Jatropha Genome Database

JcCB0009541.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0009541.40 + phase: 0 /partial
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g09630.2                                                       266   7e-72
Glyma02g09630.1                                                       266   1e-71
Glyma10g33710.1                                                       223   1e-58
Glyma10g33710.2                                                       223   1e-58
Glyma10g22680.1                                                       214   5e-56
Glyma20g33880.1                                                       180   9e-46
Glyma20g12510.1                                                       156   1e-38
Glyma06g14960.1                                                        76   2e-14
Glyma04g39930.1                                                        75   5e-14
Glyma04g39930.2                                                        69   2e-12

>Glyma02g09630.2 
          Length = 310

 Score =  266 bits (681), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 124/181 (68%), Positives = 149/181 (82%), Gaps = 1/181 (0%)

Query: 10  SLTCALFPHHGGLSRTTSAFKWRKERHVRRQTGSAIVTAKFELKPPPYPLNALEPHMSKD 69
           S +C L  H  G S  T  F  +KE    R+ G   +TAKFELKPPPYPL+ALEP MS++
Sbjct: 15  SPSCFLPRHPHGFSSGTFKF-LKKESRCLRKAGRTKITAKFELKPPPYPLSALEPIMSQE 73

Query: 70  TLEYHWGKHHRAYVDNLNKQIVGTELDSLPLEDVVIVTYNKGDVLPAFNNAAQAWNHEFF 129
           TLEYHWGKHHR YVDNLN+QI GT+LD   LE+ +++TYNKGD+LPAFNNAAQAWNH+FF
Sbjct: 74  TLEYHWGKHHRTYVDNLNRQIDGTDLDGNSLENTIVITYNKGDILPAFNNAAQAWNHDFF 133

Query: 130 WGCMKPGGGGKPSGELLQLIERDFGSFKKFVEEFRSAAATQFGSGWAWLAYKANRLNVEN 189
           W  MKPGGGG+PSG+LL LIERDFGSF+KF++EF++AA+TQFGSGWAWLAYK +RL+VEN
Sbjct: 134 WESMKPGGGGRPSGDLLNLIERDFGSFEKFLDEFKTAASTQFGSGWAWLAYKESRLDVEN 193

Query: 190 A 190
           A
Sbjct: 194 A 194


>Glyma02g09630.1 
          Length = 313

 Score =  266 bits (679), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 124/183 (67%), Positives = 152/183 (83%), Gaps = 2/183 (1%)

Query: 10  SLTCALFPH-HGGLSRTTSAFKW-RKERHVRRQTGSAIVTAKFELKPPPYPLNALEPHMS 67
           S +C L  H HG    ++  FK+ +KE    R+ G   +TAKFELKPPPYPL+ALEP MS
Sbjct: 15  SPSCFLPRHPHGSTWFSSGTFKFLKKESRCLRKAGRTKITAKFELKPPPYPLSALEPIMS 74

Query: 68  KDTLEYHWGKHHRAYVDNLNKQIVGTELDSLPLEDVVIVTYNKGDVLPAFNNAAQAWNHE 127
           ++TLEYHWGKHHR YVDNLN+QI GT+LD   LE+ +++TYNKGD+LPAFNNAAQAWNH+
Sbjct: 75  QETLEYHWGKHHRTYVDNLNRQIDGTDLDGNSLENTIVITYNKGDILPAFNNAAQAWNHD 134

Query: 128 FFWGCMKPGGGGKPSGELLQLIERDFGSFKKFVEEFRSAAATQFGSGWAWLAYKANRLNV 187
           FFW  MKPGGGG+PSG+LL LIERDFGSF+KF++EF++AA+TQFGSGWAWLAYK +RL+V
Sbjct: 135 FFWESMKPGGGGRPSGDLLNLIERDFGSFEKFLDEFKTAASTQFGSGWAWLAYKESRLDV 194

Query: 188 ENA 190
           ENA
Sbjct: 195 ENA 197


>Glyma10g33710.1 
          Length = 244

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 110/145 (75%), Positives = 131/145 (90%)

Query: 46  VTAKFELKPPPYPLNALEPHMSKDTLEYHWGKHHRAYVDNLNKQIVGTELDSLPLEDVVI 105
           V AKFELKPPPYPLN LEP MS+ TLE+HWGKHH+ YV+NL KQIVGTELD   LE++++
Sbjct: 24  VNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQIVGTELDGKSLEEIIV 83

