Jatropha Genome Database

JcCB0012961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0012961.10 - phase: 2 /pseudo/partial
         (359 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g11710.2                                                       187   1e-47
Glyma14g11710.3                                                       187   2e-47
Glyma14g11710.1                                                       187   2e-47
Glyma17g34070.1                                                       185   7e-47

>Glyma14g11710.2 
          Length = 454

 Score =  187 bits (475), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 84/112 (75%), Positives = 98/112 (87%)

Query: 197 ASEGGASAFKLDYKGQPACLAQSHQLHKQMAICGDKERVFEVGSVFKAEESYTPRHLCEF 256
           +SEGGA+ F+LDYKGQPACLAQS QLHKQM+ICGD  RVFE+G VF+AE+SYT RHLCEF
Sbjct: 269 SSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSYTHRHLCEF 328

Query: 257 VGHDVEMEIKKHYSEVMDVVDRLFITIFDYLNEHCKNELEAVQRQHPFEPLK 308
            G DVEMEIKKHY EVMD+VDRLF+ +FD LN++CK +LEAV  Q+PFEPLK
Sbjct: 329 TGLDVEMEIKKHYFEVMDIVDRLFVAMFDSLNQNCKKDLEAVGSQYPFEPLK 380


>Glyma14g11710.3 
          Length = 543

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 99/114 (86%)

Query: 197 ASEGGASAFKLDYKGQPACLAQSHQLHKQMAICGDKERVFEVGSVFKAEESYTPRHLCEF 256
           +SEGGA+ F+LDYKGQPACLAQS QLHKQM+ICGD  RVFE+G VF+AE+SYT RHLCEF
Sbjct: 269 SSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSYTHRHLCEF 328

Query: 257 VGHDVEMEIKKHYSEVMDVVDRLFITIFDYLNEHCKNELEAVQRQHPFEPLKVI 310
            G DVEMEIKKHY EVMD+VDRLF+ +FD LN++CK +LEAV  Q+PFEPLK +
Sbjct: 329 TGLDVEMEIKKHYFEVMDIVDRLFVAMFDSLNQNCKKDLEAVGSQYPFEPLKYL 382


>Glyma14g11710.1 
          Length = 543

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 99/114 (86%)

Query: 197 ASEGGASAFKLDYKGQPACLAQSHQLHKQMAICGDKERVFEVGSVFKAEESYTPRHLCEF 256
           +SEGGA+ F+LDYKGQPACLAQS QLHKQM+ICGD  RVFE+G VF+AE+SYT RHLCEF
Sbjct: 269 SSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSYTHRHLCEF 328

Query: 257 VGHDVEMEIKKHYSEVMDVVDRLFITIFDYLNEHCKNELEAVQRQHPFEPLKVI 310
            G DVEMEIKKHY EVMD+VDRLF+ +FD LN++CK +LEAV  Q+PFEPLK +
Sbjct: 329 TGLDVEMEIKKHYFEVMDIVDRLFVAMFDSLNQNCKKDLEAVGSQYPFEPLKYL 382


>Glyma17g34070.1 
          Length = 544

 Score =  185 bits (470), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 99/114 (86%)

Query: 197 ASEGGASAFKLDYKGQPACLAQSHQLHKQMAICGDKERVFEVGSVFKAEESYTPRHLCEF 256
           +SEGGA+ F+LDYKGQPACLAQS QLHKQM+ICGD  RVFE+G VF+AE+SYT RHLCEF
Sbjct: 270 SSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSYTHRHLCEF 329

Query: 257 VGHDVEMEIKKHYSEVMDVVDRLFITIFDYLNEHCKNELEAVQRQHPFEPLKVI 310
            G DVEMEIKKHY EVMD+VDRLF+ +FD LN++CK +LEAV  Q+PFEPLK +
Sbjct: 330 TGLDVEMEIKKHYFEVMDLVDRLFVAMFDSLNQNCKKDLEAVGSQYPFEPLKYL 383