Jatropha Genome Database

JcCB0009781.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0009781.20 + phase: 0 
         (368 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36810.1                                                       594   e-170
Glyma01g01170.1                                                        53   7e-07

>Glyma12g36810.1 
          Length = 346

 Score =  594 bits (1532), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 288/365 (78%), Positives = 316/365 (86%), Gaps = 19/365 (5%)

Query: 1   MDVPVIDLTRYLEIADKLSTEPAELSGQLEELGPWLGDLCKEVSRILRETGALVVKDPRC 60
           MD+PVIDL+               LSG+ + L      LC EVSR LRETGAL+VKDPRC
Sbjct: 1   MDLPVIDLS-------------PSLSGEWDPL------LCAEVSRSLRETGALLVKDPRC 41

Query: 61  SAEDNDRFIDMMEKYFERPPEFKRMQERPQLHYQVGVTPEGVEVPRSLVDKEMQEKLESM 120
           + EDNDRFIDMME+YF +P +FK   ERP LHYQVGVTPE VEVPRSLVD+EMQEKL++M
Sbjct: 42  TVEDNDRFIDMMERYFSKPRDFKHRHERPHLHYQVGVTPEKVEVPRSLVDEEMQEKLKAM 101

Query: 121 PKEFQPSTPRGPDPKWRYMWRVGPRPLDTRFKELNSEPVIPEGFPEWKETMDSWGHKMIS 180
           PKE QP+TP GPD KWRY WR+GPRP +TRF+ELN+EPVIPEGFPEWKETMDSWG+KMI+
Sbjct: 102 PKENQPNTPVGPDLKWRYFWRIGPRPSNTRFQELNAEPVIPEGFPEWKETMDSWGYKMIA 161

Query: 181 AIEAVAEMAAIGFGLSKDAFTSLMKQGPHLLAPTGSDLRCYGQEGTVFAGYHYDLNFLTI 240
           AIE VAEMAAIGFGL KDAFTSLMK GPHLLAPTGSDL+ YGQEGT+FAGYHYDLNFLTI
Sbjct: 162 AIEVVAEMAAIGFGLPKDAFTSLMKLGPHLLAPTGSDLQKYGQEGTIFAGYHYDLNFLTI 221

Query: 241 HGRSRFPGLNIWLRNGQKVEVKVPLGCLLIQTGKQIEWLTAGDCIAGLHEVVVTKRTIDA 300
           HGRSRFPGLNIWLRNGQKVEVKVP+GCLLIQTGKQIEWLT GDCIAG+HEVV TKRT+DA
Sbjct: 222 HGRSRFPGLNIWLRNGQKVEVKVPIGCLLIQTGKQIEWLTGGDCIAGMHEVVATKRTLDA 281

Query: 301 IKLASEQQRSLWRVSSTLFAHIASDAVLRPLGHFAEFPLASKYPPICAGEFVEQELAVIN 360
           I LA EQ RSLWRVSSTLFAHIASDAVL+PLGHFAE PLASKYPP+CAGE+VEQEL+VIN
Sbjct: 282 ISLAQEQNRSLWRVSSTLFAHIASDAVLKPLGHFAESPLASKYPPMCAGEYVEQELSVIN 341

Query: 361 LKGSK 365
           LKG K
Sbjct: 342 LKGKK 346


>Glyma01g01170.1 
          Length = 332

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 115/318 (36%), Gaps = 49/318 (15%)

Query: 49  ETGALVVKDPRCSAEDNDRFIDMMEKYFERPPEFKRMQERPQLHYQVGVTPEGVEVPRSL 108
           ++G   V +   S E  D      +K+F  P   K    R + H   G TP    V   L
Sbjct: 35  DSGFFYVVNHGISQEFMDEVFAQSKKFFSLPHNEKMKTLRNEQHR--GYTP----VLDEL 88

Query: 109 VDKEMQEKLESMPKEFQPSTPRGPDPKWRYMWRVGPRPLDTRFKELNSEPVIPEGFPEWK 168
           +D E Q  +    + +     +G D         GP          N+ P  P+  P W+
Sbjct: 89  LDPENQVHVGDYKEGYYIGVEKGEDDPQSKKPFYGP----------NNWPA-PDVLPGWR 137

Query: 169 ETMDSWGHKMISAIEAVAEMAAIGFGLSKDAFTSLMKQGPHLLAPTGSDLRCYGQEGTVF 228
           ETM+ +  + +   +AVA+M A+   L  + F       P +L    + LR    EG V 
Sbjct: 138 ETMEKFHQETLEVGKAVAKMIALALDLDANYFDR-----PEILGEPIAILRLLHYEGQVS 192

Query: 229 --------AGYHYDLNFLTIHGRSRFPGLNIWLRNG---QKVEVKVPL-GCLLIQTGKQI 276
                   AG H D   +T+      PGL I        QK E   PL G  ++  G  +
Sbjct: 193 DPSKGLYGAGAHTDFGLITLLATDDVPGLQICKDRDAKPQKWEDVAPLKGAFIVNLGDML 252

Query: 277 EWLTAGDCIAGLHEVVVTKRTIDAIKLASEQQRSLWRVSSTLFAHIASDAVLRPLGHFAE 336
           E  +     + LH V+   +                R S   F   + D ++  L     
Sbjct: 253 ERWSNCVFKSTLHRVLGNGQG---------------RYSIAYFLEPSLDCLVECLPTCKS 297

Query: 337 FPLASKYPPICAGEFVEQ 354
                KYPPI   +++ Q
Sbjct: 298 DSNPPKYPPILCHDYMTQ 315