Jatropha Genome Database

JcCB0010741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0010741.10 + phase: 1 /partial
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16390.1                                                       119   1e-27
Glyma10g03440.1                                                       116   8e-27

>Glyma02g16390.1 
          Length = 735

 Score =  119 bits (298), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/98 (56%), Positives = 71/98 (72%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           FR+K+GL+LS+D+E+QH  K ET+++PQG+                    EEGQPVLVLE
Sbjct: 637 FREKLGLELSEDEESQHKPKVETSANPQGTVVAPMAGLVVKVLVENKTRVEEGQPVLVLE 696

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKV 140
           AMKMEHVVKAP +GYVHGLQ+  G+QVSD ++LFS+KV
Sbjct: 697 AMKMEHVVKAPSSGYVHGLQLMVGEQVSDGSVLFSVKV 734


>Glyma10g03440.1 
          Length = 731

 Score =  116 bits (291), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 69/97 (71%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           FR+K+GL LS+D+E+QH  K ET+++PQG+                    EEGQPVLVLE
Sbjct: 633 FREKLGLKLSEDEESQHKPKVETSANPQGTVVAPMAGLVVKVLVENKTRVEEGQPVLVLE 692

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
           AMKMEHVVKAP +GYVHGLQ+  G+QVSD ++LFS+K
Sbjct: 693 AMKMEHVVKAPSSGYVHGLQLAVGEQVSDGSVLFSVK 729