Query: 106 VTYNKGDVLPAFNNAAQAWNHEFFWGCMKPGGGGKPSGELLQLIERDFGSFKKFVEEFRS 165
            +YNKGD+LPAFNNAAQ WNH+FFW CMKPGGGGKPSGELL+LIERDFGSF+KF++EF++
Sbjct: 84  TSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFEKFLDEFKA 143

Query: 166 AAATQFGSGWAWLAYKANRLNVENA 190
           AAATQFGSGWAWLAY+A++ + ENA
Sbjct: 144 AAATQFGSGWAWLAYRASKFDGENA 168


>Glyma10g33710.2 
          Length = 210

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 110/145 (75%), Positives = 131/145 (90%)

Query: 46  VTAKFELKPPPYPLNALEPHMSKDTLEYHWGKHHRAYVDNLNKQIVGTELDSLPLEDVVI 105
           V AKFELKPPPYPLN LEP MS+ TLE+HWGKHH+ YV+NL KQIVGTELD   LE++++
Sbjct: 24  VNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQIVGTELDGKSLEEIIV 83

Query: 106 VTYNKGDVLPAFNNAAQAWNHEFFWGCMKPGGGGKPSGELLQLIERDFGSFKKFVEEFRS 165
            +YNKGD+LPAFNNAAQ WNH+FFW CMKPGGGGKPSGELL+LIERDFGSF+KF++EF++
Sbjct: 84  TSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFEKFLDEFKA 143

Query: 166 AAATQFGSGWAWLAYKANRLNVENA 190
           AAATQFGSGWAWLAY+A++ + ENA
Sbjct: 144 AAATQFGSGWAWLAYRASKFDGENA 168


>Glyma10g22680.1 
          Length = 272

 Score =  214 bits (544), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 96/135 (71%), Positives = 116/135 (85%), Gaps = 4/135 (2%)

Query: 60  NALEPHMSKDTLEYHWGKHHRAYVDNLNKQIVGTELDSLPLEDVVIVTYNKGDVLPAFNN 119
           N+LEP MS++T+EYHWGKHHR YVDNLN+QI GT+LD   LED +++ YNKGD+LPAFNN
Sbjct: 23  NSLEPIMSEETIEYHWGKHHRTYVDNLNRQIDGTDLDGNSLEDTMVILYNKGDILPAFNN 82

Query: 120 AAQA----WNHEFFWGCMKPGGGGKPSGELLQLIERDFGSFKKFVEEFRSAAATQFGSGW 175
           AAQA    WNH+FFW  MKPGGGG+PSGELL+LIERDFGS KKF++EF++AA+ QFGSGW
Sbjct: 83  AAQACMLAWNHDFFWESMKPGGGGRPSGELLKLIERDFGSLKKFLDEFKTAASAQFGSGW 142

Query: 176 AWLAYKANRLNVENA 190
           AWLAYK +RL+V N 
Sbjct: 143 AWLAYKESRLDVGNV 157


>Glyma20g33880.1 
          Length = 177

 Score =  180 bits (456), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 93/133 (69%), Positives = 109/133 (81%), Gaps = 10/133 (7%)

Query: 46  VTAKFELKPPPYPLNALEPHMSKDTLEYHWGKHHRAYVDNLNKQIVGTELDSLPLEDVVI 105
           V AKFELKPPPYPLN LEP MS+ TLE+HWGKHH+ YV+NL KQ+VGTELD   LE++++
Sbjct: 4   VNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTELDGKSLEEIIV 63

Query: 106 VTYNKGDVLPAFNNAAQAWNHEFFWGCMKPGGGGKPSGELLQLIERDFGSFKKFVEEFRS 165
            +YNK           Q WNH+FFW CMKPGGGGKPSGELL+LIERDFGSF KF++EF++
Sbjct: 64  TSYNK----------VQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKFLDEFKA 113

Query: 166 AAATQFGSGWAWL 178
           AAATQFGSGWAWL
Sbjct: 114 AAATQFGSGWAWL 126


>Glyma20g12510.1 
          Length = 262

 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 111/175 (63%), Gaps = 5/175 (2%)

Query: 19  HGGLSRTTSAFKWRKERHVRRQTG----SAIVTAKFELKPPPYPLNALEPHMSKDTLEYH 74
           H  L+  +  FK  K  H +++      S+ + A + L  PPY L+ALEP+MSK T++ H
Sbjct: 14  HLILADLSRQFKIPKLLHRKKRFDGSPRSSKIAAFYGLTTPPYELDALEPYMSKRTIDMH 73

