDYDSDLYAKMVRYPLEVLAIFDIVLMDFVGLMDPLFEKHVQVRIYNL 205
           EG+ LDVDA DVFD+D DLY KMVRYPLEVLAIFD+VLM+ V  + P+FEKH+Q RI+NL
Sbjct: 167 EGDSLDVDARDVFDHDPDLYTKMVRYPLEVLAIFDLVLMNMVSELKPMFEKHIQTRIFNL 226

Query: 206 KTSTTMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGNVAGPFLVERGRINE 265
           +TST+MRNLNPSDIE+MVSLKGM+IR SSIIPEIREAIFRCLVCG  + P  VERGRI E
Sbjct: 227 RTSTSMRNLNPSDIERMVSLKGMVIRSSSIIPEIREAIFRCLVCGFCSEPVPVERGRITE 286

Query: 266 PTVCLKQECLAKNSMTLVHNRCR 288
           PT+CL++EC ++NSM LVHNRCR
Sbjct: 287 PTICLREECQSRNSMALVHNRCR 309


>Glyma09g05240.1 
          Length = 862

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 195 EKHVQVRIYNLKTSTTMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGNVAG 254
           +K + +  YN+     +R L  S+I ++VS+ G++ R S + PE+ +  F+CL CG V  
Sbjct: 104 DKDINIAFYNMPIVKRLRELGTSEIGRLVSVTGVVTRTSEVRPELLQGTFKCLECGGVI- 162

Query: 255 PFLVERGRINEPTVCLKQECLAKNSMTLVHNRCR 288
             + ++ +  EPT+C    C  +    L+    +
Sbjct: 163 KNVEQQFKYTEPTICTNATCSNRTRWVLLRQESK 196


>Glyma15g16570.1 
          Length = 849

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 44/94 (46%)

Query: 195 EKHVQVRIYNLKTSTTMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGNVAG 254
           +K + +  YN+     +R L  S+I ++VS+ G++ R S + PE+    F+CL CG V  
Sbjct: 104 DKDINIAFYNMPIVKRLRELGTSEIGRLVSVTGVVTRTSEVRPELLHGTFKCLECGGVIK 163

Query: 255 PFLVERGRINEPTVCLKQECLAKNSMTLVHNRCR 288
               +      PT+C    C  +    L+    +
Sbjct: 164 NVEQQFKYTEVPTICANATCSNRTRWVLLRQESK 197


>Glyma17g03920.1 
          Length = 935

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 5/154 (3%)

Query: 132 EGKYVKAIRKVLEVEGEGLDVDAHDVFDYDSDLYAKMVRYPLEVLAIFDIVLMDFVGLMD 191
           + +YV  I +++      L++D         ++   +   P  VL + + V  + V  + 
Sbjct: 238 DKEYVWLINEMVSASKCSLEIDYKQFIYVHPNIAIWLADAPQSVLEVMEDVTKNVVFELH 297

Query: 192 PLF---EKHVQVRIYNLKTSTTMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLV 248
           P +    + + VRI NL     +RN+    +  M+ + G++ R S + P++++  + C  
Sbjct: 298 PNYRNIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNK 357

Query: 249 CGNVAGPFLVERGRINEPTVCLKQECLAKNSMTL 282
           CG + GPF   +   +E  V    EC +K   T+
Sbjct: 358 CGAILGPFF--QNSYSEVKVGSCPECQSKGPFTV 389


>Glyma07g36680.2 
          Length = 789

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 5/152 (3%)

Query: 134 KYVKAIRKVLEVEGEGLDVDAHDVFDYDSDLYAKMVRYPLEVLAIFDIVLMDFVGLMDPL 193
           +YV  I +++      L++D         ++   +   P  VL + + V    V  + P 
Sbjct: 234 EYVWLINEMVSASKCSLEIDYKQFIYVHPNIAIWLADAPQSVLEVMEDVTKSVVFELHPN 293

Query: 194 F---EKHVQVRIYNLKTSTTMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCG 250
           +    + + VRI NL     +RN+    +  M+ + G++ R S + P++++  + C  CG
Sbjct: 294 YRNIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCG 353

Query: 251 NVAGPFLVERGRINEPTVCLKQECLAKNSMTL 282
            + GPF   +   +E  V    EC +K   T+
Sbjct: 354 AILGPFF--QNSYSEVKVGSCPECQSKGPFTV 383


>Glyma07g36680.1 
          Length = 929

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 5/154 (3%)

Query: 132 EGKYVKAIRKVLEVEGEGLDVDAHDVFDYDSDLYAKMVRYPLEVLAIFDIVLMDFVGLMD 191
           + +YV  I +++      L++D         ++   +   P  VL + + V    V  + 
Sbjct: 232 DKEYVWLINEMVSASKCSLEIDYKQFIYVHPNIAIWLADAPQSVLEVMEDVTKSVVFELH 291

Query: 192 PLF---EKHVQVRIYNLKTSTTMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLV 248
           P +    + + VRI NL     +RN+    +  M+ + G++ R S + P++++  + C  
Sbjct: 292 PNYRNIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNK 351

Query: 249 CGNVAGPFLVERGRINEPTVCLKQECLAKNSMTL 282
           CG + GPF   +   +E  V    EC +K   T+
Sbjct: 352 CGAILGPFF--QNSYSEVKVGSCPECQSKGPFTV 383