Jatropha Genome Database

JcCB0010451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0010451.20 + phase: 0 
         (501 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g08750.1                                                       754   0.0  
Glyma06g08850.1                                                       749   0.0  
Glyma06g08850.2                                                       389   e-108
Glyma04g08740.1                                                       222   8e-58

>Glyma04g08750.1 
          Length = 470

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/461 (77%), Positives = 408/461 (88%), Gaps = 3/461 (0%)

Query: 44  LFHSLNSGFRSSNSRIFVSNSV--TNPETE-FLSSVSPVYAPTPPNRELRTPHSGYHFDG 100
           LF         +  R  VS++V   N E E  LSSV P Y+PT PNR+LRTPHSGYHFDG
Sbjct: 10  LFSPTLPLLPPTPPRNSVSDTVPIQNEEKEQTLSSVKPTYSPTLPNRDLRTPHSGYHFDG 69

Query: 101 TTRQFFEGWYFKVSIPERKQSFCFMYSLENPAFRKKLTPFEVAQHGPRSTGVGAQILGAY 160
           TTR+FFEGWYFKVSIPER+QSFCFMYS+E+P+FRK LTP E+AQ+GPR TGVGAQILGA 
Sbjct: 70  TTRKFFEGWYFKVSIPERRQSFCFMYSVESPSFRKPLTPLELAQYGPRFTGVGAQILGAD 129

Query: 161 DKYICQHVEESQNFWGNRHELVLGNTFVAEKGMQPPTKEVPPQDFSRRVSEGFQVTPLWH 220
           DKYICQ+  +SQ FWG+RHEL+LGNTFV+ +  +PP KEVPPQ+F+ RV EGFQVTPLWH
Sbjct: 130 DKYICQYSPQSQFFWGSRHELMLGNTFVSNQNSKPPNKEVPPQEFNDRVLEGFQVTPLWH 189

Query: 221 QGFIRDDGRSDYVQTVKTARWEYSTRPVYGWGDVGSKQKSTAGWLAAFPVFEPHWQICMA 280
           QGFIRDDGRS+YV+TVKTARWEYSTRPVYGWGDVGS QKSTAGWLAAFPVFEPHWQICMA
Sbjct: 190 QGFIRDDGRSNYVETVKTARWEYSTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMA 249

Query: 281 GGLSTGWIEWDGERFEFKDAPSYSEKNWGAGFPRKWFWVQCNVFEGAIGEVALTAAGGLR 340
           GGLSTGWIEWDGER EF +APSYSEKNWG GFPRKWFWVQCNVFEGA GE+ALTAAGGLR
Sbjct: 250 GGLSTGWIEWDGERIEFDNAPSYSEKNWGGGFPRKWFWVQCNVFEGASGEIALTAAGGLR 309

Query: 341 QLPGLTENFESAALIGVHYEGIFYEFVPWNGVLNWEISPWGYWFITAENKSHLVELKATT 400
           Q+PG+TE FE+AALIG+HY G FYEFVPWNGV+NWE++ WGYWF++A+N  ++VEL+ATT
Sbjct: 310 QIPGITETFENAALIGIHYGGNFYEFVPWNGVVNWEVTTWGYWFMSADNGKYVVELEATT 369

Query: 401 KDPGTTLRAPTTESGFAPACKDTCFGDLKLQIWERRYDGTKGKMILDVTSDMAAVEVGGG 460
           +DPGTTLRAPT E+GFAPACKDTCFG+LKLQ+WERRYDG+KGK+ILDV+S+MAA+EVGGG
Sbjct: 370 EDPGTTLRAPTAEAGFAPACKDTCFGNLKLQMWERRYDGSKGKIILDVSSNMAALEVGGG 429

Query: 461 PWFNTWKGKTTTPELLNRALNVPVDVEGIFNFLPLFKPPGL 501
           PWFNTWKGKT+TP  L+R L +P+DVEGIFN +PLFKPPGL
Sbjct: 430 PWFNTWKGKTSTPAALSRVLELPIDVEGIFNPVPLFKPPGL 470


>Glyma06g08850.1 
          Length = 480

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/448 (78%), Positives = 402/448 (89%), Gaps = 3/448 (0%)

Query: 57  SRIFVSNSV--TNPETE-FLSSVSPVYAPTPPNRELRTPHSGYHFDGTTRQFFEGWYFKV 113
           +R F S++V   N E E  ++SV P Y+PTPPNR LRTPHSGYHFDGTTR+FFEGWYFK+
Sbjct: 33  ARSFFSDTVPIDNKEKEQLVTSVKPTYSPTPPNRHLRTPHSGYHFDGTTRKFFEGWYFKL 92

Query: 114 SIPERKQSFCFMYSLENPAFRKKLTPFEVAQHGPRSTGVGAQILGAYDKYICQHVEESQN 173
           SIPER+QSFCFMYS+E+P+FRK LTP EVAQ+G R TGVGAQILGA DKYICQ   ESQ 
Sbjct: 93  SIPERRQSFCFMYSVESPSFRKPLTPLEVAQYGSRFTGVGAQILGADDKYICQFSPESQF 152

Query: 174 FWGNRHELVLGNTFVAEKGMQPPTKEVPPQDFSRRVSEGFQVTPLWHQGFIRDDGRSDYV 233
           FWG+RHEL+LGNTFV  +  +PP KEVPPQ+F+ RV EGFQV+PLWHQGFIRDDGRS+YV
Sbjct: 153 FWGSRHELMLGNTFVPNQNSKPPNKEVPPQEFNDRVLEGFQVSPLWHQGFIRDDGRSNYV 212

