Jatropha Genome Database

JcCB0008751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008751.10 - phase: 0 /pseudo/partial
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g05960.1                                                       220   5e-58
Glyma17g20020.1                                                       216   1e-56
Glyma01g39310.1                                                       206   8e-54
Glyma09g00260.1                                                       154   4e-38
Glyma09g00260.2                                                       154   5e-38
Glyma09g00260.3                                                       154   5e-38
Glyma12g36920.1                                                       133   9e-32

>Glyma11g05960.1 
          Length = 654

 Score =  220 bits (561), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 115/173 (66%), Positives = 130/173 (75%), Gaps = 25/173 (14%)

Query: 16  SKQRKSXILSATGGIEGLVFALATRRKDFEVLVFXK------------------------ 51
           S+++K  +L A GGI GLVFALA +RK FEV+VF K                        
Sbjct: 67  SQKKKLRVLVAGGGIGGLVFALAAKRKGFEVVVFEKDMSAIRGEGQYRGPIQIQSNALAA 126

Query: 52  -EAIDLEVAEEVMEAGCVTGDRINGLVDGVSGTWYVKFDTFTPAAERGLPVTRVISRMTL 110
            EAIDLEVAEEV+  GC+TGDRINGLVDG+SG+WY+KFDTFTPAAERGLPVTRVISRM L
Sbjct: 127 LEAIDLEVAEEVLRVGCITGDRINGLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMAL 186

Query: 111 QQILALAVGEDVIRNESNVVSFQDDGDKVTVTLENGQHFEGDLLVGADGIWSK 163
           Q+ILA AVGEDVI N+SNVV F D GDKVTV LENGQ ++GDLLVGADGIWSK
Sbjct: 187 QEILAHAVGEDVIMNDSNVVDFVDHGDKVTVELENGQKYDGDLLVGADGIWSK 239


>Glyma17g20020.1 
          Length = 669

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 113/166 (68%), Positives = 124/166 (74%), Gaps = 25/166 (15%)

Query: 23  ILSATGGIEGLVFALATRRKDFEVLVFXK-------------------------EAIDLE 57
           IL A GGI GLVFALA +RK FEV+VF K                         EAID E
Sbjct: 89  ILVAGGGIGGLVFALAAKRKGFEVMVFEKDLSAIRGEGQYRGPIQIQSNALAALEAIDSE 148

Query: 58  VAEEVMEAGCVTGDRINGLVDGVSGTWYVKFDTFTPAAERGLPVTRVISRMTLQQILALA 117
           VA+EVM  GC+TGDRINGLVDGVSG+WYVKFDTFTPA ERGLPVTRVISRM LQ+ILA A
Sbjct: 149 VADEVMRVGCITGDRINGLVDGVSGSWYVKFDTFTPAVERGLPVTRVISRMVLQEILARA 208

Query: 118 VGEDVIRNESNVVSFQDDGDKVTVTLENGQHFEGDLLVGADGIWSK 163
           VGED+I N SNVV+F DDG+KVTV LENGQ +EGD+LVGADGIWSK
Sbjct: 209 VGEDIIMNASNVVNFVDDGNKVTVELENGQKYEGDVLVGADGIWSK 254


>Glyma01g39310.1 
          Length = 564

 Score =  206 bits (525), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 108/150 (72%), Positives = 117/150 (78%), Gaps = 12/150 (8%)

Query: 26  ATGGIEGLVFALATRRKDFEVLVFXK------------EAIDLEVAEEVMEAGCVTGDRI 73
           A GGI GLVFALA +RK FEV  +              EAIDLEVAEEVM AGC+T DRI
Sbjct: 93  AGGGIGGLVFALAAKRKGFEVGQYRGPIQIQSNASADLEAIDLEVAEEVMRAGCITDDRI 152

Query: 74  NGLVDGVSGTWYVKFDTFTPAAERGLPVTRVISRMTLQQILALAVGEDVIRNESNVVSFQ 133
           NGLVDG+SG+WY+KFDTFTPAAERGLPVTRVISRMTLQ ILA AVGED I N+SNVV F 
Sbjct: 153 NGLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMTLQDILARAVGEDAIMNDSNVVDFV 212

Query: 134 DDGDKVTVTLENGQHFEGDLLVGADGIWSK 163
           D G KVTV LEN Q ++GDLLVGADGIWSK
Sbjct: 213 DHGGKVTVELENVQKYDGDLLVGADGIWSK 242


>Glyma09g00260.1 
          Length = 478

 Score =  154 bits (390), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 107/174 (61%), Gaps = 25/174 (14%)

Query: 15  QSKQRKSXILSATGGIEGLVFALATRRKDFEVLVFXK----------------------- 51
           + ++RK  +L A GGI GLV ALA + + +EV VF K                       
Sbjct: 58  EEEKRKLRVLVAGGGIGGLVLALAAKHRGYEVKVFEKDLSAVRGEGRHRGPIQLLSGALA 117

