Jatropha Genome Database

JcCB0011301.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0011301.20 + phase: 0 
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g22190.3                                                       168   1e-42
Glyma20g22190.2                                                       168   1e-42
Glyma10g28200.2                                                       168   1e-42
Glyma10g28200.1                                                       168   1e-42
Glyma20g22190.1                                                       165   1e-41
Glyma01g16370.1                                                        54   4e-08

>Glyma20g22190.3 
          Length = 382

 Score =  168 bits (425), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/84 (91%), Positives = 83/84 (98%)

Query: 1   MKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGSEMLTNEAGEVTSHLQGMFNRTIRLLE 60
           MKE KFESYFGRKIAIDASMSIYQFLIVVGR+G+EMLTNEAGEVTSHLQGMF+RTIRLLE
Sbjct: 18  MKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLLE 77

Query: 61  SGMKPVYVFDGQPPDLKKQELAKR 84
           +G+KPVYVFDG+PPDLKKQELAKR
Sbjct: 78  AGIKPVYVFDGKPPDLKKQELAKR 101


>Glyma20g22190.2 
          Length = 382

 Score =  168 bits (425), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/84 (91%), Positives = 83/84 (98%)

Query: 1   MKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGSEMLTNEAGEVTSHLQGMFNRTIRLLE 60
           MKE KFESYFGRKIAIDASMSIYQFLIVVGR+G+EMLTNEAGEVTSHLQGMF+RTIRLLE
Sbjct: 18  MKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLLE 77

Query: 61  SGMKPVYVFDGQPPDLKKQELAKR 84
           +G+KPVYVFDG+PPDLKKQELAKR
Sbjct: 78  AGIKPVYVFDGKPPDLKKQELAKR 101


>Glyma10g28200.2 
          Length = 382

 Score =  168 bits (425), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/84 (91%), Positives = 83/84 (98%)

Query: 1   MKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGSEMLTNEAGEVTSHLQGMFNRTIRLLE 60
           MKE KFESYFGRKIAIDASMSIYQFLIVVGR+G+EMLTNEAGEVTSHLQGMF+RTIRLLE
Sbjct: 18  MKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLLE 77

Query: 61  SGMKPVYVFDGQPPDLKKQELAKR 84
           +G+KPVYVFDG+PPDLKKQELAKR
Sbjct: 78  AGIKPVYVFDGKPPDLKKQELAKR 101


>Glyma10g28200.1 
          Length = 382

 Score =  168 bits (425), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/84 (91%), Positives = 83/84 (98%)

Query: 1   MKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGSEMLTNEAGEVTSHLQGMFNRTIRLLE 60
           MKE KFESYFGRKIAIDASMSIYQFLIVVGR+G+EMLTNEAGEVTSHLQGMF+RTIRLLE
Sbjct: 18  MKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLLE 77

Query: 61  SGMKPVYVFDGQPPDLKKQELAKR 84
           +G+KPVYVFDG+PPDLKKQELAKR
Sbjct: 78  AGIKPVYVFDGKPPDLKKQELAKR 101


>Glyma20g22190.1 
          Length = 408

 Score =  165 bits (417), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/84 (91%), Positives = 83/84 (98%)

Query: 1   MKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGSEMLTNEAGEVTSHLQGMFNRTIRLLE 60
           MKE KFESYFGRKIAIDASMSIYQFLIVVGR+G+EMLTNEAGEVTSHLQGMF+RTIRLLE
Sbjct: 18  MKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLLE 77

Query: 61  SGMKPVYVFDGQPPDLKKQELAKR 84
           +G+KPVYVFDG+PPDLKKQELAKR
Sbjct: 78  AGIKPVYVFDGKPPDLKKQELAKR 101


>Glyma01g16370.1 
          Length = 1296

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 7  ESYFGRKIAIDASMSIYQFLIVVGRTGSEMLTNEAGEVTSHLQGMFNRTIRLLESGMKPV 66
          E+  G+ +A+DAS+ + QF+  +     EM+ N      +HL G F R  +LL    KPV
Sbjct: 20 ETLAGKTLAVDASIWMVQFVKAMRDEKGEMVRN------AHLLGFFRRICKLLFLRTKPV 73

Query: 67 YVFDGQPPDLKKQELAKR 84
          +VFDG  P LK++ +  R
Sbjct: 74 FVFDGGTPALKRRTVIAR 91