Query: 234 QTVKTARWEYSTRPVYGWGDVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGE 293
           +TVKTARWEYSTRPVYGWGDVGS QKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDG+
Sbjct: 213 ETVKTARWEYSTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGK 272

Query: 294 RFEFKDAPSYSEKNWGAGFPRKWFWVQCNVFEGAIGEVALTAAGGLRQLPGLTENFESAA 353
           R EF +APSYSEKNWG GFPRKWFWVQCNVFEGA GE+ALTAAGGLRQ+PG+ E FE+AA
Sbjct: 273 RIEFDNAPSYSEKNWGGGFPRKWFWVQCNVFEGASGEIALTAAGGLRQIPGIAETFENAA 332

Query: 354 LIGVHYEGIFYEFVPWNGVLNWEISPWGYWFITAENKSHLVELKATTKDPGTTLRAPTTE 413
           LIG+HY GIFYEFVPWNGV+NWE++ WGYWF++A+N  ++VE++ATT+DPGTTLRAPT E
Sbjct: 333 LIGIHYGGIFYEFVPWNGVVNWEVTTWGYWFMSADNGRYVVEIEATTEDPGTTLRAPTAE 392

Query: 414 SGFAPACKDTCFGDLKLQIWERRYDGTKGKMILDVTSDMAAVEVGGGPWFNTWKGKTTTP 473
           +G APACKDTCFGDLKLQ+WERRYDG+KGK+ILDV+S+MAA+EVGGGPWFNTWKGKT+TP
Sbjct: 393 AGLAPACKDTCFGDLKLQMWERRYDGSKGKIILDVSSNMAALEVGGGPWFNTWKGKTSTP 452

Query: 474 ELLNRALNVPVDVEGIFNFLPLFKPPGL 501
             L+R L +P+DVEGIFN +PLFKPPGL
Sbjct: 453 AALSRVLELPIDVEGIFNPVPLFKPPGL 480


>Glyma06g08850.2 
          Length = 223

 Score =  389 bits (999), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 176/223 (78%), Positives = 206/223 (92%)

Query: 279 MAGGLSTGWIEWDGERFEFKDAPSYSEKNWGAGFPRKWFWVQCNVFEGAIGEVALTAAGG 338
           MAGGLSTGWIEWDG+R EF +APSYSEKNWG GFPRKWFWVQCNVFEGA GE+ALTAAGG
Sbjct: 1   MAGGLSTGWIEWDGKRIEFDNAPSYSEKNWGGGFPRKWFWVQCNVFEGASGEIALTAAGG 60

Query: 339 LRQLPGLTENFESAALIGVHYEGIFYEFVPWNGVLNWEISPWGYWFITAENKSHLVELKA 398
           LRQ+PG+ E FE+AALIG+HY GIFYEFVPWNGV+NWE++ WGYWF++A+N  ++VE++A
Sbjct: 61  LRQIPGIAETFENAALIGIHYGGIFYEFVPWNGVVNWEVTTWGYWFMSADNGRYVVEIEA 120

Query: 399 TTKDPGTTLRAPTTESGFAPACKDTCFGDLKLQIWERRYDGTKGKMILDVTSDMAAVEVG 458
           TT+DPGTTLRAPT E+G APACKDTCFGDLKLQ+WERRYDG+KGK+ILDV+S+MAA+EVG
Sbjct: 121 TTEDPGTTLRAPTAEAGLAPACKDTCFGDLKLQMWERRYDGSKGKIILDVSSNMAALEVG 180

Query: 459 GGPWFNTWKGKTTTPELLNRALNVPVDVEGIFNFLPLFKPPGL 501
           GGPWFNTWKGKT+TP  L+R L +P+DVEGIFN +PLFKPPGL
Sbjct: 181 GGPWFNTWKGKTSTPAALSRVLELPIDVEGIFNPVPLFKPPGL 223


>Glyma04g08740.1 
          Length = 203

 Score =  222 bits (565), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 108/167 (64%), Positives = 127/167 (76%), Gaps = 6/167 (3%)

Query: 45  FHSLNSGFRSSNSRIFVSNSVT------NPETEFLSSVSPVYAPTPPNRELRTPHSGYHF 98
           F SL   F S+ +R+   NSV+        + + L SV P Y+PTPPNR LRTPHSGYHF
Sbjct: 17  FSSLKHAFPSTTTRLVAHNSVSETVPIHKEKEQTLPSVKPTYSPTPPNRGLRTPHSGYHF 76

Query: 99  DGTTRQFFEGWYFKVSIPERKQSFCFMYSLENPAFRKKLTPFEVAQHGPRSTGVGAQILG 158
           DGTTR+FFEGWYFKVSIPERKQSFCFMY++E+P FRK LT  E+AQ+GPR TGVGAQILG
Sbjct: 77  DGTTRKFFEGWYFKVSIPERKQSFCFMYTVESPLFRKPLTQLELAQYGPRFTGVGAQILG 136

Query: 159 AYDKYICQHVEESQNFWGNRHELVLGNTFVAEKGMQPPTKEVPPQDF 205
           A DKY+CQH  +S  FWG+RHEL+LGNTF   +  +PP KEVPPQ F
Sbjct: 137 ADDKYVCQHSPQSHFFWGSRHELMLGNTFEPNQNSKPPNKEVPPQVF 183