Jatropha Genome Database

JcCB0008631.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008631.30 + phase: 0 /partial
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g07550.1                                                       211   6e-55
Glyma14g37390.1                                                       185   3e-47
Glyma02g39270.1                                                       176   2e-44

>Glyma03g07550.1 
          Length = 285

 Score =  211 bits (536), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 109/197 (55%), Positives = 132/197 (67%), Gaps = 8/197 (4%)

Query: 1   MDRSQXXXXXXXXXXXXTDIVNLFTIQPPPKPALNDYNIIXXXXXXXXXXXXXXXXXXXX 60
           MDR+Q            +DI+NLF+ QP PKP  +    I                    
Sbjct: 58  MDRTQILLVGLPIFLFFSDILNLFSPQPSPKPTHHHLPPIHPKPHPQPHLQQPL------ 111

Query: 61  XKSPSMAIGGLGDTGTGSTVNIDFCASCSYRGTAITMKNMLETQFPGINIVLANYPPSLP 120
            + P+    G+G  G G+TV+IDFC SCSY+G A+T+KNMLE++FPGIN+VLANYPP LP
Sbjct: 112 -EFPTQKQSGIGLIGIGNTVSIDFCTSCSYKGNAVTVKNMLESEFPGINVVLANYPPPLP 170

Query: 121 KRLLSKVVPVFQFGIIGLIMGGEQIFPKLGFAVPPSWYYSLRANRFGSIASTWLFGNFIQ 180
           KR+L KVVPV Q GII  I+ G+QIFP+LG   PP WYYSLRAN+F SIASTWL  NF+Q
Sbjct: 171 KRILGKVVPVVQTGIIVAIVAGDQIFPRLGIT-PPPWYYSLRANKFRSIASTWLLTNFLQ 229

Query: 181 SFLQSSGAFEVYCNGEL 197
           SFLQSSGAFEVYCNG+L
Sbjct: 230 SFLQSSGAFEVYCNGDL 246


>Glyma14g37390.1 
          Length = 287

 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 91/134 (67%), Positives = 109/134 (81%)

Query: 64  PSMAIGGLGDTGTGSTVNIDFCASCSYRGTAITMKNMLETQFPGINIVLANYPPSLPKRL 123
           P      +   G G+TV+I+FC+SCSY+GTA+TMKNMLE  FPG  ++LANYPP+LPKRL
Sbjct: 116 PEKPTNNIATPGLGNTVHINFCSSCSYKGTAVTMKNMLEIAFPGTEVILANYPPTLPKRL 175

Query: 124 LSKVVPVFQFGIIGLIMGGEQIFPKLGFAVPPSWYYSLRANRFGSIASTWLFGNFIQSFL 183
           LSK+VPV Q G+IG+++ GE IFP LGF  PP WYY+LRANRFG+IASTWL GN +QSFL
Sbjct: 176 LSKLVPVVQIGVIGVVVAGEHIFPMLGFVAPPPWYYNLRANRFGTIASTWLLGNALQSFL 235

Query: 184 QSSGAFEVYCNGEL 197
           QSSGAFEVY NGEL
Sbjct: 236 QSSGAFEVYFNGEL 249


>Glyma02g39270.1 
          Length = 267

 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/134 (67%), Positives = 108/134 (80%)

Query: 64  PSMAIGGLGDTGTGSTVNIDFCASCSYRGTAITMKNMLETQFPGINIVLANYPPSLPKRL 123
           P   I  +   G G+TV I+FC+SCSY+GTA+TMKNMLE   PG  ++LANYPPSLPKRL
Sbjct: 96  PEKPISNIATPGLGNTVYINFCSSCSYKGTAVTMKNMLEIALPGTEVILANYPPSLPKRL 155

Query: 124 LSKVVPVFQFGIIGLIMGGEQIFPKLGFAVPPSWYYSLRANRFGSIASTWLFGNFIQSFL 183
           LSK+VPV Q G++G+++ GE IFP LGF  PP WYY+LRANRFG+IASTWL GN +QSFL
Sbjct: 156 LSKLVPVVQIGVVGVVVAGEHIFPMLGFVAPPPWYYNLRANRFGTIASTWLLGNALQSFL 215

Query: 184 QSSGAFEVYCNGEL 197
           QSSGAFE+Y NGEL
Sbjct: 216 QSSGAFEIYFNGEL 229