Jatropha Genome Database

JcCB0012061.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0012061.30 - phase: 2 /partial
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g40320.1                                                        81   2e-16
Glyma14g40320.2                                                        81   2e-16
Glyma14g40320.4                                                        81   3e-16
Glyma17g37820.1                                                        80   8e-16
Glyma14g40320.3                                                        79   2e-15

>Glyma14g40320.1 
          Length = 847

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 49/66 (74%)

Query: 2   VDNDPDEATDNDMKGIEDAYVDKKKGEYAKFWNELGESIKLNIMEDATNRNILAKFLKFE 61
            D DPDE+TD + K    +  D+KKG+Y+KFWNE G+SIKL I+EDATNRN LAK L+FE
Sbjct: 487 ADEDPDESTDKEKKEDASSDNDEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFE 546

Query: 62  RIKSDA 67
             KS+ 
Sbjct: 547 STKSEG 552


>Glyma14g40320.2 
          Length = 816

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 49/66 (74%)

Query: 2   VDNDPDEATDNDMKGIEDAYVDKKKGEYAKFWNELGESIKLNIMEDATNRNILAKFLKFE 61
            D DPDE+TD + K    +  D+KKG+Y+KFWNE G+SIKL I+EDATNRN LAK L+FE
Sbjct: 487 ADEDPDESTDKEKKEDASSDNDEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFE 546

Query: 62  RIKSDA 67
             KS+ 
Sbjct: 547 STKSEG 552


>Glyma14g40320.4 
          Length = 727

 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 49/66 (74%)

Query: 2   VDNDPDEATDNDMKGIEDAYVDKKKGEYAKFWNELGESIKLNIMEDATNRNILAKFLKFE 61
            D DPDE+TD + K    +  D+KKG+Y+KFWNE G+SIKL I+EDATNRN LAK L+FE
Sbjct: 398 ADEDPDESTDKEKKEDASSDNDEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFE 457

Query: 62  RIKSDA 67
             KS+ 
Sbjct: 458 STKSEG 463


>Glyma17g37820.1 
          Length = 814

 Score = 79.7 bits (195), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 49/66 (74%)

Query: 2   VDNDPDEATDNDMKGIEDAYVDKKKGEYAKFWNELGESIKLNIMEDATNRNILAKFLKFE 61
            D DPDE+TD + K    +  ++KKG+Y+KFWNE G+SIKL I+EDATNRN LAK L+FE
Sbjct: 487 ADEDPDESTDKEKKEDTSSDNNEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFE 546

Query: 62  RIKSDA 67
             KS+ 
Sbjct: 547 STKSEG 552


>Glyma14g40320.3 
          Length = 815

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%)

Query: 2   VDNDPDEATDNDMKGIEDAYVDKKKGEYAKFWNELGESIKLNIMEDATNRNILAKFLKFE 61
            D DPDE+TD + K    +  D+KKG+Y+KFWNE G+SIKL I+EDATNRN LAK L+FE
Sbjct: 487 ADEDPDESTDKEKKDAS-SDNDEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFE 545

Query: 62  RIKSDA 67
             KS+ 
Sbjct: 546 STKSEG 551