Query: 75  WGKHHRAYVDNLNKQIVGTE-LDSLPLEDVVIVTYNKGDVLPAFNNAAQAWNHEFFWGCM 133
           WG++H+ +++ LNKQ+   + L    L+++V VTYN G+ LP FNNAA+ WNH+FFW  M
Sbjct: 74  WGEYHQNFIEGLNKQLEKDDILYGYTLDELVKVTYNNGNPLPEFNNAAEVWNHDFFWESM 133

Query: 134 KPGGGGKPSGELLQLIERDFGSFKKFVEEFRSAAATQFGSGWAWLAYKANRLNVE 188
           +PGGG  P   LLQ IE+DFGSF  F E+F  AA + FGSGW WL  K     +E
Sbjct: 134 QPGGGDMPKLGLLQQIEKDFGSFTNFREKFIGAALSLFGSGWVWLVLKREEKRLE 188


>Glyma06g14960.1 
          Length = 241

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 9/144 (6%)

Query: 50  FELKPPPYPLNALEPHMSKDTLEYHWGKHHRAYVDNLNKQIVGTELDSLPLEDVVIVTYN 109
           + L    Y   ALEP +S D ++ H  KHH+ Y+ N NK +   + D++  +D   V   
Sbjct: 41  YTLPDLDYDYGALEPAISGDIMQLHHQKHHQTYITNYNKALEQLQ-DAIAKKDSSAVVKL 99

Query: 110 KGDVLPAFNNAAQAWNHEFFWGCMKP---GGGGKPSGELLQLIERDFGSFKKFVEEFRSA 166
           +G +   FN      NH  FW  + P   GGG  P G L   I+  FGSF+  +++  + 
Sbjct: 100 QGAI--KFNGGGHV-NHSIFWKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALIQKVNAE 156

Query: 167 AATQFGSGWAWLAY--KANRLNVE 188
            A   GSGW WL    +  RL VE
Sbjct: 157 GAALQGSGWVWLGLDKELKRLVVE 180


>Glyma04g39930.1 
          Length = 240

 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 9/144 (6%)

Query: 50  FELKPPPYPLNALEPHMSKDTLEYHWGKHHRAYVDNLNKQIVGTELDSLPLEDVVIVTYN 109
           + L    Y   ALEP +S + ++ H  KHH+ Y+ N NK +   + D++  +D   V   
Sbjct: 40  YTLPDLDYDYGALEPAISGEIMQLHHQKHHQTYITNFNKALEQLQ-DAVAKKDSSAVVKL 98

Query: 110 KGDVLPAFNNAAQAWNHEFFWGCMKP---GGGGKPSGELLQLIERDFGSFKKFVEEFRSA 166
           +G +   FN      NH  FW  + P   GGG  P G L   I+  FGSF+  V++  + 
Sbjct: 99  QGAI--KFNGGGHV-NHSIFWKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALVQKVNAE 155

Query: 167 AATQFGSGWAWLAY--KANRLNVE 188
            A   GSGW WL    +  RL VE
Sbjct: 156 GAALQGSGWVWLGLDKELKRLVVE 179


>Glyma04g39930.2 
          Length = 183

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 16/164 (9%)

Query: 22  LSRTTSAFKWRKERHVRRQTGSAIVTAK-------FELKPPPYPLNALEPHMSKDTLEYH 74
           L+R T A   R +   +   G+ I  A        + L    Y   ALEP +S + ++ H
Sbjct: 7   LTRKTLATVLRND--AKPIIGAGIAAATHSRGLHVYTLPDLDYDYGALEPAISGEIMQLH 64

Query: 75  WGKHHRAYVDNLNKQIVGTELDSLPLEDVVIVTYNKGDVLPAFNNAAQAWNHEFFWGCMK 134
             KHH+ Y+ N NK +   + D++  +D   V   +G +   FN      NH  FW  + 
Sbjct: 65  HQKHHQTYITNFNKALEQLQ-DAVAKKDSSAVVKLQGAI--KFNGGGHV-NHSIFWKNLA 120

Query: 135 P---GGGGKPSGELLQLIERDFGSFKKFVEEFRSAAATQFGSGW 175
           P   GGG  P G L   I+  FGSF+  V++  +  A   GSGW
Sbjct: 121 PVREGGGEPPKGSLGWAIDTHFGSFEALVQKVNAEGAALQGSGW 164