Jatropha Genome Database

JcCB0008631.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008631.20 + phase: 0 /partial
         (245 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g05630.1                                                        66   4e-11
Glyma07g38450.1                                                        62   6e-10
Glyma09g38050.2                                                        53   2e-07
Glyma09g38050.1                                                        53   2e-07
Glyma18g48340.1                                                        51   1e-06

>Glyma08g05630.1 
          Length = 313

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 70/163 (42%), Gaps = 43/163 (26%)

Query: 51  NTRSIHKLYRNGIXXXXXXXXXXXXXXXXXXXXFRIRIPTEVSIAQ---PGP--KFYAKV 105
           +TRS++KLYRN                      FRIRIPT +S  Q   PG   K + KV
Sbjct: 176 HTRSLNKLYRN-----------GFPGSGGGAGGFRIRIPTGLSAPQQQHPGSASKVFGKV 224

Query: 106 -DQKYTGXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXDEIGKKREREPMEEMVAAVK 164
            +Q+++                                    +GKKRER+P+ E+VAA+K
Sbjct: 225 GNQRFS--------------------------PNLNQNPNPNLGKKRERDPVGEVVAAIK 258

Query: 165 VLGDGFVRMEQMKXXXXXXXXXXXXXXXXXXXXXILESQQHIV 207
           VLGDGFVRMEQMK                     ILESQQ IV
Sbjct: 259 VLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIV 301


>Glyma07g38450.1 
          Length = 138

 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 52/124 (41%), Gaps = 26/124 (20%)

Query: 84  FRIRIPTEVSIAQPGPKFYAKVDQKYTGXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXX 143
           FRIRIPT +   QPG       +QK++                                 
Sbjct: 18  FRIRIPTGLGTVQPGSGSKVFGNQKFS--------------------------PNLNQNP 51

Query: 144 XDEIGKKREREPMEEMVAAVKVLGDGFVRMEQMKXXXXXXXXXXXXXXXXXXXXXILESQ 203
              +G KRER+P+ E+VAA+KVLGDGFVR EQMK                     ILESQ
Sbjct: 52  NPNLGNKRERDPVGELVAAIKVLGDGFVRTEQMKMEMAREIETMRMEMEMKRTEMILESQ 111

Query: 204 QHIV 207
           Q IV
Sbjct: 112 QRIV 115


>Glyma09g38050.2 
          Length = 322

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 38/85 (44%)

Query: 147 IGKKREREPMEEMVAAVKVLGDGFVRMEQMKXXXXXXXXXXXXXXXXXXXXXILESQQHI 206
           + ++RER+ + EMV A+KVL DGFVRMEQMK                     IL+SQQ I
Sbjct: 238 VKRERERDAVAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRI 297

Query: 207 VXXXXXXXXXXXXXXXXNPVHVSQP 231
           V                 P   SQP
Sbjct: 298 VEAFARAVSQKRTKGKSTPSPSSQP 322


>Glyma09g38050.1 
          Length = 322

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 38/85 (44%)

Query: 147 IGKKREREPMEEMVAAVKVLGDGFVRMEQMKXXXXXXXXXXXXXXXXXXXXXILESQQHI 206
           + ++RER+ + EMV A+KVL DGFVRMEQMK                     IL+SQQ I
Sbjct: 238 VKRERERDAVAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRI 297

Query: 207 VXXXXXXXXXXXXXXXXNPVHVSQP 231
           V                 P   SQP
Sbjct: 298 VEAFARAVSQKRTKGKSTPSPSSQP 322


>Glyma18g48340.1 
          Length = 270

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 38/85 (44%)

Query: 147 IGKKREREPMEEMVAAVKVLGDGFVRMEQMKXXXXXXXXXXXXXXXXXXXXXILESQQHI 206
           + ++RER+ + EMV A+KVL DGFVRMEQMK                     IL+SQQ I
Sbjct: 186 VKRERERDAVAEMVEAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRI 245

Query: 207 VXXXXXXXXXXXXXXXXNPVHVSQP 231
           V                 P   SQP
Sbjct: 246 VEAFAMAVSQKRSKGKSTPSPSSQP 270