Query: 52  --EAIDLEVAEEVMEAGCVTGDRINGLVDGVSGTWYVKFDTFTPAAERGLPVTRVISRMT 109
             E ID  VA ++MEAGCVT +R NGL DG+SG W+  FD FTPA+ + LP+T VI RM 
Sbjct: 118 VLETIDQSVARQIMEAGCVTANRTNGLADGLSGDWFSVFDLFTPASRKRLPLTLVICRMA 177

Query: 110 LQQILALAVGEDVIRNESNVVSFQDDGDKVTVTLENGQHFEGDLLVGADGIWSK 163
           LQ IL   VG ++IRN+S VV F  + +KV V LENG+  +GD+L+GADGIWS+
Sbjct: 178 LQDILVNKVGSNIIRNKSKVVDFIQEPNKVRVILENGEQHDGDILIGADGIWSE 231


>Glyma09g00260.2 
          Length = 477

 Score =  154 bits (390), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 107/174 (61%), Gaps = 25/174 (14%)

Query: 15  QSKQRKSXILSATGGIEGLVFALATRRKDFEVLVFXK----------------------- 51
           + ++RK  +L A GGI GLV ALA + + +EV VF K                       
Sbjct: 58  EEEKRKLRVLVAGGGIGGLVLALAAKHRGYEVKVFEKDLSAVRGEGRHRGPIQLLSGALA 117

Query: 52  --EAIDLEVAEEVMEAGCVTGDRINGLVDGVSGTWYVKFDTFTPAAERGLPVTRVISRMT 109
             E ID  VA ++MEAGCVT +R NGL DG+SG W+  FD FTPA+ + LP+T VI RM 
Sbjct: 118 VLETIDQSVARQIMEAGCVTANRTNGLADGLSGDWFSVFDLFTPASRKRLPLTLVICRMA 177

Query: 110 LQQILALAVGEDVIRNESNVVSFQDDGDKVTVTLENGQHFEGDLLVGADGIWSK 163
           LQ IL   VG ++IRN+S VV F  + +KV V LENG+  +GD+L+GADGIWS+
Sbjct: 178 LQDILVNKVGSNIIRNKSKVVDFIQEPNKVRVILENGEQHDGDILIGADGIWSE 231


>Glyma09g00260.3 
          Length = 472

 Score =  154 bits (389), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 107/174 (61%), Gaps = 25/174 (14%)

Query: 15  QSKQRKSXILSATGGIEGLVFALATRRKDFEVLVFXK----------------------- 51
           + ++RK  +L A GGI GLV ALA + + +EV VF K                       
Sbjct: 58  EEEKRKLRVLVAGGGIGGLVLALAAKHRGYEVKVFEKDLSAVRGEGRHRGPIQLLSGALA 117

Query: 52  --EAIDLEVAEEVMEAGCVTGDRINGLVDGVSGTWYVKFDTFTPAAERGLPVTRVISRMT 109
             E ID  VA ++MEAGCVT +R NGL DG+SG W+  FD FTPA+ + LP+T VI RM 
Sbjct: 118 VLETIDQSVARQIMEAGCVTANRTNGLADGLSGDWFSVFDLFTPASRKRLPLTLVICRMA 177

Query: 110 LQQILALAVGEDVIRNESNVVSFQDDGDKVTVTLENGQHFEGDLLVGADGIWSK 163
           LQ IL   VG ++IRN+S VV F  + +KV V LENG+  +GD+L+GADGIWS+
Sbjct: 178 LQDILVNKVGSNIIRNKSKVVDFIQEPNKVRVILENGEQHDGDILIGADGIWSE 231


>Glyma12g36920.1 
          Length = 206

 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 104/190 (54%), Gaps = 43/190 (22%)

Query: 17  KQRKSXILSATGGIEGLVFALATRRKDFEVLVFXK------------------------- 51
           K++K  +L   GGI GLV ALA + + +EV VF K                         
Sbjct: 2   KKKKLRVLVDGGGIGGLVLALAAKHRGYEVKVFEKDLSAVRGEGRHRGPIQLLSIALAVL 61

Query: 52  EAIDLEVAEEVMEAGCVTGDRINGLVD------------------GVSGTWYVKFDTFTP 93
           EAID  VA ++MEAG VTG+R NGL D                   + G  +  FD FTP
Sbjct: 62  EAIDQRVARQIMEAGRVTGNRTNGLADVFCEVLDFIAIFCILRISNMEGAGFSVFDLFTP 121

Query: 94  AAERGLPVTRVISRMTLQQILALAVGEDVIRNESNVVSFQDDGDKVTVTLENGQHFEGDL 153
           A+ + LP+T VI RM LQ IL  AVG +++RN+S VV F  +  K+ V LENG+H +GD+
Sbjct: 122 ASRKRLPLTLVICRMALQDILVNAVGSNILRNKSKVVDFIQEPSKIRVILENGEHHDGDI 181

Query: 154 LVGADGIWSK 163
           L+GADGIWS+
Sbjct: 182 LIGADGIWSE 191